GO Enrichment Analysis of Co-expressed Genes with
AT1G55490
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 2 | GO:0046040: IMP metabolic process | 0.00E+00 |
| 3 | GO:0051290: protein heterotetramerization | 0.00E+00 |
| 4 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 6 | GO:1901671: positive regulation of superoxide dismutase activity | 0.00E+00 |
| 7 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 8 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 9 | GO:0006167: AMP biosynthetic process | 0.00E+00 |
| 10 | GO:0009658: chloroplast organization | 3.95E-06 |
| 11 | GO:0009657: plastid organization | 6.18E-06 |
| 12 | GO:0042793: transcription from plastid promoter | 9.03E-05 |
| 13 | GO:0042026: protein refolding | 1.24E-04 |
| 14 | GO:0006458: 'de novo' protein folding | 1.24E-04 |
| 15 | GO:0009793: embryo development ending in seed dormancy | 1.36E-04 |
| 16 | GO:0000105: histidine biosynthetic process | 2.09E-04 |
| 17 | GO:0019252: starch biosynthetic process | 2.20E-04 |
| 18 | GO:0042371: vitamin K biosynthetic process | 2.34E-04 |
| 19 | GO:0006419: alanyl-tRNA aminoacylation | 2.34E-04 |
| 20 | GO:2000025: regulation of leaf formation | 2.34E-04 |
| 21 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 2.34E-04 |
| 22 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 2.34E-04 |
| 23 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 2.34E-04 |
| 24 | GO:0005980: glycogen catabolic process | 2.34E-04 |
| 25 | GO:0000476: maturation of 4.5S rRNA | 2.34E-04 |
| 26 | GO:0000967: rRNA 5'-end processing | 2.34E-04 |
| 27 | GO:0070509: calcium ion import | 2.34E-04 |
| 28 | GO:0010027: thylakoid membrane organization | 3.96E-04 |
| 29 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 5.20E-04 |
| 30 | GO:0001682: tRNA 5'-leader removal | 5.20E-04 |
| 31 | GO:0034470: ncRNA processing | 5.20E-04 |
| 32 | GO:0010198: synergid death | 5.20E-04 |
| 33 | GO:0060359: response to ammonium ion | 5.20E-04 |
| 34 | GO:0048255: mRNA stabilization | 5.20E-04 |
| 35 | GO:0019388: galactose catabolic process | 5.20E-04 |
| 36 | GO:0044208: 'de novo' AMP biosynthetic process | 5.20E-04 |
| 37 | GO:1900871: chloroplast mRNA modification | 5.20E-04 |
| 38 | GO:0009790: embryo development | 6.58E-04 |
| 39 | GO:0010020: chloroplast fission | 7.36E-04 |
| 40 | GO:0042780: tRNA 3'-end processing | 8.44E-04 |
| 41 | GO:0043157: response to cation stress | 8.44E-04 |
| 42 | GO:0005977: glycogen metabolic process | 8.44E-04 |
| 43 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 8.44E-04 |
| 44 | GO:0048281: inflorescence morphogenesis | 8.44E-04 |
| 45 | GO:0009451: RNA modification | 8.76E-04 |
| 46 | GO:0006986: response to unfolded protein | 1.20E-03 |
| 47 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.20E-03 |
| 48 | GO:0009152: purine ribonucleotide biosynthetic process | 1.20E-03 |
| 49 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.20E-03 |
| 50 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.20E-03 |
| 51 | GO:0006164: purine nucleotide biosynthetic process | 1.20E-03 |
| 52 | GO:0010148: transpiration | 1.20E-03 |
| 53 | GO:0016556: mRNA modification | 1.20E-03 |
| 54 | GO:0009590: detection of gravity | 1.20E-03 |
| 55 | GO:0061077: chaperone-mediated protein folding | 1.21E-03 |
| 56 | GO:0006730: one-carbon metabolic process | 1.33E-03 |
| 57 | GO:0009664: plant-type cell wall organization | 1.37E-03 |
| 58 | GO:0010021: amylopectin biosynthetic process | 1.61E-03 |
| 59 | GO:0051781: positive regulation of cell division | 1.61E-03 |
| 60 | GO:0044205: 'de novo' UMP biosynthetic process | 1.61E-03 |
| 61 | GO:0048868: pollen tube development | 1.97E-03 |
| 62 | GO:0010236: plastoquinone biosynthetic process | 2.05E-03 |
| 63 | GO:0032543: mitochondrial translation | 2.05E-03 |
| 64 | GO:0050665: hydrogen peroxide biosynthetic process | 2.52E-03 |
| 65 | GO:0009959: negative gravitropism | 2.52E-03 |
| 66 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.52E-03 |
| 67 | GO:0009630: gravitropism | 2.60E-03 |
| 68 | GO:0010583: response to cyclopentenone | 2.60E-03 |
| 69 | GO:0009828: plant-type cell wall loosening | 2.94E-03 |
| 70 | GO:0010252: auxin homeostasis | 2.94E-03 |
| 71 | GO:0009854: oxidative photosynthetic carbon pathway | 3.03E-03 |
| 72 | GO:0042372: phylloquinone biosynthetic process | 3.03E-03 |
| 73 | GO:0009942: longitudinal axis specification | 3.03E-03 |
| 74 | GO:0015693: magnesium ion transport | 3.58E-03 |
| 75 | GO:0010103: stomatal complex morphogenesis | 3.58E-03 |
| 76 | GO:0048528: post-embryonic root development | 3.58E-03 |
| 77 | GO:0009772: photosynthetic electron transport in photosystem II | 3.58E-03 |
| 78 | GO:0070370: cellular heat acclimation | 3.58E-03 |
| 79 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 3.58E-03 |
| 80 | GO:0010444: guard mother cell differentiation | 3.58E-03 |
| 81 | GO:0006400: tRNA modification | 3.58E-03 |
| 82 | GO:0015995: chlorophyll biosynthetic process | 4.13E-03 |
| 83 | GO:0031540: regulation of anthocyanin biosynthetic process | 4.15E-03 |
| 84 | GO:0048564: photosystem I assembly | 4.15E-03 |
| 85 | GO:0005978: glycogen biosynthetic process | 4.15E-03 |
| 86 | GO:0006353: DNA-templated transcription, termination | 4.15E-03 |
| 87 | GO:0009409: response to cold | 4.60E-03 |
| 88 | GO:0032544: plastid translation | 4.74E-03 |
| 89 | GO:0007389: pattern specification process | 4.74E-03 |
| 90 | GO:0001558: regulation of cell growth | 4.74E-03 |
| 91 | GO:0010204: defense response signaling pathway, resistance gene-independent | 4.74E-03 |
| 92 | GO:0000373: Group II intron splicing | 5.37E-03 |
| 93 | GO:0006098: pentose-phosphate shunt | 5.37E-03 |
| 94 | GO:0006783: heme biosynthetic process | 5.37E-03 |
| 95 | GO:0045087: innate immune response | 5.79E-03 |
| 96 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.03E-03 |
| 97 | GO:0009098: leucine biosynthetic process | 6.03E-03 |
| 98 | GO:1900865: chloroplast RNA modification | 6.03E-03 |
| 99 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 6.03E-03 |
| 100 | GO:0045036: protein targeting to chloroplast | 6.71E-03 |
| 101 | GO:0006949: syncytium formation | 6.71E-03 |
| 102 | GO:0006259: DNA metabolic process | 6.71E-03 |
| 103 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.71E-03 |
| 104 | GO:0006535: cysteine biosynthetic process from serine | 6.71E-03 |
| 105 | GO:0010015: root morphogenesis | 7.43E-03 |
| 106 | GO:0006265: DNA topological change | 7.43E-03 |
| 107 | GO:0009089: lysine biosynthetic process via diaminopimelate | 7.43E-03 |
| 108 | GO:0009073: aromatic amino acid family biosynthetic process | 7.43E-03 |
| 109 | GO:0006415: translational termination | 7.43E-03 |
| 110 | GO:0005983: starch catabolic process | 8.17E-03 |
| 111 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.17E-03 |
| 112 | GO:0045037: protein import into chloroplast stroma | 8.17E-03 |
| 113 | GO:0006006: glucose metabolic process | 8.93E-03 |
| 114 | GO:0010229: inflorescence development | 8.93E-03 |
| 115 | GO:0050826: response to freezing | 8.93E-03 |
| 116 | GO:0006094: gluconeogenesis | 8.93E-03 |
| 117 | GO:2000012: regulation of auxin polar transport | 8.93E-03 |
| 118 | GO:0048467: gynoecium development | 9.72E-03 |
| 119 | GO:0010207: photosystem II assembly | 9.72E-03 |
| 120 | GO:0090351: seedling development | 1.05E-02 |
| 121 | GO:0070588: calcium ion transmembrane transport | 1.05E-02 |
| 122 | GO:0071732: cellular response to nitric oxide | 1.05E-02 |
| 123 | GO:0042023: DNA endoreduplication | 1.14E-02 |
| 124 | GO:0000162: tryptophan biosynthetic process | 1.14E-02 |
| 125 | GO:0019344: cysteine biosynthetic process | 1.22E-02 |
| 126 | GO:0009116: nucleoside metabolic process | 1.22E-02 |
| 127 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.22E-02 |
| 128 | GO:0015979: photosynthesis | 1.27E-02 |
| 129 | GO:0051302: regulation of cell division | 1.31E-02 |
| 130 | GO:0019953: sexual reproduction | 1.31E-02 |
| 131 | GO:0006418: tRNA aminoacylation for protein translation | 1.31E-02 |
| 132 | GO:0015992: proton transport | 1.40E-02 |
| 133 | GO:0048511: rhythmic process | 1.40E-02 |
| 134 | GO:0007005: mitochondrion organization | 1.50E-02 |
| 135 | GO:0031348: negative regulation of defense response | 1.50E-02 |
| 136 | GO:0071369: cellular response to ethylene stimulus | 1.59E-02 |
| 137 | GO:0001944: vasculature development | 1.59E-02 |
| 138 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.59E-02 |
| 139 | GO:0005975: carbohydrate metabolic process | 1.78E-02 |
| 140 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.79E-02 |
| 141 | GO:0008033: tRNA processing | 1.89E-02 |
| 142 | GO:0006606: protein import into nucleus | 1.89E-02 |
| 143 | GO:0048653: anther development | 1.89E-02 |
| 144 | GO:0006662: glycerol ether metabolic process | 1.99E-02 |
| 145 | GO:0042752: regulation of circadian rhythm | 2.10E-02 |
| 146 | GO:0007059: chromosome segregation | 2.10E-02 |
| 147 | GO:0008654: phospholipid biosynthetic process | 2.20E-02 |
| 148 | GO:0006508: proteolysis | 2.24E-02 |
| 149 | GO:0006633: fatty acid biosynthetic process | 2.27E-02 |
| 150 | GO:0071281: cellular response to iron ion | 2.54E-02 |
| 151 | GO:0000910: cytokinesis | 2.89E-02 |
| 152 | GO:0001666: response to hypoxia | 3.01E-02 |
| 153 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 3.13E-02 |
| 154 | GO:0009416: response to light stimulus | 3.60E-02 |
| 155 | GO:0009826: unidimensional cell growth | 3.71E-02 |
| 156 | GO:0006865: amino acid transport | 4.16E-02 |
| 157 | GO:0009853: photorespiration | 4.30E-02 |
| 158 | GO:0034599: cellular response to oxidative stress | 4.43E-02 |
| 159 | GO:0048366: leaf development | 4.52E-02 |
| 160 | GO:0006631: fatty acid metabolic process | 4.85E-02 |
| 161 | GO:0010200: response to chitin | 4.91E-02 |
| 162 | GO:0006457: protein folding | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 2 | GO:0004636: phosphoribosyl-ATP diphosphatase activity | 0.00E+00 |
| 3 | GO:0015267: channel activity | 0.00E+00 |
| 4 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 5 | GO:0004019: adenylosuccinate synthase activity | 0.00E+00 |
| 6 | GO:0003937: IMP cyclohydrolase activity | 0.00E+00 |
| 7 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 8 | GO:0004635: phosphoribosyl-AMP cyclohydrolase activity | 0.00E+00 |
| 9 | GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity | 0.00E+00 |
| 10 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 11 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 12 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 13 | GO:0051060: pullulanase activity | 0.00E+00 |
| 14 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 15 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 16 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 17 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 2.56E-06 |
| 18 | GO:0004176: ATP-dependent peptidase activity | 2.83E-06 |
| 19 | GO:0008237: metallopeptidase activity | 2.28E-05 |
| 20 | GO:0004556: alpha-amylase activity | 9.03E-05 |
| 21 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 2.34E-04 |
| 22 | GO:0005227: calcium activated cation channel activity | 2.34E-04 |
| 23 | GO:0008184: glycogen phosphorylase activity | 2.34E-04 |
| 24 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 2.34E-04 |
| 25 | GO:0004813: alanine-tRNA ligase activity | 2.34E-04 |
| 26 | GO:0004645: phosphorylase activity | 2.34E-04 |
| 27 | GO:0003723: RNA binding | 2.61E-04 |
| 28 | GO:0005525: GTP binding | 4.52E-04 |
| 29 | GO:0044183: protein binding involved in protein folding | 5.04E-04 |
| 30 | GO:0003852: 2-isopropylmalate synthase activity | 5.20E-04 |
| 31 | GO:0004614: phosphoglucomutase activity | 5.20E-04 |
| 32 | GO:0019156: isoamylase activity | 5.20E-04 |
| 33 | GO:0004222: metalloendopeptidase activity | 6.31E-04 |
| 34 | GO:0070330: aromatase activity | 8.44E-04 |
| 35 | GO:0002161: aminoacyl-tRNA editing activity | 8.44E-04 |
| 36 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 8.44E-04 |
| 37 | GO:0004519: endonuclease activity | 1.07E-03 |
| 38 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.20E-03 |
| 39 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.20E-03 |
| 40 | GO:0019201: nucleotide kinase activity | 1.20E-03 |
| 41 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 1.20E-03 |
| 42 | GO:0016851: magnesium chelatase activity | 1.20E-03 |
| 43 | GO:0016149: translation release factor activity, codon specific | 1.20E-03 |
| 44 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.20E-03 |
| 45 | GO:0008891: glycolate oxidase activity | 1.61E-03 |
| 46 | GO:0004659: prenyltransferase activity | 1.61E-03 |
| 47 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.61E-03 |
| 48 | GO:0019199: transmembrane receptor protein kinase activity | 1.61E-03 |
| 49 | GO:0042277: peptide binding | 1.61E-03 |
| 50 | GO:0016887: ATPase activity | 1.98E-03 |
| 51 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 2.05E-03 |
| 52 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.05E-03 |
| 53 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 2.05E-03 |
| 54 | GO:0005275: amine transmembrane transporter activity | 2.05E-03 |
| 55 | GO:0018685: alkane 1-monooxygenase activity | 2.05E-03 |
| 56 | GO:0051082: unfolded protein binding | 2.33E-03 |
| 57 | GO:0004605: phosphatidate cytidylyltransferase activity | 2.52E-03 |
| 58 | GO:0004332: fructose-bisphosphate aldolase activity | 2.52E-03 |
| 59 | GO:0004526: ribonuclease P activity | 2.52E-03 |
| 60 | GO:0004124: cysteine synthase activity | 3.03E-03 |
| 61 | GO:0008195: phosphatidate phosphatase activity | 3.03E-03 |
| 62 | GO:0004017: adenylate kinase activity | 3.03E-03 |
| 63 | GO:0016597: amino acid binding | 3.31E-03 |
| 64 | GO:0004427: inorganic diphosphatase activity | 3.58E-03 |
| 65 | GO:0003924: GTPase activity | 4.10E-03 |
| 66 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 4.74E-03 |
| 67 | GO:0003747: translation release factor activity | 5.37E-03 |
| 68 | GO:0009672: auxin:proton symporter activity | 6.03E-03 |
| 69 | GO:0000287: magnesium ion binding | 7.96E-03 |
| 70 | GO:0043621: protein self-association | 8.08E-03 |
| 71 | GO:0000049: tRNA binding | 8.17E-03 |
| 72 | GO:0015095: magnesium ion transmembrane transporter activity | 8.93E-03 |
| 73 | GO:0005262: calcium channel activity | 8.93E-03 |
| 74 | GO:0004565: beta-galactosidase activity | 8.93E-03 |
| 75 | GO:0010329: auxin efflux transmembrane transporter activity | 8.93E-03 |
| 76 | GO:0008266: poly(U) RNA binding | 9.72E-03 |
| 77 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 9.72E-03 |
| 78 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.14E-02 |
| 79 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.14E-02 |
| 80 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.14E-02 |
| 81 | GO:0051087: chaperone binding | 1.31E-02 |
| 82 | GO:0008408: 3'-5' exonuclease activity | 1.40E-02 |
| 83 | GO:0047134: protein-disulfide reductase activity | 1.79E-02 |
| 84 | GO:0004812: aminoacyl-tRNA ligase activity | 1.79E-02 |
| 85 | GO:0004527: exonuclease activity | 1.99E-02 |
| 86 | GO:0030170: pyridoxal phosphate binding | 2.00E-02 |
| 87 | GO:0004791: thioredoxin-disulfide reductase activity | 2.10E-02 |
| 88 | GO:0010181: FMN binding | 2.10E-02 |
| 89 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.54E-02 |
| 90 | GO:0008483: transaminase activity | 2.77E-02 |
| 91 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.77E-02 |
| 92 | GO:0005524: ATP binding | 2.82E-02 |
| 93 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.63E-02 |
| 94 | GO:0046872: metal ion binding | 3.64E-02 |
| 95 | GO:0005096: GTPase activator activity | 3.76E-02 |
| 96 | GO:0030145: manganese ion binding | 4.03E-02 |
| 97 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 4.30E-02 |
| 98 | GO:0003993: acid phosphatase activity | 4.43E-02 |