Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G55260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006066: alcohol metabolic process0.00E+00
2GO:0009768: photosynthesis, light harvesting in photosystem I3.11E-06
3GO:0018298: protein-chromophore linkage3.59E-05
4GO:0010218: response to far red light4.19E-05
5GO:0042761: very long-chain fatty acid biosynthetic process4.56E-05
6GO:0009637: response to blue light5.20E-05
7GO:0006637: acyl-CoA metabolic process5.64E-05
8GO:0019510: S-adenosylhomocysteine catabolic process5.64E-05
9GO:0009644: response to high light intensity8.62E-05
10GO:0006636: unsaturated fatty acid biosynthetic process1.30E-04
11GO:0015979: photosynthesis1.30E-04
12GO:0033353: S-adenosylmethionine cycle1.37E-04
13GO:0042819: vitamin B6 biosynthetic process1.37E-04
14GO:0031408: oxylipin biosynthetic process1.80E-04
15GO:0090391: granum assembly2.34E-04
16GO:0006081: cellular aldehyde metabolic process2.34E-04
17GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis3.41E-04
18GO:0071484: cellular response to light intensity3.41E-04
19GO:0042823: pyridoxal phosphate biosynthetic process3.41E-04
20GO:0008654: phospholipid biosynthetic process3.49E-04
21GO:0006546: glycine catabolic process4.56E-04
22GO:0006021: inositol biosynthetic process4.56E-04
23GO:0019464: glycine decarboxylation via glycine cleavage system4.56E-04
24GO:0006183: GTP biosynthetic process4.56E-04
25GO:0010600: regulation of auxin biosynthetic process4.56E-04
26GO:0016126: sterol biosynthetic process5.36E-04
27GO:0010117: photoprotection5.78E-04
28GO:0010190: cytochrome b6f complex assembly7.07E-04
29GO:0010264: myo-inositol hexakisphosphate biosynthetic process7.07E-04
30GO:0010244: response to low fluence blue light stimulus by blue low-fluence system8.44E-04
31GO:0009645: response to low light intensity stimulus9.85E-04
32GO:0010196: nonphotochemical quenching9.85E-04
33GO:0009769: photosynthesis, light harvesting in photosystem II9.85E-04
34GO:0050829: defense response to Gram-negative bacterium9.85E-04
35GO:0010114: response to red light1.10E-03
36GO:0010928: regulation of auxin mediated signaling pathway1.13E-03
37GO:0032544: plastid translation1.29E-03
38GO:0071482: cellular response to light stimulus1.29E-03
39GO:0009245: lipid A biosynthetic process1.45E-03
40GO:0010205: photoinhibition1.62E-03
41GO:0009773: photosynthetic electron transport in photosystem I1.97E-03
42GO:0055114: oxidation-reduction process2.12E-03
43GO:0010143: cutin biosynthetic process2.56E-03
44GO:0009695: jasmonic acid biosynthetic process3.40E-03
45GO:0019953: sexual reproduction3.40E-03
46GO:0009269: response to desiccation3.63E-03
47GO:0030245: cellulose catabolic process3.86E-03
48GO:0006730: one-carbon metabolic process3.86E-03
49GO:0009693: ethylene biosynthetic process4.10E-03
50GO:0006662: glycerol ether metabolic process5.09E-03
51GO:0006814: sodium ion transport5.35E-03
52GO:0009646: response to absence of light5.35E-03
53GO:0010193: response to ozone5.88E-03
54GO:0010583: response to cyclopentenone6.15E-03
55GO:0080167: response to karrikin6.77E-03
56GO:0051607: defense response to virus7.29E-03
57GO:0010027: thylakoid membrane organization7.59E-03
58GO:0034599: cellular response to oxidative stress1.11E-02
59GO:0042542: response to hydrogen peroxide1.25E-02
60GO:0009585: red, far-red light phototransduction1.59E-02
61GO:0010224: response to UV-B1.63E-02
62GO:0006857: oligopeptide transport1.67E-02
63GO:0009416: response to light stimulus1.78E-02
64GO:0043086: negative regulation of catalytic activity1.79E-02
65GO:0009611: response to wounding1.82E-02
66GO:0042545: cell wall modification2.00E-02
67GO:0009624: response to nematode2.04E-02
68GO:0006396: RNA processing2.09E-02
69GO:0055085: transmembrane transport2.26E-02
70GO:0009790: embryo development2.68E-02
71GO:0006633: fatty acid biosynthetic process2.82E-02
72GO:0016036: cellular response to phosphate starvation2.87E-02
73GO:0045490: pectin catabolic process3.02E-02
74GO:0009414: response to water deprivation3.52E-02
75GO:0071555: cell wall organization3.61E-02
76GO:0009658: chloroplast organization4.12E-02
RankGO TermAdjusted P value
1GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
2GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
3GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
4GO:0046577: long-chain-alcohol oxidase activity0.00E+00
5GO:0031409: pigment binding2.15E-06
6GO:0004506: squalene monooxygenase activity3.37E-06
7GO:0016168: chlorophyll binding2.57E-05
8GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water2.97E-05
9GO:0004321: fatty-acyl-CoA synthase activity5.64E-05
10GO:0030794: (S)-coclaurine-N-methyltransferase activity5.64E-05
11GO:0004451: isocitrate lyase activity5.64E-05
12GO:0004013: adenosylhomocysteinase activity5.64E-05
13GO:0003938: IMP dehydrogenase activity1.37E-04
14GO:0004512: inositol-3-phosphate synthase activity1.37E-04
15GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity1.37E-04
16GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity2.34E-04
17GO:0004375: glycine dehydrogenase (decarboxylating) activity3.41E-04
18GO:0048038: quinone binding3.73E-04
19GO:0016791: phosphatase activity4.52E-04
20GO:0004029: aldehyde dehydrogenase (NAD) activity7.07E-04
21GO:0031177: phosphopantetheine binding7.07E-04
22GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity7.07E-04
23GO:0050660: flavin adenine dinucleotide binding8.42E-04
24GO:0000035: acyl binding8.44E-04
25GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.13E-03
26GO:0016207: 4-coumarate-CoA ligase activity1.45E-03
27GO:0047617: acyl-CoA hydrolase activity1.62E-03
28GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.62E-03
29GO:0016746: transferase activity, transferring acyl groups2.13E-03
30GO:0016491: oxidoreductase activity2.21E-03
31GO:0005315: inorganic phosphate transmembrane transporter activity2.36E-03
32GO:0004565: beta-galactosidase activity2.36E-03
33GO:0003954: NADH dehydrogenase activity3.18E-03
34GO:0046910: pectinesterase inhibitor activity3.31E-03
35GO:0008810: cellulase activity4.10E-03
36GO:0008514: organic anion transmembrane transporter activity4.34E-03
37GO:0047134: protein-disulfide reductase activity4.58E-03
38GO:0008080: N-acetyltransferase activity5.09E-03
39GO:0004791: thioredoxin-disulfide reductase activity5.35E-03
40GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.43E-03
41GO:0004721: phosphoprotein phosphatase activity8.50E-03
42GO:0030145: manganese ion binding1.01E-02
43GO:0009055: electron carrier activity1.07E-02
44GO:0015293: symporter activity1.40E-02
45GO:0051287: NAD binding1.48E-02
46GO:0016298: lipase activity1.63E-02
47GO:0045330: aspartyl esterase activity1.71E-02
48GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.83E-02
49GO:0016874: ligase activity1.96E-02
50GO:0030599: pectinesterase activity1.96E-02
51GO:0016787: hydrolase activity1.96E-02
52GO:0015035: protein disulfide oxidoreductase activity2.09E-02
53GO:0015144: carbohydrate transmembrane transporter activity2.73E-02
54GO:0005351: sugar:proton symporter activity2.97E-02
55GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.58E-02
56GO:0005215: transporter activity3.98E-02
57GO:0008168: methyltransferase activity4.01E-02
58GO:0046982: protein heterodimerization activity4.06E-02
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Gene type



Gene DE type