Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G55480

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015979: photosynthesis1.25E-10
2GO:0009773: photosynthetic electron transport in photosystem I3.32E-06
3GO:0010207: photosystem II assembly5.53E-06
4GO:0046900: tetrahydrofolylpolyglutamate metabolic process8.12E-06
5GO:1904966: positive regulation of vitamin E biosynthetic process8.12E-06
6GO:1904964: positive regulation of phytol biosynthetic process8.12E-06
7GO:0051775: response to redox state8.12E-06
8GO:0071277: cellular response to calcium ion8.12E-06
9GO:0030388: fructose 1,6-bisphosphate metabolic process2.19E-05
10GO:1902326: positive regulation of chlorophyll biosynthetic process2.19E-05
11GO:0006000: fructose metabolic process3.99E-05
12GO:0018298: protein-chromophore linkage5.60E-05
13GO:0071484: cellular response to light intensity6.14E-05
14GO:0006107: oxaloacetate metabolic process6.14E-05
15GO:0006734: NADH metabolic process8.58E-05
16GO:0009765: photosynthesis, light harvesting8.58E-05
17GO:0006461: protein complex assembly1.12E-04
18GO:0009735: response to cytokinin1.17E-04
19GO:0009772: photosynthetic electron transport in photosystem II2.04E-04
20GO:0010196: nonphotochemical quenching2.04E-04
21GO:0009704: de-etiolation2.37E-04
22GO:0005978: glycogen biosynthetic process2.37E-04
23GO:0006002: fructose 6-phosphate metabolic process2.71E-04
24GO:0009657: plastid organization2.71E-04
25GO:0010206: photosystem II repair3.07E-04
26GO:0090333: regulation of stomatal closure3.07E-04
27GO:0042761: very long-chain fatty acid biosynthetic process3.43E-04
28GO:0016925: protein sumoylation4.58E-04
29GO:0006108: malate metabolic process4.98E-04
30GO:0006094: gluconeogenesis4.98E-04
31GO:0005986: sucrose biosynthetic process4.98E-04
32GO:0006541: glutamine metabolic process5.39E-04
33GO:0019253: reductive pentose-phosphate cycle5.39E-04
34GO:0005985: sucrose metabolic process5.80E-04
35GO:0006636: unsaturated fatty acid biosynthetic process6.22E-04
36GO:0009768: photosynthesis, light harvesting in photosystem I7.09E-04
37GO:0006662: glycerol ether metabolic process1.03E-03
38GO:0015986: ATP synthesis coupled proton transport1.08E-03
39GO:0019252: starch biosynthetic process1.13E-03
40GO:0010218: response to far red light1.91E-03
41GO:0009637: response to blue light2.10E-03
42GO:0034599: cellular response to oxidative stress2.16E-03
43GO:0006099: tricarboxylic acid cycle2.16E-03
44GO:0010114: response to red light2.49E-03
45GO:0009624: response to nematode3.86E-03
46GO:0009409: response to cold4.36E-03
47GO:0045454: cell redox homeostasis1.00E-02
48GO:0055085: transmembrane transport2.06E-02
49GO:0055114: oxidation-reduction process2.57E-02
50GO:0009414: response to water deprivation2.83E-02
51GO:0042742: defense response to bacterium2.88E-02
52GO:0006979: response to oxidative stress2.90E-02
53GO:0006810: transport3.79E-02
54GO:0005975: carbohydrate metabolic process3.88E-02
55GO:0046686: response to cadmium ion3.95E-02
RankGO TermAdjusted P value
1GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
2GO:0008242: omega peptidase activity8.12E-06
3GO:0008746: NAD(P)+ transhydrogenase activity8.12E-06
4GO:0034722: gamma-glutamyl-peptidase activity2.19E-05
5GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity2.19E-05
6GO:0019948: SUMO activating enzyme activity3.99E-05
7GO:0016168: chlorophyll binding4.37E-05
8GO:0008878: glucose-1-phosphate adenylyltransferase activity8.58E-05
9GO:0043495: protein anchor8.58E-05
10GO:0016615: malate dehydrogenase activity1.41E-04
11GO:0030060: L-malate dehydrogenase activity1.71E-04
12GO:0019899: enzyme binding2.04E-04
13GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water2.71E-04
14GO:0031409: pigment binding6.22E-04
15GO:0022891: substrate-specific transmembrane transporter activity8.44E-04
16GO:0047134: protein-disulfide reductase activity9.38E-04
17GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.03E-03
18GO:0004791: thioredoxin-disulfide reductase activity1.08E-03
19GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.29E-03
20GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.91E-03
21GO:0015035: protein disulfide oxidoreductase activity3.94E-03
22GO:0016491: oxidoreductase activity4.25E-03
23GO:0016829: lyase activity4.75E-03
24GO:0042802: identical protein binding6.62E-03
25GO:0009055: electron carrier activity1.22E-02
26GO:0016887: ATPase activity1.58E-02
27GO:0005507: copper ion binding2.24E-02
28GO:0003824: catalytic activity3.08E-02
29GO:0005215: transporter activity3.10E-02
30GO:0005515: protein binding4.19E-02
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Gene type



Gene DE type