GO Enrichment Analysis of Co-expressed Genes with
AT1G62640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015843: methylammonium transport | 0.00E+00 |
| 2 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
| 3 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 4 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
| 5 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
| 6 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 7 | GO:0043087: regulation of GTPase activity | 1.20E-04 |
| 8 | GO:0006264: mitochondrial DNA replication | 1.20E-04 |
| 9 | GO:0033259: plastid DNA replication | 1.20E-04 |
| 10 | GO:0010493: Lewis a epitope biosynthetic process | 1.20E-04 |
| 11 | GO:0046520: sphingoid biosynthetic process | 1.20E-04 |
| 12 | GO:0030244: cellulose biosynthetic process | 1.60E-04 |
| 13 | GO:0000160: phosphorelay signal transduction system | 1.72E-04 |
| 14 | GO:0031648: protein destabilization | 2.77E-04 |
| 15 | GO:0042550: photosystem I stabilization | 2.77E-04 |
| 16 | GO:0042853: L-alanine catabolic process | 2.77E-04 |
| 17 | GO:0010569: regulation of double-strand break repair via homologous recombination | 2.77E-04 |
| 18 | GO:0080175: phragmoplast microtubule organization | 2.77E-04 |
| 19 | GO:0031537: regulation of anthocyanin metabolic process | 2.77E-04 |
| 20 | GO:0009833: plant-type primary cell wall biogenesis | 3.68E-04 |
| 21 | GO:0019344: cysteine biosynthetic process | 4.09E-04 |
| 22 | GO:0031022: nuclear migration along microfilament | 4.58E-04 |
| 23 | GO:0051127: positive regulation of actin nucleation | 4.58E-04 |
| 24 | GO:0019419: sulfate reduction | 4.58E-04 |
| 25 | GO:0009736: cytokinin-activated signaling pathway | 4.63E-04 |
| 26 | GO:0051639: actin filament network formation | 6.57E-04 |
| 27 | GO:0015696: ammonium transport | 6.57E-04 |
| 28 | GO:0009165: nucleotide biosynthetic process | 8.72E-04 |
| 29 | GO:0051764: actin crosslink formation | 8.72E-04 |
| 30 | GO:0072488: ammonium transmembrane transport | 8.72E-04 |
| 31 | GO:0010583: response to cyclopentenone | 1.04E-03 |
| 32 | GO:0009904: chloroplast accumulation movement | 1.10E-03 |
| 33 | GO:0051225: spindle assembly | 1.10E-03 |
| 34 | GO:0071368: cellular response to cytokinin stimulus | 1.10E-03 |
| 35 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.35E-03 |
| 36 | GO:0006139: nucleobase-containing compound metabolic process | 1.35E-03 |
| 37 | GO:0009903: chloroplast avoidance movement | 1.61E-03 |
| 38 | GO:0080113: regulation of seed growth | 1.61E-03 |
| 39 | GO:0080036: regulation of cytokinin-activated signaling pathway | 1.61E-03 |
| 40 | GO:0042372: phylloquinone biosynthetic process | 1.61E-03 |
| 41 | GO:0009610: response to symbiotic fungus | 1.89E-03 |
| 42 | GO:0009832: plant-type cell wall biogenesis | 1.89E-03 |
| 43 | GO:0009735: response to cytokinin | 2.03E-03 |
| 44 | GO:0019375: galactolipid biosynthetic process | 2.19E-03 |
| 45 | GO:0006002: fructose 6-phosphate metabolic process | 2.50E-03 |
| 46 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.82E-03 |
| 47 | GO:0051865: protein autoubiquitination | 2.82E-03 |
| 48 | GO:0009638: phototropism | 3.16E-03 |
| 49 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.16E-03 |
| 50 | GO:0031425: chloroplast RNA processing | 3.16E-03 |
| 51 | GO:0000103: sulfate assimilation | 3.51E-03 |
| 52 | GO:0045036: protein targeting to chloroplast | 3.51E-03 |
| 53 | GO:0010192: mucilage biosynthetic process | 3.51E-03 |
| 54 | GO:0009299: mRNA transcription | 3.51E-03 |
| 55 | GO:0006535: cysteine biosynthetic process from serine | 3.51E-03 |
| 56 | GO:0045037: protein import into chloroplast stroma | 4.26E-03 |
| 57 | GO:0006006: glucose metabolic process | 4.64E-03 |
| 58 | GO:0030036: actin cytoskeleton organization | 4.64E-03 |
| 59 | GO:0009725: response to hormone | 4.64E-03 |
| 60 | GO:0051017: actin filament bundle assembly | 6.32E-03 |
| 61 | GO:0005992: trehalose biosynthetic process | 6.32E-03 |
| 62 | GO:0080147: root hair cell development | 6.32E-03 |
| 63 | GO:0006306: DNA methylation | 7.22E-03 |
| 64 | GO:0031408: oxylipin biosynthetic process | 7.22E-03 |
| 65 | GO:0006468: protein phosphorylation | 7.66E-03 |
| 66 | GO:0006730: one-carbon metabolic process | 7.69E-03 |
| 67 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 7.69E-03 |
| 68 | GO:0010082: regulation of root meristem growth | 8.18E-03 |
| 69 | GO:0010214: seed coat development | 8.66E-03 |
| 70 | GO:0040008: regulation of growth | 9.20E-03 |
| 71 | GO:0080022: primary root development | 9.68E-03 |
| 72 | GO:0006342: chromatin silencing | 1.02E-02 |
| 73 | GO:0007018: microtubule-based movement | 1.07E-02 |
| 74 | GO:0007166: cell surface receptor signaling pathway | 1.10E-02 |
| 75 | GO:0000302: response to reactive oxygen species | 1.18E-02 |
| 76 | GO:0031047: gene silencing by RNA | 1.24E-02 |
| 77 | GO:0009826: unidimensional cell growth | 1.44E-02 |
| 78 | GO:0042254: ribosome biogenesis | 1.52E-02 |
| 79 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.92E-02 |
| 80 | GO:0006499: N-terminal protein myristoylation | 1.99E-02 |
| 81 | GO:0006865: amino acid transport | 2.12E-02 |
| 82 | GO:0009853: photorespiration | 2.19E-02 |
| 83 | GO:0009867: jasmonic acid mediated signaling pathway | 2.19E-02 |
| 84 | GO:0006897: endocytosis | 2.48E-02 |
| 85 | GO:0006631: fatty acid metabolic process | 2.48E-02 |
| 86 | GO:0016310: phosphorylation | 2.61E-02 |
| 87 | GO:0009640: photomorphogenesis | 2.63E-02 |
| 88 | GO:0071555: cell wall organization | 2.67E-02 |
| 89 | GO:0008643: carbohydrate transport | 2.78E-02 |
| 90 | GO:0006260: DNA replication | 3.01E-02 |
| 91 | GO:0009664: plant-type cell wall organization | 3.09E-02 |
| 92 | GO:0009809: lignin biosynthetic process | 3.25E-02 |
| 93 | GO:0006486: protein glycosylation | 3.25E-02 |
| 94 | GO:0009585: red, far-red light phototransduction | 3.25E-02 |
| 95 | GO:0006096: glycolytic process | 3.66E-02 |
| 96 | GO:0048367: shoot system development | 3.74E-02 |
| 97 | GO:0009740: gibberellic acid mediated signaling pathway | 4.00E-02 |
| 98 | GO:0009624: response to nematode | 4.17E-02 |
| 99 | GO:0006396: RNA processing | 4.26E-02 |
| 100 | GO:0009742: brassinosteroid mediated signaling pathway | 4.35E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 2 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 3 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
| 4 | GO:0000156: phosphorelay response regulator activity | 7.64E-05 |
| 5 | GO:0046481: digalactosyldiacylglycerol synthase activity | 1.20E-04 |
| 6 | GO:0000170: sphingosine hydroxylase activity | 1.20E-04 |
| 7 | GO:0050139: nicotinate-N-glucosyltransferase activity | 1.20E-04 |
| 8 | GO:0046480: galactolipid galactosyltransferase activity | 1.20E-04 |
| 9 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 1.20E-04 |
| 10 | GO:0046920: alpha-(1->3)-fucosyltransferase activity | 1.20E-04 |
| 11 | GO:0050017: L-3-cyanoalanine synthase activity | 2.77E-04 |
| 12 | GO:0043425: bHLH transcription factor binding | 2.77E-04 |
| 13 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 2.77E-04 |
| 14 | GO:0042284: sphingolipid delta-4 desaturase activity | 2.77E-04 |
| 15 | GO:0009973: adenylyl-sulfate reductase activity | 2.77E-04 |
| 16 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 2.77E-04 |
| 17 | GO:0016760: cellulose synthase (UDP-forming) activity | 5.89E-04 |
| 18 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 6.57E-04 |
| 19 | GO:0035250: UDP-galactosyltransferase activity | 6.57E-04 |
| 20 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 8.72E-04 |
| 21 | GO:0008409: 5'-3' exonuclease activity | 8.72E-04 |
| 22 | GO:0008453: alanine-glyoxylate transaminase activity | 8.72E-04 |
| 23 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.10E-03 |
| 24 | GO:0016759: cellulose synthase activity | 1.17E-03 |
| 25 | GO:0008519: ammonium transmembrane transporter activity | 1.35E-03 |
| 26 | GO:0016208: AMP binding | 1.35E-03 |
| 27 | GO:0004124: cysteine synthase activity | 1.61E-03 |
| 28 | GO:0003872: 6-phosphofructokinase activity | 1.89E-03 |
| 29 | GO:0008173: RNA methyltransferase activity | 2.50E-03 |
| 30 | GO:0008417: fucosyltransferase activity | 2.82E-03 |
| 31 | GO:0004805: trehalose-phosphatase activity | 3.51E-03 |
| 32 | GO:0004713: protein tyrosine kinase activity | 3.51E-03 |
| 33 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.88E-03 |
| 34 | GO:0003777: microtubule motor activity | 4.35E-03 |
| 35 | GO:0004089: carbonate dehydratase activity | 4.64E-03 |
| 36 | GO:0003887: DNA-directed DNA polymerase activity | 5.88E-03 |
| 37 | GO:0005345: purine nucleobase transmembrane transporter activity | 6.76E-03 |
| 38 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 7.22E-03 |
| 39 | GO:0030170: pyridoxal phosphate binding | 7.75E-03 |
| 40 | GO:0003727: single-stranded RNA binding | 8.66E-03 |
| 41 | GO:0008514: organic anion transmembrane transporter activity | 8.66E-03 |
| 42 | GO:0004674: protein serine/threonine kinase activity | 8.86E-03 |
| 43 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 8.98E-03 |
| 44 | GO:0010181: FMN binding | 1.07E-02 |
| 45 | GO:0004672: protein kinase activity | 1.21E-02 |
| 46 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.30E-02 |
| 47 | GO:0051015: actin filament binding | 1.30E-02 |
| 48 | GO:0016757: transferase activity, transferring glycosyl groups | 1.38E-02 |
| 49 | GO:0016301: kinase activity | 1.63E-02 |
| 50 | GO:0005096: GTPase activator activity | 1.92E-02 |
| 51 | GO:0003746: translation elongation factor activity | 2.19E-02 |
| 52 | GO:0050661: NADP binding | 2.41E-02 |
| 53 | GO:0044212: transcription regulatory region DNA binding | 2.67E-02 |
| 54 | GO:0043621: protein self-association | 2.78E-02 |
| 55 | GO:0035091: phosphatidylinositol binding | 2.78E-02 |
| 56 | GO:0009055: electron carrier activity | 2.94E-02 |
| 57 | GO:0015171: amino acid transmembrane transporter activity | 3.49E-02 |
| 58 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.91E-02 |
| 59 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.91E-02 |
| 60 | GO:0016874: ligase activity | 4.00E-02 |
| 61 | GO:0003779: actin binding | 4.09E-02 |
| 62 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.99E-02 |