Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G59930

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905157: positive regulation of photosynthesis0.00E+00
2GO:2000469: negative regulation of peroxidase activity0.00E+00
3GO:2000121: regulation of removal of superoxide radicals0.00E+00
4GO:0033468: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
5GO:0006573: valine metabolic process0.00E+00
6GO:0090355: positive regulation of auxin metabolic process0.00E+00
7GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
8GO:0009103: lipopolysaccharide biosynthetic process0.00E+00
9GO:0090358: positive regulation of tryptophan metabolic process0.00E+00
10GO:0009904: chloroplast accumulation movement1.16E-05
11GO:0009903: chloroplast avoidance movement2.53E-05
12GO:1902334: fructose export from vacuole to cytoplasm8.61E-05
13GO:0010362: negative regulation of anion channel activity by blue light8.61E-05
14GO:0031426: polycistronic mRNA processing8.61E-05
15GO:0006551: leucine metabolic process8.61E-05
16GO:0010155: regulation of proton transport2.04E-04
17GO:0006898: receptor-mediated endocytosis2.04E-04
18GO:0010541: acropetal auxin transport2.04E-04
19GO:0010160: formation of animal organ boundary3.42E-04
20GO:0048443: stamen development4.16E-04
21GO:0010239: chloroplast mRNA processing4.92E-04
22GO:0043481: anthocyanin accumulation in tissues in response to UV light4.92E-04
23GO:0010587: miRNA catabolic process4.92E-04
24GO:0048442: sepal development6.55E-04
25GO:0008295: spermidine biosynthetic process6.55E-04
26GO:0006021: inositol biosynthetic process6.55E-04
27GO:0071483: cellular response to blue light6.55E-04
28GO:0034052: positive regulation of plant-type hypersensitive response8.29E-04
29GO:0010315: auxin efflux1.01E-03
30GO:0046855: inositol phosphate dephosphorylation1.01E-03
31GO:0060918: auxin transport1.01E-03
32GO:0009643: photosynthetic acclimation1.01E-03
33GO:0010076: maintenance of floral meristem identity1.20E-03
34GO:0009082: branched-chain amino acid biosynthetic process1.20E-03
35GO:0009099: valine biosynthetic process1.20E-03
36GO:0010019: chloroplast-nucleus signaling pathway1.20E-03
37GO:0048527: lateral root development1.35E-03
38GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.41E-03
39GO:0030307: positive regulation of cell growth1.41E-03
40GO:0009637: response to blue light1.48E-03
41GO:0043068: positive regulation of programmed cell death1.63E-03
42GO:0000105: histidine biosynthetic process1.63E-03
43GO:0009097: isoleucine biosynthetic process1.86E-03
44GO:0048507: meristem development2.10E-03
45GO:0009638: phototropism2.35E-03
46GO:0048354: mucilage biosynthetic process involved in seed coat development2.35E-03
47GO:0010192: mucilage biosynthetic process2.61E-03
48GO:0006995: cellular response to nitrogen starvation2.61E-03
49GO:0048441: petal development2.61E-03
50GO:0043069: negative regulation of programmed cell death2.61E-03
51GO:0009641: shade avoidance2.61E-03
52GO:0006857: oligopeptide transport2.71E-03
53GO:0000038: very long-chain fatty acid metabolic process2.87E-03
54GO:0072593: reactive oxygen species metabolic process2.87E-03
55GO:0043085: positive regulation of catalytic activity2.87E-03
56GO:0009750: response to fructose2.87E-03
57GO:0008361: regulation of cell size3.15E-03
58GO:0006790: sulfur compound metabolic process3.15E-03
59GO:0009767: photosynthetic electron transport chain3.43E-03
60GO:0009785: blue light signaling pathway3.43E-03
61GO:0030048: actin filament-based movement3.43E-03
62GO:0071555: cell wall organization3.43E-03
63GO:0010540: basipetal auxin transport3.73E-03
64GO:0048440: carpel development3.73E-03
65GO:0007015: actin filament organization3.73E-03
66GO:0010223: secondary shoot formation3.73E-03
67GO:0019853: L-ascorbic acid biosynthetic process4.03E-03
68GO:0046854: phosphatidylinositol phosphorylation4.03E-03
69GO:0000162: tryptophan biosynthetic process4.34E-03
70GO:0006863: purine nucleobase transport4.34E-03
71GO:0000027: ribosomal large subunit assembly4.65E-03
72GO:0007017: microtubule-based process4.98E-03
73GO:0019915: lipid storage5.32E-03
74GO:0048278: vesicle docking5.32E-03
75GO:0051260: protein homooligomerization5.32E-03
76GO:0019748: secondary metabolic process5.66E-03
77GO:0009814: defense response, incompatible interaction5.66E-03
78GO:0009294: DNA mediated transformation6.01E-03
79GO:0071369: cellular response to ethylene stimulus6.01E-03
80GO:0010150: leaf senescence6.18E-03
81GO:0019722: calcium-mediated signaling6.36E-03
82GO:0009958: positive gravitropism7.48E-03
83GO:0009646: response to absence of light7.87E-03
84GO:0061025: membrane fusion7.87E-03
85GO:0009791: post-embryonic development8.26E-03
86GO:0009749: response to glucose8.26E-03
87GO:0009851: auxin biosynthetic process8.26E-03
88GO:0009826: unidimensional cell growth9.21E-03
89GO:0010252: auxin homeostasis9.91E-03
90GO:0009639: response to red or far red light9.91E-03
91GO:0007267: cell-cell signaling1.03E-02
92GO:0006906: vesicle fusion1.21E-02
93GO:0015995: chlorophyll biosynthetic process1.26E-02
94GO:0030244: cellulose biosynthetic process1.35E-02
95GO:0018298: protein-chromophore linkage1.35E-02
96GO:0000160: phosphorelay signal transduction system1.40E-02
97GO:0009834: plant-type secondary cell wall biogenesis1.45E-02
98GO:0006811: ion transport1.45E-02
99GO:0010218: response to far red light1.45E-02
100GO:0010119: regulation of stomatal movement1.50E-02
101GO:0034599: cellular response to oxidative stress1.65E-02
102GO:0006629: lipid metabolic process1.76E-02
103GO:0006887: exocytosis1.81E-02
104GO:0009744: response to sucrose1.92E-02
105GO:0009640: photomorphogenesis1.92E-02
106GO:0009926: auxin polar transport1.92E-02
107GO:0008643: carbohydrate transport2.02E-02
108GO:0000165: MAPK cascade2.19E-02
109GO:0009409: response to cold2.23E-02
110GO:0009664: plant-type cell wall organization2.25E-02
111GO:0006813: potassium ion transport2.37E-02
112GO:0009734: auxin-activated signaling pathway2.48E-02
113GO:0009626: plant-type hypersensitive response2.79E-02
114GO:0009624: response to nematode3.04E-02
115GO:0009555: pollen development3.12E-02
116GO:0042744: hydrogen peroxide catabolic process3.92E-02
117GO:0006633: fatty acid biosynthetic process4.20E-02
118GO:0007623: circadian rhythm4.49E-02
119GO:0045490: pectin catabolic process4.49E-02
120GO:0010228: vegetative to reproductive phase transition of meristem4.64E-02
121GO:0009739: response to gibberellin4.86E-02
RankGO TermAdjusted P value
1GO:0008690: 3-deoxy-manno-octulosonate cytidylyltransferase activity0.00E+00
2GO:0046906: tetrapyrrole binding8.61E-05
3GO:0047259: glucomannan 4-beta-mannosyltransferase activity8.61E-05
4GO:0080132: fatty acid alpha-hydroxylase activity8.61E-05
5GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity8.61E-05
6GO:0003984: acetolactate synthase activity8.61E-05
7GO:0004328: formamidase activity8.61E-05
8GO:0003879: ATP phosphoribosyltransferase activity8.61E-05
9GO:0010347: L-galactose-1-phosphate phosphatase activity8.61E-05
10GO:0004766: spermidine synthase activity2.04E-04
11GO:0052832: inositol monophosphate 3-phosphatase activity2.04E-04
12GO:0008934: inositol monophosphate 1-phosphatase activity2.04E-04
13GO:0052833: inositol monophosphate 4-phosphatase activity2.04E-04
14GO:0005353: fructose transmembrane transporter activity2.04E-04
15GO:0080045: quercetin 3'-O-glucosyltransferase activity2.04E-04
16GO:0003913: DNA photolyase activity3.42E-04
17GO:0048027: mRNA 5'-UTR binding4.92E-04
18GO:0022890: inorganic cation transmembrane transporter activity4.92E-04
19GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides4.92E-04
20GO:0009882: blue light photoreceptor activity4.92E-04
21GO:0080046: quercetin 4'-O-glucosyltransferase activity1.01E-03
22GO:0000293: ferric-chelate reductase activity1.01E-03
23GO:0035673: oligopeptide transmembrane transporter activity1.01E-03
24GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.20E-03
25GO:0051753: mannan synthase activity1.20E-03
26GO:0004602: glutathione peroxidase activity1.20E-03
27GO:0019899: enzyme binding1.41E-03
28GO:0047372: acylglycerol lipase activity2.87E-03
29GO:0015386: potassium:proton antiporter activity2.87E-03
30GO:0008515: sucrose transmembrane transporter activity2.87E-03
31GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.09E-03
32GO:0000976: transcription regulatory region sequence-specific DNA binding3.15E-03
33GO:0015198: oligopeptide transporter activity3.15E-03
34GO:0022857: transmembrane transporter activity3.38E-03
35GO:0000155: phosphorelay sensor kinase activity3.43E-03
36GO:0010329: auxin efflux transmembrane transporter activity3.43E-03
37GO:0008081: phosphoric diester hydrolase activity3.43E-03
38GO:0003774: motor activity3.73E-03
39GO:0008146: sulfotransferase activity4.03E-03
40GO:0051119: sugar transmembrane transporter activity4.03E-03
41GO:0005345: purine nucleobase transmembrane transporter activity4.98E-03
42GO:0015079: potassium ion transmembrane transporter activity4.98E-03
43GO:0016491: oxidoreductase activity5.21E-03
44GO:0008408: 3'-5' exonuclease activity5.32E-03
45GO:0016779: nucleotidyltransferase activity5.66E-03
46GO:0030570: pectate lyase activity6.01E-03
47GO:0004527: exonuclease activity7.48E-03
48GO:0015299: solute:proton antiporter activity7.87E-03
49GO:0010181: FMN binding7.87E-03
50GO:0005355: glucose transmembrane transporter activity7.87E-03
51GO:0016597: amino acid binding1.08E-02
52GO:0000149: SNARE binding1.70E-02
53GO:0004185: serine-type carboxypeptidase activity1.92E-02
54GO:0005484: SNAP receptor activity1.92E-02
55GO:0003777: microtubule motor activity2.55E-02
56GO:0080043: quercetin 3-O-glucosyltransferase activity2.85E-02
57GO:0080044: quercetin 7-O-glucosyltransferase activity2.85E-02
58GO:0019843: rRNA binding3.57E-02
59GO:0016829: lyase activity3.78E-02
60GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding3.92E-02
61GO:0008017: microtubule binding4.64E-02
62GO:0008194: UDP-glycosyltransferase activity4.86E-02
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Gene type



Gene DE type