GO Enrichment Analysis of Co-expressed Genes with
AT1G61900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 2 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 3 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 4 | GO:0033206: meiotic cytokinesis | 0.00E+00 |
| 5 | GO:0008064: regulation of actin polymerization or depolymerization | 0.00E+00 |
| 6 | GO:0051493: regulation of cytoskeleton organization | 0.00E+00 |
| 7 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 8 | GO:1905615: positive regulation of developmental vegetative growth | 0.00E+00 |
| 9 | GO:0071249: cellular response to nitrate | 3.37E-06 |
| 10 | GO:2000033: regulation of seed dormancy process | 1.27E-05 |
| 11 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 2.31E-05 |
| 12 | GO:0043971: histone H3-K18 acetylation | 5.64E-05 |
| 13 | GO:0007093: mitotic cell cycle checkpoint | 5.64E-05 |
| 14 | GO:0036228: protein targeting to nuclear inner membrane | 5.64E-05 |
| 15 | GO:0006999: nuclear pore organization | 5.64E-05 |
| 16 | GO:0051304: chromosome separation | 1.37E-04 |
| 17 | GO:0009863: salicylic acid mediated signaling pathway | 1.46E-04 |
| 18 | GO:0010187: negative regulation of seed germination | 1.46E-04 |
| 19 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.46E-04 |
| 20 | GO:0009740: gibberellic acid mediated signaling pathway | 1.80E-04 |
| 21 | GO:0071705: nitrogen compound transport | 2.34E-04 |
| 22 | GO:0010589: leaf proximal/distal pattern formation | 2.34E-04 |
| 23 | GO:0010305: leaf vascular tissue pattern formation | 3.02E-04 |
| 24 | GO:0009855: determination of bilateral symmetry | 3.41E-04 |
| 25 | GO:0006168: adenine salvage | 3.41E-04 |
| 26 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 3.41E-04 |
| 27 | GO:0006166: purine ribonucleoside salvage | 3.41E-04 |
| 28 | GO:0006808: regulation of nitrogen utilization | 4.56E-04 |
| 29 | GO:1900864: mitochondrial RNA modification | 4.56E-04 |
| 30 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 4.56E-04 |
| 31 | GO:0009739: response to gibberellin | 4.68E-04 |
| 32 | GO:0010029: regulation of seed germination | 5.66E-04 |
| 33 | GO:0044209: AMP salvage | 5.78E-04 |
| 34 | GO:0009616: virus induced gene silencing | 5.78E-04 |
| 35 | GO:0009658: chloroplast organization | 7.02E-04 |
| 36 | GO:0042176: regulation of protein catabolic process | 7.07E-04 |
| 37 | GO:1901371: regulation of leaf morphogenesis | 7.07E-04 |
| 38 | GO:0035435: phosphate ion transmembrane transport | 7.07E-04 |
| 39 | GO:0010218: response to far red light | 7.61E-04 |
| 40 | GO:0080060: integument development | 8.44E-04 |
| 41 | GO:0010014: meristem initiation | 8.44E-04 |
| 42 | GO:0009955: adaxial/abaxial pattern specification | 8.44E-04 |
| 43 | GO:1901001: negative regulation of response to salt stress | 8.44E-04 |
| 44 | GO:0000911: cytokinesis by cell plate formation | 8.44E-04 |
| 45 | GO:0009867: jasmonic acid mediated signaling pathway | 8.69E-04 |
| 46 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 9.85E-04 |
| 47 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.13E-03 |
| 48 | GO:0010928: regulation of auxin mediated signaling pathway | 1.13E-03 |
| 49 | GO:0001510: RNA methylation | 1.29E-03 |
| 50 | GO:0010233: phloem transport | 1.29E-03 |
| 51 | GO:0006261: DNA-dependent DNA replication | 1.29E-03 |
| 52 | GO:0044030: regulation of DNA methylation | 1.29E-03 |
| 53 | GO:0010093: specification of floral organ identity | 1.29E-03 |
| 54 | GO:0042538: hyperosmotic salinity response | 1.37E-03 |
| 55 | GO:0048507: meristem development | 1.45E-03 |
| 56 | GO:0000373: Group II intron splicing | 1.45E-03 |
| 57 | GO:0006607: NLS-bearing protein import into nucleus | 1.45E-03 |
| 58 | GO:0030422: production of siRNA involved in RNA interference | 1.79E-03 |
| 59 | GO:0010072: primary shoot apical meristem specification | 1.97E-03 |
| 60 | GO:0015706: nitrate transport | 2.16E-03 |
| 61 | GO:0010152: pollen maturation | 2.16E-03 |
| 62 | GO:0010102: lateral root morphogenesis | 2.36E-03 |
| 63 | GO:0010020: chloroplast fission | 2.56E-03 |
| 64 | GO:0006270: DNA replication initiation | 2.56E-03 |
| 65 | GO:0080188: RNA-directed DNA methylation | 2.76E-03 |
| 66 | GO:0010167: response to nitrate | 2.76E-03 |
| 67 | GO:0000027: ribosomal large subunit assembly | 3.18E-03 |
| 68 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.18E-03 |
| 69 | GO:0010026: trichome differentiation | 3.40E-03 |
| 70 | GO:0007275: multicellular organism development | 4.06E-03 |
| 71 | GO:0010091: trichome branching | 4.34E-03 |
| 72 | GO:0048443: stamen development | 4.34E-03 |
| 73 | GO:0051028: mRNA transport | 4.58E-03 |
| 74 | GO:0080022: primary root development | 4.83E-03 |
| 75 | GO:0010501: RNA secondary structure unwinding | 4.83E-03 |
| 76 | GO:0008360: regulation of cell shape | 5.09E-03 |
| 77 | GO:0009958: positive gravitropism | 5.09E-03 |
| 78 | GO:0046323: glucose import | 5.09E-03 |
| 79 | GO:0002229: defense response to oomycetes | 5.88E-03 |
| 80 | GO:0007264: small GTPase mediated signal transduction | 6.15E-03 |
| 81 | GO:0009723: response to ethylene | 6.32E-03 |
| 82 | GO:0010090: trichome morphogenesis | 6.43E-03 |
| 83 | GO:0009651: response to salt stress | 9.12E-03 |
| 84 | GO:0048527: lateral root development | 1.01E-02 |
| 85 | GO:0009910: negative regulation of flower development | 1.01E-02 |
| 86 | GO:0009640: photomorphogenesis | 1.29E-02 |
| 87 | GO:0009965: leaf morphogenesis | 1.40E-02 |
| 88 | GO:0006260: DNA replication | 1.48E-02 |
| 89 | GO:0009909: regulation of flower development | 1.71E-02 |
| 90 | GO:0006396: RNA processing | 2.09E-02 |
| 91 | GO:0009058: biosynthetic process | 2.49E-02 |
| 92 | GO:0006355: regulation of transcription, DNA-templated | 2.66E-02 |
| 93 | GO:0009790: embryo development | 2.68E-02 |
| 94 | GO:0009414: response to water deprivation | 3.52E-02 |
| 95 | GO:0006970: response to osmotic stress | 4.34E-02 |
| 96 | GO:0016192: vesicle-mediated transport | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004808: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity | 0.00E+00 |
| 2 | GO:0000989: transcription factor activity, transcription factor binding | 3.71E-05 |
| 3 | GO:0003697: single-stranded DNA binding | 5.20E-05 |
| 4 | GO:0070181: small ribosomal subunit rRNA binding | 2.34E-04 |
| 5 | GO:0016805: dipeptidase activity | 2.34E-04 |
| 6 | GO:0004180: carboxypeptidase activity | 2.34E-04 |
| 7 | GO:0003999: adenine phosphoribosyltransferase activity | 3.41E-04 |
| 8 | GO:0003883: CTP synthase activity | 3.41E-04 |
| 9 | GO:0005354: galactose transmembrane transporter activity | 3.41E-04 |
| 10 | GO:0010385: double-stranded methylated DNA binding | 4.56E-04 |
| 11 | GO:0010011: auxin binding | 4.56E-04 |
| 12 | GO:0003688: DNA replication origin binding | 7.07E-04 |
| 13 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 9.43E-04 |
| 14 | GO:0017056: structural constituent of nuclear pore | 1.13E-03 |
| 15 | GO:0008173: RNA methyltransferase activity | 1.29E-03 |
| 16 | GO:0005487: nucleocytoplasmic transporter activity | 1.62E-03 |
| 17 | GO:0008171: O-methyltransferase activity | 1.79E-03 |
| 18 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.97E-03 |
| 19 | GO:0015114: phosphate ion transmembrane transporter activity | 2.36E-03 |
| 20 | GO:0003729: mRNA binding | 2.66E-03 |
| 21 | GO:0003723: RNA binding | 2.93E-03 |
| 22 | GO:0004402: histone acetyltransferase activity | 4.83E-03 |
| 23 | GO:0004527: exonuclease activity | 5.09E-03 |
| 24 | GO:0008080: N-acetyltransferase activity | 5.09E-03 |
| 25 | GO:0005355: glucose transmembrane transporter activity | 5.35E-03 |
| 26 | GO:0016759: cellulose synthase activity | 6.71E-03 |
| 27 | GO:0004004: ATP-dependent RNA helicase activity | 8.50E-03 |
| 28 | GO:0008236: serine-type peptidase activity | 8.81E-03 |
| 29 | GO:0042393: histone binding | 1.18E-02 |
| 30 | GO:0003690: double-stranded DNA binding | 1.63E-02 |
| 31 | GO:0016298: lipase activity | 1.63E-02 |
| 32 | GO:0016874: ligase activity | 1.96E-02 |
| 33 | GO:0008026: ATP-dependent helicase activity | 2.13E-02 |
| 34 | GO:0015144: carbohydrate transmembrane transporter activity | 2.73E-02 |
| 35 | GO:0005351: sugar:proton symporter activity | 2.97E-02 |
| 36 | GO:0003677: DNA binding | 3.14E-02 |