GO Enrichment Analysis of Co-expressed Genes with
AT1G54740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 2 | GO:0042966: biotin carboxyl carrier protein biosynthetic process | 0.00E+00 |
| 3 | GO:0051171: regulation of nitrogen compound metabolic process | 4.45E-05 |
| 4 | GO:0043087: regulation of GTPase activity | 4.45E-05 |
| 5 | GO:0006264: mitochondrial DNA replication | 4.45E-05 |
| 6 | GO:0033259: plastid DNA replication | 4.45E-05 |
| 7 | GO:0031648: protein destabilization | 1.10E-04 |
| 8 | GO:0015804: neutral amino acid transport | 1.10E-04 |
| 9 | GO:0070475: rRNA base methylation | 1.89E-04 |
| 10 | GO:0051604: protein maturation | 1.89E-04 |
| 11 | GO:0016050: vesicle organization | 1.89E-04 |
| 12 | GO:0007623: circadian rhythm | 2.72E-04 |
| 13 | GO:0010255: glucose mediated signaling pathway | 2.78E-04 |
| 14 | GO:0009067: aspartate family amino acid biosynthetic process | 2.78E-04 |
| 15 | GO:0048573: photoperiodism, flowering | 4.68E-04 |
| 16 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.75E-04 |
| 17 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 5.82E-04 |
| 18 | GO:0048527: lateral root development | 5.96E-04 |
| 19 | GO:0042372: phylloquinone biosynthetic process | 6.94E-04 |
| 20 | GO:0048280: vesicle fusion with Golgi apparatus | 6.94E-04 |
| 21 | GO:0009088: threonine biosynthetic process | 6.94E-04 |
| 22 | GO:0009648: photoperiodism | 6.94E-04 |
| 23 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 9.32E-04 |
| 24 | GO:0010078: maintenance of root meristem identity | 9.32E-04 |
| 25 | GO:0043562: cellular response to nitrogen levels | 1.06E-03 |
| 26 | GO:0051865: protein autoubiquitination | 1.19E-03 |
| 27 | GO:0009638: phototropism | 1.32E-03 |
| 28 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.32E-03 |
| 29 | GO:0009740: gibberellic acid mediated signaling pathway | 1.45E-03 |
| 30 | GO:0006896: Golgi to vacuole transport | 1.47E-03 |
| 31 | GO:0009299: mRNA transcription | 1.47E-03 |
| 32 | GO:0006535: cysteine biosynthetic process from serine | 1.47E-03 |
| 33 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.61E-03 |
| 34 | GO:0009684: indoleacetic acid biosynthetic process | 1.61E-03 |
| 35 | GO:0010588: cotyledon vascular tissue pattern formation | 1.92E-03 |
| 36 | GO:0009725: response to hormone | 1.92E-03 |
| 37 | GO:0048467: gynoecium development | 2.09E-03 |
| 38 | GO:0090351: seedling development | 2.25E-03 |
| 39 | GO:0007010: cytoskeleton organization | 2.60E-03 |
| 40 | GO:0010187: negative regulation of seed germination | 2.60E-03 |
| 41 | GO:0019344: cysteine biosynthetic process | 2.60E-03 |
| 42 | GO:0009737: response to abscisic acid | 2.87E-03 |
| 43 | GO:0003333: amino acid transmembrane transport | 2.96E-03 |
| 44 | GO:0035428: hexose transmembrane transport | 3.14E-03 |
| 45 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 3.14E-03 |
| 46 | GO:0071215: cellular response to abscisic acid stimulus | 3.33E-03 |
| 47 | GO:0042147: retrograde transport, endosome to Golgi | 3.73E-03 |
| 48 | GO:0080022: primary root development | 3.93E-03 |
| 49 | GO:0010087: phloem or xylem histogenesis | 3.93E-03 |
| 50 | GO:0009958: positive gravitropism | 4.14E-03 |
| 51 | GO:0046323: glucose import | 4.14E-03 |
| 52 | GO:0006623: protein targeting to vacuole | 4.56E-03 |
| 53 | GO:0048825: cotyledon development | 4.56E-03 |
| 54 | GO:0009851: auxin biosynthetic process | 4.56E-03 |
| 55 | GO:0009723: response to ethylene | 4.67E-03 |
| 56 | GO:0006891: intra-Golgi vesicle-mediated transport | 4.77E-03 |
| 57 | GO:0032502: developmental process | 4.99E-03 |
| 58 | GO:0006464: cellular protein modification process | 5.45E-03 |
| 59 | GO:0071805: potassium ion transmembrane transport | 5.68E-03 |
| 60 | GO:0006888: ER to Golgi vesicle-mediated transport | 6.89E-03 |
| 61 | GO:0000160: phosphorelay signal transduction system | 7.65E-03 |
| 62 | GO:0009910: negative regulation of flower development | 8.18E-03 |
| 63 | GO:0006865: amino acid transport | 8.44E-03 |
| 64 | GO:0009853: photorespiration | 8.71E-03 |
| 65 | GO:0006631: fatty acid metabolic process | 9.83E-03 |
| 66 | GO:0006897: endocytosis | 9.83E-03 |
| 67 | GO:0051707: response to other organism | 1.04E-02 |
| 68 | GO:0009644: response to high light intensity | 1.10E-02 |
| 69 | GO:0006260: DNA replication | 1.19E-02 |
| 70 | GO:0009735: response to cytokinin | 1.20E-02 |
| 71 | GO:0006355: regulation of transcription, DNA-templated | 1.22E-02 |
| 72 | GO:0009738: abscisic acid-activated signaling pathway | 1.27E-02 |
| 73 | GO:0009585: red, far-red light phototransduction | 1.28E-02 |
| 74 | GO:0006813: potassium ion transport | 1.28E-02 |
| 75 | GO:0007165: signal transduction | 1.28E-02 |
| 76 | GO:0009736: cytokinin-activated signaling pathway | 1.28E-02 |
| 77 | GO:0009416: response to light stimulus | 1.31E-02 |
| 78 | GO:0035556: intracellular signal transduction | 1.39E-02 |
| 79 | GO:0048367: shoot system development | 1.48E-02 |
| 80 | GO:0009742: brassinosteroid mediated signaling pathway | 1.72E-02 |
| 81 | GO:0016567: protein ubiquitination | 2.07E-02 |
| 82 | GO:0009651: response to salt stress | 2.34E-02 |
| 83 | GO:0040008: regulation of growth | 2.35E-02 |
| 84 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.51E-02 |
| 85 | GO:0009739: response to gibberellin | 2.63E-02 |
| 86 | GO:0010468: regulation of gene expression | 2.76E-02 |
| 87 | GO:0009826: unidimensional cell growth | 3.23E-02 |
| 88 | GO:0048366: leaf development | 3.73E-02 |
| 89 | GO:0046777: protein autophosphorylation | 4.06E-02 |
| 90 | GO:0046686: response to cadmium ion | 4.14E-02 |
| 91 | GO:0045454: cell redox homeostasis | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004078: biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity | 0.00E+00 |
| 2 | GO:0052907: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity | 0.00E+00 |
| 3 | GO:0004077: biotin-[acetyl-CoA-carboxylase] ligase activity | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 1.10E-04 |
| 6 | GO:0015172: acidic amino acid transmembrane transporter activity | 1.10E-04 |
| 7 | GO:0050017: L-3-cyanoalanine synthase activity | 1.10E-04 |
| 8 | GO:0043425: bHLH transcription factor binding | 1.10E-04 |
| 9 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 1.10E-04 |
| 10 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.89E-04 |
| 11 | GO:0004072: aspartate kinase activity | 2.78E-04 |
| 12 | GO:0015175: neutral amino acid transmembrane transporter activity | 2.78E-04 |
| 13 | GO:0008409: 5'-3' exonuclease activity | 3.73E-04 |
| 14 | GO:0010294: abscisic acid glucosyltransferase activity | 4.75E-04 |
| 15 | GO:0016846: carbon-sulfur lyase activity | 4.75E-04 |
| 16 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 4.75E-04 |
| 17 | GO:0016208: AMP binding | 5.82E-04 |
| 18 | GO:0004124: cysteine synthase activity | 6.94E-04 |
| 19 | GO:0043621: protein self-association | 8.93E-04 |
| 20 | GO:0035091: phosphatidylinositol binding | 8.93E-04 |
| 21 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.97E-03 |
| 22 | GO:0003887: DNA-directed DNA polymerase activity | 2.42E-03 |
| 23 | GO:0015079: potassium ion transmembrane transporter activity | 2.77E-03 |
| 24 | GO:0003727: single-stranded RNA binding | 3.53E-03 |
| 25 | GO:0001085: RNA polymerase II transcription factor binding | 4.14E-03 |
| 26 | GO:0005355: glucose transmembrane transporter activity | 4.35E-03 |
| 27 | GO:0004497: monooxygenase activity | 5.00E-03 |
| 28 | GO:0000156: phosphorelay response regulator activity | 5.22E-03 |
| 29 | GO:0016597: amino acid binding | 5.91E-03 |
| 30 | GO:0005096: GTPase activator activity | 7.65E-03 |
| 31 | GO:0050897: cobalt ion binding | 8.18E-03 |
| 32 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 8.18E-03 |
| 33 | GO:0000149: SNARE binding | 9.27E-03 |
| 34 | GO:0005484: SNAP receptor activity | 1.04E-02 |
| 35 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.08E-02 |
| 36 | GO:0015293: symporter activity | 1.13E-02 |
| 37 | GO:0015171: amino acid transmembrane transporter activity | 1.38E-02 |
| 38 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.55E-02 |
| 39 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.55E-02 |
| 40 | GO:0008270: zinc ion binding | 1.57E-02 |
| 41 | GO:0016874: ligase activity | 1.58E-02 |
| 42 | GO:0019825: oxygen binding | 1.87E-02 |
| 43 | GO:0030170: pyridoxal phosphate binding | 2.08E-02 |
| 44 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.12E-02 |
| 45 | GO:0015144: carbohydrate transmembrane transporter activity | 2.20E-02 |
| 46 | GO:0008565: protein transporter activity | 2.20E-02 |
| 47 | GO:0005351: sugar:proton symporter activity | 2.39E-02 |
| 48 | GO:0008017: microtubule binding | 2.51E-02 |
| 49 | GO:0005506: iron ion binding | 2.62E-02 |
| 50 | GO:0008194: UDP-glycosyltransferase activity | 2.63E-02 |
| 51 | GO:0044212: transcription regulatory region DNA binding | 2.66E-02 |
| 52 | GO:0042802: identical protein binding | 2.88E-02 |
| 53 | GO:0003682: chromatin binding | 3.45E-02 |
| 54 | GO:0004842: ubiquitin-protein transferase activity | 3.68E-02 |
| 55 | GO:0050660: flavin adenine dinucleotide binding | 3.68E-02 |
| 56 | GO:0020037: heme binding | 4.19E-02 |
| 57 | GO:0004871: signal transducer activity | 4.55E-02 |
| 58 | GO:0042803: protein homodimerization activity | 4.55E-02 |