Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G56660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
2GO:0010273: detoxification of copper ion0.00E+00
3GO:0002764: immune response-regulating signaling pathway0.00E+00
4GO:0010324: membrane invagination0.00E+00
5GO:0010200: response to chitin7.67E-09
6GO:0010150: leaf senescence5.43E-05
7GO:0009751: response to salicylic acid6.73E-05
8GO:1900056: negative regulation of leaf senescence1.05E-04
9GO:0009737: response to abscisic acid1.12E-04
10GO:0009620: response to fungus1.59E-04
11GO:0051938: L-glutamate import1.75E-04
12GO:0015969: guanosine tetraphosphate metabolic process1.75E-04
13GO:0009609: response to symbiotic bacterium1.75E-04
14GO:0006643: membrane lipid metabolic process1.75E-04
15GO:1901430: positive regulation of syringal lignin biosynthetic process1.75E-04
16GO:0090421: embryonic meristem initiation1.75E-04
17GO:0048508: embryonic meristem development1.75E-04
18GO:0006979: response to oxidative stress2.83E-04
19GO:0008361: regulation of cell size3.86E-04
20GO:0015802: basic amino acid transport3.96E-04
21GO:0019374: galactolipid metabolic process3.96E-04
22GO:0031349: positive regulation of defense response3.96E-04
23GO:0009945: radial axis specification3.96E-04
24GO:0000719: photoreactive repair3.96E-04
25GO:0043091: L-arginine import3.96E-04
26GO:0006597: spermine biosynthetic process3.96E-04
27GO:0015914: phospholipid transport3.96E-04
28GO:0009838: abscission3.96E-04
29GO:0009753: response to jasmonic acid5.04E-04
30GO:0009617: response to bacterium5.94E-04
31GO:0080163: regulation of protein serine/threonine phosphatase activity6.47E-04
32GO:0009653: anatomical structure morphogenesis6.47E-04
33GO:0006048: UDP-N-acetylglucosamine biosynthetic process6.47E-04
34GO:0016045: detection of bacterium6.47E-04
35GO:1900140: regulation of seedling development6.47E-04
36GO:0010359: regulation of anion channel activity6.47E-04
37GO:0071456: cellular response to hypoxia8.98E-04
38GO:0034219: carbohydrate transmembrane transport9.23E-04
39GO:0043207: response to external biotic stimulus9.23E-04
40GO:0015749: monosaccharide transport9.23E-04
41GO:0030100: regulation of endocytosis9.23E-04
42GO:0072583: clathrin-dependent endocytosis9.23E-04
43GO:0009414: response to water deprivation1.06E-03
44GO:0060548: negative regulation of cell death1.22E-03
45GO:0046345: abscisic acid catabolic process1.22E-03
46GO:0010483: pollen tube reception1.22E-03
47GO:0006621: protein retention in ER lumen1.22E-03
48GO:0010188: response to microbial phytotoxin1.22E-03
49GO:0009611: response to wounding1.26E-03
50GO:0046323: glucose import1.32E-03
51GO:0006596: polyamine biosynthetic process1.91E-03
52GO:0009759: indole glucosinolate biosynthetic process1.91E-03
53GO:0045926: negative regulation of growth2.30E-03
54GO:0009942: longitudinal axis specification2.30E-03
55GO:0001666: response to hypoxia2.34E-03
56GO:0009816: defense response to bacterium, incompatible interaction2.47E-03
57GO:0046470: phosphatidylcholine metabolic process2.70E-03
58GO:0043090: amino acid import2.70E-03
59GO:0050829: defense response to Gram-negative bacterium2.70E-03
60GO:0010044: response to aluminum ion2.70E-03
61GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.70E-03
62GO:0009610: response to symbiotic fungus2.70E-03
63GO:0006644: phospholipid metabolic process3.13E-03
64GO:0009787: regulation of abscisic acid-activated signaling pathway3.13E-03
65GO:1900150: regulation of defense response to fungus3.13E-03
66GO:0006470: protein dephosphorylation3.29E-03
67GO:0007568: aging3.51E-03
68GO:0010099: regulation of photomorphogenesis3.58E-03
69GO:0009880: embryonic pattern specification3.58E-03
70GO:0010120: camalexin biosynthetic process3.58E-03
71GO:0010204: defense response signaling pathway, resistance gene-independent3.58E-03
72GO:0009821: alkaloid biosynthetic process4.05E-03
73GO:0001708: cell fate specification4.05E-03
74GO:0009651: response to salt stress4.07E-03
75GO:0042742: defense response to bacterium4.19E-03
76GO:0030042: actin filament depolymerization4.54E-03
77GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.54E-03
78GO:0008202: steroid metabolic process4.54E-03
79GO:0006897: endocytosis4.56E-03
80GO:0051707: response to other organism4.95E-03
81GO:0006032: chitin catabolic process5.05E-03
82GO:0009809: lignin biosynthetic process6.66E-03
83GO:0055046: microgametogenesis6.70E-03
84GO:0046688: response to copper ion7.89E-03
85GO:0009626: plant-type hypersensitive response8.40E-03
86GO:0009863: salicylic acid mediated signaling pathway9.15E-03
87GO:0051302: regulation of cell division9.80E-03
88GO:0006825: copper ion transport9.80E-03
89GO:0003333: amino acid transmembrane transport1.05E-02
90GO:0016998: cell wall macromolecule catabolic process1.05E-02
91GO:0015992: proton transport1.05E-02
92GO:0035428: hexose transmembrane transport1.12E-02
93GO:0009411: response to UV1.19E-02
94GO:0006012: galactose metabolic process1.19E-02
95GO:0009058: biosynthetic process1.26E-02
96GO:0010089: xylem development1.26E-02
97GO:0007275: multicellular organism development1.36E-02
98GO:0010118: stomatal movement1.41E-02
99GO:0006662: glycerol ether metabolic process1.49E-02
100GO:0040008: regulation of growth1.57E-02
101GO:0008654: phospholipid biosynthetic process1.64E-02
102GO:0071554: cell wall organization or biogenesis1.72E-02
103GO:0016032: viral process1.81E-02
104GO:0007166: cell surface receptor signaling pathway1.88E-02
105GO:0019760: glucosinolate metabolic process1.98E-02
106GO:0051607: defense response to virus2.15E-02
107GO:0009615: response to virus2.24E-02
108GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.33E-02
109GO:0006468: protein phosphorylation2.39E-02
110GO:0008219: cell death2.71E-02
111GO:0050832: defense response to fungus2.74E-02
112GO:0009407: toxin catabolic process2.90E-02
113GO:0009723: response to ethylene2.95E-02
114GO:0010043: response to zinc ion3.00E-02
115GO:0006865: amino acid transport3.10E-02
116GO:0006952: defense response3.10E-02
117GO:0034599: cellular response to oxidative stress3.31E-02
118GO:0045892: negative regulation of transcription, DNA-templated3.84E-02
119GO:0010114: response to red light3.84E-02
120GO:0009744: response to sucrose3.84E-02
121GO:0042546: cell wall biogenesis3.95E-02
122GO:0009636: response to toxic substance4.17E-02
123GO:0009965: leaf morphogenesis4.17E-02
124GO:0031347: regulation of defense response4.39E-02
125GO:0007165: signal transduction4.47E-02
126GO:0009664: plant-type cell wall organization4.51E-02
127GO:0016042: lipid catabolic process4.52E-02
128GO:0006486: protein glycosylation4.74E-02
129GO:0009736: cytokinin-activated signaling pathway4.74E-02
130GO:0010224: response to UV-B4.86E-02
RankGO TermAdjusted P value
1GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
2GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
3GO:0004168: dolichol kinase activity0.00E+00
4GO:0004714: transmembrane receptor protein tyrosine kinase activity1.35E-04
5GO:0009679: hexose:proton symporter activity1.75E-04
6GO:0032050: clathrin heavy chain binding1.75E-04
7GO:2001227: quercitrin binding1.75E-04
8GO:0016768: spermine synthase activity1.75E-04
9GO:2001147: camalexin binding1.75E-04
10GO:0004766: spermidine synthase activity3.96E-04
11GO:0015036: disulfide oxidoreductase activity3.96E-04
12GO:0008728: GTP diphosphokinase activity3.96E-04
13GO:0015189: L-lysine transmembrane transporter activity9.23E-04
14GO:0015181: arginine transmembrane transporter activity9.23E-04
15GO:0016656: monodehydroascorbate reductase (NADH) activity9.23E-04
16GO:0004737: pyruvate decarboxylase activity1.22E-03
17GO:0046923: ER retention sequence binding1.22E-03
18GO:0005313: L-glutamate transmembrane transporter activity1.22E-03
19GO:0019199: transmembrane receptor protein kinase activity1.22E-03
20GO:0010294: abscisic acid glucosyltransferase activity1.56E-03
21GO:0015145: monosaccharide transmembrane transporter activity1.56E-03
22GO:0005546: phosphatidylinositol-4,5-bisphosphate binding1.56E-03
23GO:0005496: steroid binding1.56E-03
24GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.56E-03
25GO:0004605: phosphatidate cytidylyltransferase activity1.91E-03
26GO:0030976: thiamine pyrophosphate binding1.91E-03
27GO:0003978: UDP-glucose 4-epimerase activity2.30E-03
28GO:0016831: carboxy-lyase activity2.70E-03
29GO:0043295: glutathione binding2.70E-03
30GO:0004620: phospholipase activity2.70E-03
31GO:0008142: oxysterol binding3.58E-03
32GO:0004630: phospholipase D activity3.58E-03
33GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity3.58E-03
34GO:0015174: basic amino acid transmembrane transporter activity4.54E-03
35GO:0047617: acyl-CoA hydrolase activity4.54E-03
36GO:0016844: strictosidine synthase activity4.54E-03
37GO:0008171: O-methyltransferase activity5.05E-03
38GO:0004864: protein phosphatase inhibitor activity5.05E-03
39GO:0004568: chitinase activity5.05E-03
40GO:0005388: calcium-transporting ATPase activity6.70E-03
41GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism6.70E-03
42GO:0004022: alcohol dehydrogenase (NAD) activity6.70E-03
43GO:0015171: amino acid transmembrane transporter activity7.38E-03
44GO:0051119: sugar transmembrane transporter activity7.89E-03
45GO:0004672: protein kinase activity8.20E-03
46GO:0004871: signal transducer activity8.46E-03
47GO:0080044: quercetin 7-O-glucosyltransferase activity8.66E-03
48GO:0080043: quercetin 3-O-glucosyltransferase activity8.66E-03
49GO:0004722: protein serine/threonine phosphatase activity8.97E-03
50GO:0043424: protein histidine kinase binding9.80E-03
51GO:0033612: receptor serine/threonine kinase binding1.05E-02
52GO:0047134: protein-disulfide reductase activity1.33E-02
53GO:0015144: carbohydrate transmembrane transporter activity1.43E-02
54GO:0005199: structural constituent of cell wall1.49E-02
55GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.53E-02
56GO:0004791: thioredoxin-disulfide reductase activity1.56E-02
57GO:0005355: glucose transmembrane transporter activity1.56E-02
58GO:0050662: coenzyme binding1.56E-02
59GO:0005351: sugar:proton symporter activity1.61E-02
60GO:0004872: receptor activity1.64E-02
61GO:0008194: UDP-glycosyltransferase activity1.84E-02
62GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.89E-02
63GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.06E-02
64GO:0016413: O-acetyltransferase activity2.15E-02
65GO:0008375: acetylglucosaminyltransferase activity2.42E-02
66GO:0046982: protein heterodimerization activity2.50E-02
67GO:0016301: kinase activity2.51E-02
68GO:0050897: cobalt ion binding3.00E-02
69GO:0000987: core promoter proximal region sequence-specific DNA binding3.31E-02
70GO:0003993: acid phosphatase activity3.31E-02
71GO:0004712: protein serine/threonine/tyrosine kinase activity3.41E-02
72GO:0004364: glutathione transferase activity3.73E-02
73GO:0005525: GTP binding4.00E-02
74GO:0035091: phosphatidylinositol binding4.06E-02
75GO:0005198: structural molecule activity4.17E-02
76GO:0015293: symporter activity4.17E-02
77GO:0005509: calcium ion binding4.67E-02
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Gene type



Gene DE type