Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G61795

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070979: protein K11-linked ubiquitination0.00E+00
2GO:0071260: cellular response to mechanical stimulus0.00E+00
3GO:0043488: regulation of mRNA stability0.00E+00
4GO:0061157: mRNA destabilization0.00E+00
5GO:0090706: specification of plant organ position0.00E+00
6GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
7GO:0007037: vacuolar phosphate transport0.00E+00
8GO:0007638: mechanosensory behavior0.00E+00
9GO:0010068: protoderm histogenesis0.00E+00
10GO:0071311: cellular response to acetate0.00E+00
11GO:0015843: methylammonium transport0.00E+00
12GO:0046620: regulation of organ growth2.47E-05
13GO:0009733: response to auxin2.78E-05
14GO:0010158: abaxial cell fate specification1.96E-04
15GO:1902183: regulation of shoot apical meristem development1.96E-04
16GO:0006468: protein phosphorylation3.97E-04
17GO:0010450: inflorescence meristem growth4.76E-04
18GO:0051171: regulation of nitrogen compound metabolic process4.76E-04
19GO:0046520: sphingoid biosynthetic process4.76E-04
20GO:0006264: mitochondrial DNA replication4.76E-04
21GO:0033259: plastid DNA replication4.76E-04
22GO:0000066: mitochondrial ornithine transport4.76E-04
23GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.05E-04
24GO:2000024: regulation of leaf development8.70E-04
25GO:0015804: neutral amino acid transport1.02E-03
26GO:0009638: phototropism1.02E-03
27GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole1.02E-03
28GO:0010115: regulation of abscisic acid biosynthetic process1.02E-03
29GO:1900871: chloroplast mRNA modification1.02E-03
30GO:0006423: cysteinyl-tRNA aminoacylation1.02E-03
31GO:1900033: negative regulation of trichome patterning1.02E-03
32GO:0009786: regulation of asymmetric cell division1.02E-03
33GO:0031648: protein destabilization1.02E-03
34GO:0006816: calcium ion transport1.38E-03
35GO:0009740: gibberellic acid mediated signaling pathway1.64E-03
36GO:0051127: positive regulation of actin nucleation1.67E-03
37GO:0071230: cellular response to amino acid stimulus1.67E-03
38GO:0031145: anaphase-promoting complex-dependent catabolic process1.67E-03
39GO:0009150: purine ribonucleotide metabolic process1.67E-03
40GO:0051604: protein maturation1.67E-03
41GO:0016050: vesicle organization1.67E-03
42GO:0045165: cell fate commitment1.67E-03
43GO:0009767: photosynthetic electron transport chain1.79E-03
44GO:0009742: brassinosteroid mediated signaling pathway1.97E-03
45GO:0051513: regulation of monopolar cell growth2.42E-03
46GO:0007231: osmosensory signaling pathway2.42E-03
47GO:0030071: regulation of mitotic metaphase/anaphase transition2.42E-03
48GO:0051639: actin filament network formation2.42E-03
49GO:0044211: CTP salvage2.42E-03
50GO:0048645: animal organ formation2.42E-03
51GO:0010255: glucose mediated signaling pathway2.42E-03
52GO:0015696: ammonium transport2.42E-03
53GO:0046739: transport of virus in multicellular host2.42E-03
54GO:0032981: mitochondrial respiratory chain complex I assembly2.42E-03
55GO:0006164: purine nucleotide biosynthetic process2.42E-03
56GO:2000904: regulation of starch metabolic process2.42E-03
57GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.42E-03
58GO:0009067: aspartate family amino acid biosynthetic process2.42E-03
59GO:0009944: polarity specification of adaxial/abaxial axis2.80E-03
60GO:0010187: negative regulation of seed germination2.80E-03
61GO:0005992: trehalose biosynthetic process2.80E-03
62GO:0051764: actin crosslink formation3.26E-03
63GO:0072488: ammonium transmembrane transport3.26E-03
64GO:0022622: root system development3.26E-03
65GO:0033500: carbohydrate homeostasis3.26E-03
66GO:0044206: UMP salvage3.26E-03
67GO:0009165: nucleotide biosynthetic process3.26E-03
68GO:0048629: trichome patterning3.26E-03
69GO:0006839: mitochondrial transport3.30E-03
70GO:0040008: regulation of growth3.88E-03
71GO:0032876: negative regulation of DNA endoreduplication4.18E-03
72GO:0045038: protein import into chloroplast thylakoid membrane4.18E-03
73GO:0006855: drug transmembrane transport4.71E-03
74GO:0007166: cell surface receptor signaling pathway5.11E-03
75GO:0009959: negative gravitropism5.18E-03
76GO:0006655: phosphatidylglycerol biosynthetic process5.18E-03
77GO:0006139: nucleobase-containing compound metabolic process5.18E-03
78GO:0045962: positive regulation of development, heterochronic5.18E-03
79GO:0006206: pyrimidine nucleobase metabolic process5.18E-03
80GO:0009117: nucleotide metabolic process5.18E-03
81GO:0018258: protein O-linked glycosylation via hydroxyproline5.18E-03
82GO:0000741: karyogamy5.18E-03
83GO:0006561: proline biosynthetic process5.18E-03
84GO:0010087: phloem or xylem histogenesis5.18E-03
85GO:0010405: arabinogalactan protein metabolic process5.18E-03
86GO:0009958: positive gravitropism5.59E-03
87GO:0042372: phylloquinone biosynthetic process6.24E-03
88GO:0030488: tRNA methylation6.24E-03
89GO:0009088: threonine biosynthetic process6.24E-03
90GO:0080086: stamen filament development6.24E-03
91GO:0010050: vegetative phase change7.39E-03
92GO:0032880: regulation of protein localization7.39E-03
93GO:0032502: developmental process7.39E-03
94GO:0010161: red light signaling pathway7.39E-03
95GO:0009610: response to symbiotic fungus7.39E-03
96GO:0009787: regulation of abscisic acid-activated signaling pathway8.60E-03
97GO:0009850: auxin metabolic process8.60E-03
98GO:0009690: cytokinin metabolic process8.60E-03
99GO:0010078: maintenance of root meristem identity8.60E-03
100GO:0009704: de-etiolation8.60E-03
101GO:0032875: regulation of DNA endoreduplication8.60E-03
102GO:0016310: phosphorylation8.67E-03
103GO:0030154: cell differentiation8.72E-03
104GO:0010099: regulation of photomorphogenesis9.88E-03
105GO:0006002: fructose 6-phosphate metabolic process9.88E-03
106GO:0009827: plant-type cell wall modification9.88E-03
107GO:0010497: plasmodesmata-mediated intercellular transport9.88E-03
108GO:0010100: negative regulation of photomorphogenesis9.88E-03
109GO:0006997: nucleus organization9.88E-03
110GO:0043562: cellular response to nitrogen levels9.88E-03
111GO:0010093: specification of floral organ identity9.88E-03
112GO:0009734: auxin-activated signaling pathway1.07E-02
113GO:0009051: pentose-phosphate shunt, oxidative branch1.12E-02
114GO:0051865: protein autoubiquitination1.12E-02
115GO:0006783: heme biosynthetic process1.12E-02
116GO:0000373: Group II intron splicing1.12E-02
117GO:0006189: 'de novo' IMP biosynthetic process1.12E-02
118GO:0000902: cell morphogenesis1.12E-02
119GO:1900865: chloroplast RNA modification1.26E-02
120GO:0010380: regulation of chlorophyll biosynthetic process1.26E-02
121GO:0071577: zinc II ion transmembrane transport1.26E-02
122GO:0000160: phosphorelay signal transduction system1.38E-02
123GO:0009299: mRNA transcription1.41E-02
124GO:0006535: cysteine biosynthetic process from serine1.41E-02
125GO:0009688: abscisic acid biosynthetic process1.41E-02
126GO:0048829: root cap development1.41E-02
127GO:0009641: shade avoidance1.41E-02
128GO:0048527: lateral root development1.52E-02
129GO:0009684: indoleacetic acid biosynthetic process1.56E-02
130GO:0010015: root morphogenesis1.56E-02
131GO:0009773: photosynthetic electron transport in photosystem I1.56E-02
132GO:0009089: lysine biosynthetic process via diaminopimelate1.56E-02
133GO:0006415: translational termination1.56E-02
134GO:0009750: response to fructose1.56E-02
135GO:0006865: amino acid transport1.59E-02
136GO:0006790: sulfur compound metabolic process1.72E-02
137GO:0016024: CDP-diacylglycerol biosynthetic process1.72E-02
138GO:0010582: floral meristem determinacy1.72E-02
139GO:0007623: circadian rhythm1.79E-02
140GO:0010588: cotyledon vascular tissue pattern formation1.88E-02
141GO:2000012: regulation of auxin polar transport1.88E-02
142GO:0009785: blue light signaling pathway1.88E-02
143GO:0010628: positive regulation of gene expression1.88E-02
144GO:0006006: glucose metabolic process1.88E-02
145GO:0030036: actin cytoskeleton organization1.88E-02
146GO:0009725: response to hormone1.88E-02
147GO:0006631: fatty acid metabolic process1.99E-02
148GO:0006897: endocytosis1.99E-02
149GO:0048467: gynoecium development2.05E-02
150GO:0009933: meristem structural organization2.05E-02
151GO:0009640: photomorphogenesis2.16E-02
152GO:0009926: auxin polar transport2.16E-02
153GO:0090351: seedling development2.23E-02
154GO:0010030: positive regulation of seed germination2.23E-02
155GO:0070588: calcium ion transmembrane transport2.23E-02
156GO:0009833: plant-type primary cell wall biogenesis2.41E-02
157GO:0019344: cysteine biosynthetic process2.59E-02
158GO:0007010: cytoskeleton organization2.59E-02
159GO:0051017: actin filament bundle assembly2.59E-02
160GO:0006418: tRNA aminoacylation for protein translation2.78E-02
161GO:0006874: cellular calcium ion homeostasis2.78E-02
162GO:0006825: copper ion transport2.78E-02
163GO:0009736: cytokinin-activated signaling pathway2.91E-02
164GO:0003333: amino acid transmembrane transport2.97E-02
165GO:0009658: chloroplast organization3.09E-02
166GO:2000022: regulation of jasmonic acid mediated signaling pathway3.17E-02
167GO:0035428: hexose transmembrane transport3.17E-02
168GO:0006730: one-carbon metabolic process3.17E-02
169GO:0031348: negative regulation of defense response3.17E-02
170GO:0010082: regulation of root meristem growth3.37E-02
171GO:0009686: gibberellin biosynthetic process3.37E-02
172GO:0048367: shoot system development3.55E-02
173GO:0010214: seed coat development3.58E-02
174GO:0019722: calcium-mediated signaling3.58E-02
175GO:0009723: response to ethylene3.71E-02
176GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.79E-02
177GO:0070417: cellular response to cold3.79E-02
178GO:0008284: positive regulation of cell proliferation3.79E-02
179GO:0042631: cellular response to water deprivation4.01E-02
180GO:0042335: cuticle development4.01E-02
181GO:0000271: polysaccharide biosynthetic process4.01E-02
182GO:0080022: primary root development4.01E-02
183GO:0034220: ion transmembrane transport4.01E-02
184GO:0045489: pectin biosynthetic process4.23E-02
185GO:0010154: fruit development4.23E-02
186GO:0010197: polar nucleus fusion4.23E-02
187GO:0010182: sugar mediated signaling pathway4.23E-02
188GO:0046323: glucose import4.23E-02
189GO:0009741: response to brassinosteroid4.23E-02
190GO:0006355: regulation of transcription, DNA-templated4.29E-02
191GO:0046777: protein autophosphorylation4.38E-02
192GO:0007018: microtubule-based movement4.45E-02
193GO:0009416: response to light stimulus4.68E-02
194GO:0048825: cotyledon development4.68E-02
195GO:0008654: phospholipid biosynthetic process4.68E-02
196GO:0009851: auxin biosynthetic process4.68E-02
197GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.91E-02
RankGO TermAdjusted P value
1GO:0019136: deoxynucleoside kinase activity0.00E+00
2GO:0010301: xanthoxin dehydrogenase activity0.00E+00
3GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
4GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity0.00E+00
5GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
6GO:0015276: ligand-gated ion channel activity0.00E+00
7GO:0004056: argininosuccinate lyase activity0.00E+00
8GO:0004674: protein serine/threonine kinase activity1.41E-04
9GO:0016301: kinase activity2.46E-04
10GO:0000170: sphingosine hydroxylase activity4.76E-04
11GO:0050139: nicotinate-N-glucosyltransferase activity4.76E-04
12GO:0008066: glutamate receptor activity4.76E-04
13GO:0005290: L-histidine transmembrane transporter activity4.76E-04
14GO:0004008: copper-exporting ATPase activity4.76E-04
15GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity4.76E-04
16GO:0010313: phytochrome binding4.76E-04
17GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.76E-04
18GO:0004675: transmembrane receptor protein serine/threonine kinase activity8.29E-04
19GO:0004672: protein kinase activity8.57E-04
20GO:0004817: cysteine-tRNA ligase activity1.02E-03
21GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.02E-03
22GO:0080097: L-tryptophan:pyruvate aminotransferase activity1.02E-03
23GO:0042284: sphingolipid delta-4 desaturase activity1.02E-03
24GO:0000064: L-ornithine transmembrane transporter activity1.02E-03
25GO:0015929: hexosaminidase activity1.02E-03
26GO:0004563: beta-N-acetylhexosaminidase activity1.02E-03
27GO:0015172: acidic amino acid transmembrane transporter activity1.02E-03
28GO:0050017: L-3-cyanoalanine synthase activity1.02E-03
29GO:0017118: lipoyltransferase activity1.02E-03
30GO:0043425: bHLH transcription factor binding1.02E-03
31GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity1.02E-03
32GO:0004805: trehalose-phosphatase activity1.19E-03
33GO:0005089: Rho guanyl-nucleotide exchange factor activity1.38E-03
34GO:0070330: aromatase activity1.67E-03
35GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity1.67E-03
36GO:0070180: large ribosomal subunit rRNA binding1.67E-03
37GO:0005262: calcium channel activity1.79E-03
38GO:0015238: drug transmembrane transporter activity2.20E-03
39GO:0015189: L-lysine transmembrane transporter activity2.42E-03
40GO:0004072: aspartate kinase activity2.42E-03
41GO:0015175: neutral amino acid transmembrane transporter activity2.42E-03
42GO:0035529: NADH pyrophosphatase activity2.42E-03
43GO:0015181: arginine transmembrane transporter activity2.42E-03
44GO:0017172: cysteine dioxygenase activity2.42E-03
45GO:0047627: adenylylsulfatase activity2.42E-03
46GO:0004845: uracil phosphoribosyltransferase activity3.26E-03
47GO:0004345: glucose-6-phosphate dehydrogenase activity3.26E-03
48GO:0008409: 5'-3' exonuclease activity3.26E-03
49GO:0080032: methyl jasmonate esterase activity3.26E-03
50GO:0019199: transmembrane receptor protein kinase activity3.26E-03
51GO:0005524: ATP binding3.95E-03
52GO:0016846: carbon-sulfur lyase activity4.18E-03
53GO:0016773: phosphotransferase activity, alcohol group as acceptor4.18E-03
54GO:0018685: alkane 1-monooxygenase activity4.18E-03
55GO:0043621: protein self-association4.28E-03
56GO:0004605: phosphatidate cytidylyltransferase activity5.18E-03
57GO:1990714: hydroxyproline O-galactosyltransferase activity5.18E-03
58GO:0016208: AMP binding5.18E-03
59GO:0016462: pyrophosphatase activity5.18E-03
60GO:0008519: ammonium transmembrane transporter activity5.18E-03
61GO:0004124: cysteine synthase activity6.24E-03
62GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity6.24E-03
63GO:0004849: uridine kinase activity6.24E-03
64GO:0003730: mRNA 3'-UTR binding6.24E-03
65GO:0003872: 6-phosphofructokinase activity7.39E-03
66GO:0019899: enzyme binding7.39E-03
67GO:0000156: phosphorelay response regulator activity7.88E-03
68GO:0016759: cellulose synthase activity8.39E-03
69GO:0005375: copper ion transmembrane transporter activity9.88E-03
70GO:0003747: translation release factor activity1.12E-02
71GO:0004713: protein tyrosine kinase activity1.41E-02
72GO:0008794: arsenate reductase (glutaredoxin) activity1.56E-02
73GO:0008327: methyl-CpG binding1.56E-02
74GO:0015297: antiporter activity1.68E-02
75GO:0004022: alcohol dehydrogenase (NAD) activity1.88E-02
76GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.88E-02
77GO:0004089: carbonate dehydratase activity1.88E-02
78GO:0008017: microtubule binding1.89E-02
79GO:0044212: transcription regulatory region DNA binding1.99E-02
80GO:0008083: growth factor activity2.05E-02
81GO:0004970: ionotropic glutamate receptor activity2.23E-02
82GO:0005217: intracellular ligand-gated ion channel activity2.23E-02
83GO:0051537: 2 iron, 2 sulfur cluster binding2.33E-02
84GO:0003887: DNA-directed DNA polymerase activity2.41E-02
85GO:0005385: zinc ion transmembrane transporter activity2.59E-02
86GO:0005528: FK506 binding2.59E-02
87GO:0005345: purine nucleobase transmembrane transporter activity2.78E-02
88GO:0008324: cation transmembrane transporter activity2.78E-02
89GO:0008168: methyltransferase activity2.95E-02
90GO:0035251: UDP-glucosyltransferase activity2.97E-02
91GO:0004176: ATP-dependent peptidase activity2.97E-02
92GO:0019706: protein-cysteine S-palmitoyltransferase activity2.97E-02
93GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.17E-02
94GO:0003777: microtubule motor activity3.22E-02
95GO:0015171: amino acid transmembrane transporter activity3.22E-02
96GO:0030570: pectate lyase activity3.37E-02
97GO:0016760: cellulose synthase (UDP-forming) activity3.37E-02
98GO:0008514: organic anion transmembrane transporter activity3.58E-02
99GO:0003727: single-stranded RNA binding3.58E-02
100GO:0004812: aminoacyl-tRNA ligase activity3.79E-02
101GO:0016874: ligase activity3.89E-02
102GO:0008536: Ran GTPase binding4.23E-02
103GO:0001085: RNA polymerase II transcription factor binding4.23E-02
104GO:0003700: transcription factor activity, sequence-specific DNA binding4.38E-02
105GO:0005355: glucose transmembrane transporter activity4.45E-02
106GO:0010181: FMN binding4.45E-02
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Gene type



Gene DE type