co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G56340

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042964: thioredoxin reduction	7.23E-05
2	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	7.23E-05
3	GO:0008535: respiratory chain complex IV assembly	1.74E-04
4	GO:0051252: regulation of RNA metabolic process	1.74E-04
5	GO:0080183: response to photooxidative stress	1.74E-04
6	GO:0055074: calcium ion homeostasis	2.93E-04
7	GO:0061158: 3'-UTR-mediated mRNA destabilization	2.93E-04
8	GO:0045836: positive regulation of meiotic nuclear division	2.93E-04
9	GO:0052324: plant-type cell wall cellulose biosynthetic process	2.93E-04
10	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	2.93E-04
11	GO:0000187: activation of MAPK activity	4.23E-04
12	GO:0072334: UDP-galactose transmembrane transport	4.23E-04
13	GO:1990937: xylan acetylation	5.65E-04
14	GO:0033320: UDP-D-xylose biosynthetic process	5.65E-04
15	GO:0006536: glutamate metabolic process	5.65E-04
16	GO:0046283: anthocyanin-containing compound metabolic process	7.14E-04
17	GO:0097428: protein maturation by iron-sulfur cluster transfer	7.14E-04
18	GO:0045927: positive regulation of growth	7.14E-04
19	GO:0060918: auxin transport	8.73E-04
20	GO:0042732: D-xylose metabolic process	8.73E-04
21	GO:0042176: regulation of protein catabolic process	8.73E-04
22	GO:0000911: cytokinesis by cell plate formation	1.04E-03
23	GO:0015937: coenzyme A biosynthetic process	1.21E-03
24	GO:0009819: drought recovery	1.40E-03
25	GO:0019430: removal of superoxide radicals	1.59E-03
26	GO:0010204: defense response signaling pathway, resistance gene-independent	1.59E-03
27	GO:0015780: nucleotide-sugar transport	1.80E-03
28	GO:0048268: clathrin coat assembly	2.01E-03
29	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.23E-03
30	GO:0042742: defense response to bacterium	2.41E-03
31	GO:0009626: plant-type hypersensitive response	2.54E-03
32	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	2.94E-03
33	GO:0006541: glutamine metabolic process	3.19E-03
34	GO:0070588: calcium ion transmembrane transport	3.44E-03
35	GO:0009225: nucleotide-sugar metabolic process	3.44E-03
36	GO:0009825: multidimensional cell growth	3.44E-03
37	GO:0006874: cellular calcium ion homeostasis	4.26E-03
38	GO:0051321: meiotic cell cycle	4.54E-03
39	GO:0040008: regulation of growth	4.69E-03
40	GO:0046686: response to cadmium ion	4.72E-03
41	GO:0009814: defense response, incompatible interaction	4.83E-03
42	GO:0010227: floral organ abscission	5.13E-03
43	GO:0006468: protein phosphorylation	5.57E-03
44	GO:0010051: xylem and phloem pattern formation	6.05E-03
45	GO:0048544: recognition of pollen	6.70E-03
46	GO:0006511: ubiquitin-dependent protein catabolic process	6.83E-03
47	GO:0030163: protein catabolic process	8.07E-03
48	GO:0016579: protein deubiquitination	9.16E-03
49	GO:0051607: defense response to virus	9.16E-03
50	GO:0016049: cell growth	1.11E-02
51	GO:0045454: cell redox homeostasis	1.13E-02
52	GO:0006499: N-terminal protein myristoylation	1.23E-02
53	GO:0009407: toxin catabolic process	1.23E-02
54	GO:0009834: plant-type secondary cell wall biogenesis	1.23E-02
55	GO:0009631: cold acclimation	1.27E-02
56	GO:0010043: response to zinc ion	1.27E-02
57	GO:0006099: tricarboxylic acid cycle	1.40E-02
58	GO:0009651: response to salt stress	1.51E-02
59	GO:0006897: endocytosis	1.54E-02
60	GO:0042542: response to hydrogen peroxide	1.58E-02
61	GO:0009409: response to cold	1.67E-02
62	GO:0000209: protein polyubiquitination	1.67E-02
63	GO:0008643: carbohydrate transport	1.72E-02
64	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.86E-02
65	GO:0000165: MAPK cascade	1.86E-02
66	GO:0031347: regulation of defense response	1.86E-02
67	GO:0009846: pollen germination	1.91E-02
68	GO:0042538: hyperosmotic salinity response	1.91E-02
69	GO:0048316: seed development	2.31E-02
70	GO:0016569: covalent chromatin modification	2.47E-02
71	GO:0006396: RNA processing	2.64E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0048037: cofactor binding	7.23E-05
3	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	7.23E-05
4	GO:0031219: levanase activity	7.23E-05
5	GO:2001147: camalexin binding	7.23E-05
6	GO:2001227: quercitrin binding	7.23E-05
7	GO:0051669: fructan beta-fructosidase activity	7.23E-05
8	GO:0004867: serine-type endopeptidase inhibitor activity	1.64E-04
9	GO:0008428: ribonuclease inhibitor activity	1.74E-04
10	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	1.74E-04
11	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.74E-04
12	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.74E-04
13	GO:0004351: glutamate decarboxylase activity	4.23E-04
14	GO:0016004: phospholipase activator activity	5.65E-04
15	GO:0005459: UDP-galactose transmembrane transporter activity	7.14E-04
16	GO:0008948: oxaloacetate decarboxylase activity	7.14E-04
17	GO:0048040: UDP-glucuronate decarboxylase activity	8.73E-04
18	GO:1990538: xylan O-acetyltransferase activity	8.73E-04
19	GO:0005096: GTPase activator activity	9.91E-04
20	GO:0070403: NAD+ binding	1.04E-03
21	GO:0016301: kinase activity	1.10E-03
22	GO:0043295: glutathione binding	1.21E-03
23	GO:0005338: nucleotide-sugar transmembrane transporter activity	1.21E-03
24	GO:0004525: ribonuclease III activity	1.40E-03
25	GO:0004708: MAP kinase kinase activity	1.40E-03
26	GO:0030234: enzyme regulator activity	2.23E-03
27	GO:0005545: 1-phosphatidylinositol binding	2.23E-03
28	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.94E-03
29	GO:0005388: calcium-transporting ATPase activity	2.94E-03
30	GO:0004565: beta-galactosidase activity	2.94E-03
31	GO:0031624: ubiquitin conjugating enzyme binding	3.19E-03
32	GO:0005217: intracellular ligand-gated ion channel activity	3.44E-03
33	GO:0004970: ionotropic glutamate receptor activity	3.44E-03
34	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	4.54E-03
35	GO:0003727: single-stranded RNA binding	5.43E-03
36	GO:0030276: clathrin binding	6.38E-03
37	GO:0001085: RNA polymerase II transcription factor binding	6.38E-03
38	GO:0010181: FMN binding	6.70E-03
39	GO:0004791: thioredoxin-disulfide reductase activity	6.70E-03
40	GO:0004872: receptor activity	7.04E-03
41	GO:0004843: thiol-dependent ubiquitin-specific protease activity	7.38E-03
42	GO:0005516: calmodulin binding	7.78E-03
43	GO:0004674: protein serine/threonine kinase activity	8.02E-03
44	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	8.79E-03
45	GO:0030247: polysaccharide binding	1.07E-02
46	GO:0004683: calmodulin-dependent protein kinase activity	1.07E-02
47	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.27E-02
48	GO:0003824: catalytic activity	1.28E-02
49	GO:0005524: ATP binding	1.29E-02
50	GO:0042393: histone binding	1.49E-02
51	GO:0009055: electron carrier activity	1.50E-02
52	GO:0004364: glutathione transferase activity	1.58E-02
53	GO:0051537: 2 iron, 2 sulfur cluster binding	1.72E-02
54	GO:0005198: structural molecule activity	1.77E-02
55	GO:0031625: ubiquitin protein ligase binding	2.16E-02
56	GO:0022857: transmembrane transporter activity	2.47E-02
57	GO:0051082: unfolded protein binding	2.58E-02
58	GO:0015035: protein disulfide oxidoreductase activity	2.64E-02
59	GO:0016740: transferase activity	3.02E-02
60	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.09E-02
61	GO:0030170: pyridoxal phosphate binding	3.26E-02
62	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.32E-02
63	GO:0030246: carbohydrate binding	3.33E-02
64	GO:0015297: antiporter activity	3.69E-02
65	GO:0042802: identical protein binding	4.52E-02
66	GO:0046872: metal ion binding	4.53E-02
67	GO:0005509: calcium ion binding	4.61E-02