Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G54090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010407: non-classical arabinogalactan protein metabolic process0.00E+00
2GO:0002084: protein depalmitoylation0.00E+00
3GO:0031123: RNA 3'-end processing4.60E-05
4GO:0009700: indole phytoalexin biosynthetic process4.60E-05
5GO:0042868: antisense RNA metabolic process4.60E-05
6GO:0098789: pre-mRNA cleavage required for polyadenylation4.60E-05
7GO:0015709: thiosulfate transport1.13E-04
8GO:0071422: succinate transmembrane transport1.13E-04
9GO:0042853: L-alanine catabolic process1.13E-04
10GO:0010584: pollen exine formation1.81E-04
11GO:0061158: 3'-UTR-mediated mRNA destabilization1.95E-04
12GO:0006517: protein deglycosylation1.95E-04
13GO:0060968: regulation of gene silencing1.95E-04
14GO:0006952: defense response2.00E-04
15GO:0015729: oxaloacetate transport2.85E-04
16GO:0010363: regulation of plant-type hypersensitive response3.84E-04
17GO:0051607: defense response to virus3.92E-04
18GO:0071423: malate transmembrane transport4.88E-04
19GO:0035435: phosphate ion transmembrane transport5.98E-04
20GO:1900056: negative regulation of leaf senescence8.33E-04
21GO:0080186: developmental vegetative growth8.33E-04
22GO:0008272: sulfate transport8.33E-04
23GO:0051707: response to other organism8.61E-04
24GO:0009819: drought recovery9.57E-04
25GO:0006491: N-glycan processing9.57E-04
26GO:0006002: fructose 6-phosphate metabolic process1.09E-03
27GO:0010120: camalexin biosynthetic process1.09E-03
28GO:0010112: regulation of systemic acquired resistance1.22E-03
29GO:0048589: developmental growth1.22E-03
30GO:0008202: steroid metabolic process1.36E-03
31GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.36E-03
32GO:0043069: negative regulation of programmed cell death1.51E-03
33GO:0009089: lysine biosynthetic process via diaminopimelate1.66E-03
34GO:0012501: programmed cell death1.81E-03
35GO:2000028: regulation of photoperiodism, flowering1.98E-03
36GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.98E-03
37GO:0030048: actin filament-based movement1.98E-03
38GO:0006626: protein targeting to mitochondrion1.98E-03
39GO:0010053: root epidermal cell differentiation2.31E-03
40GO:0009901: anther dehiscence2.31E-03
41GO:0031408: oxylipin biosynthetic process3.04E-03
42GO:0071456: cellular response to hypoxia3.23E-03
43GO:0009814: defense response, incompatible interaction3.23E-03
44GO:0009625: response to insect3.43E-03
45GO:0006623: protein targeting to vacuole4.68E-03
46GO:0000302: response to reactive oxygen species4.91E-03
47GO:0031047: gene silencing by RNA5.13E-03
48GO:0042742: defense response to bacterium5.32E-03
49GO:1901657: glycosyl compound metabolic process5.37E-03
50GO:0001666: response to hypoxia6.32E-03
51GO:0009627: systemic acquired resistance6.82E-03
52GO:0009751: response to salicylic acid7.57E-03
53GO:0008219: cell death7.60E-03
54GO:0006499: N-terminal protein myristoylation8.14E-03
55GO:0045087: innate immune response8.96E-03
56GO:0006839: mitochondrial transport9.82E-03
57GO:0006631: fatty acid metabolic process1.01E-02
58GO:0000209: protein polyubiquitination1.10E-02
59GO:0009636: response to toxic substance1.16E-02
60GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.23E-02
61GO:0006486: protein glycosylation1.32E-02
62GO:0006096: glycolytic process1.49E-02
63GO:0009626: plant-type hypersensitive response1.56E-02
64GO:0009620: response to fungus1.59E-02
65GO:0009058: biosynthetic process2.07E-02
66GO:0006468: protein phosphorylation2.14E-02
67GO:0010150: leaf senescence2.50E-02
68GO:0009617: response to bacterium2.84E-02
69GO:0006970: response to osmotic stress3.60E-02
70GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.08E-02
71GO:0016192: vesicle-mediated transport4.13E-02
72GO:0005975: carbohydrate metabolic process4.20E-02
73GO:0046686: response to cadmium ion4.31E-02
74GO:0045892: negative regulation of transcription, DNA-templated4.57E-02
75GO:0006869: lipid transport4.83E-02
RankGO TermAdjusted P value
1GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
2GO:0010285: L,L-diaminopimelate aminotransferase activity4.60E-05
3GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity4.60E-05
4GO:1901677: phosphate transmembrane transporter activity1.13E-04
5GO:0015117: thiosulfate transmembrane transporter activity1.13E-04
6GO:0048531: beta-1,3-galactosyltransferase activity1.13E-04
7GO:0004338: glucan exo-1,3-beta-glucosidase activity1.13E-04
8GO:0005310: dicarboxylic acid transmembrane transporter activity1.95E-04
9GO:0015141: succinate transmembrane transporter activity1.95E-04
10GO:0017077: oxidative phosphorylation uncoupler activity2.85E-04
11GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.85E-04
12GO:0015131: oxaloacetate transmembrane transporter activity2.85E-04
13GO:0004040: amidase activity4.88E-04
14GO:0043531: ADP binding5.67E-04
15GO:0008474: palmitoyl-(protein) hydrolase activity5.98E-04
16GO:0004620: phospholipase activity8.33E-04
17GO:0102425: myricetin 3-O-glucosyltransferase activity8.33E-04
18GO:0102360: daphnetin 3-O-glucosyltransferase activity8.33E-04
19GO:0003872: 6-phosphofructokinase activity8.33E-04
20GO:0015140: malate transmembrane transporter activity8.33E-04
21GO:0008312: 7S RNA binding9.57E-04
22GO:0047893: flavonol 3-O-glucosyltransferase activity9.57E-04
23GO:0008142: oxysterol binding1.09E-03
24GO:0047372: acylglycerol lipase activity1.66E-03
25GO:0015116: sulfate transmembrane transporter activity1.81E-03
26GO:0008378: galactosyltransferase activity1.81E-03
27GO:0016758: transferase activity, transferring hexosyl groups1.94E-03
28GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.14E-03
29GO:0003774: motor activity2.14E-03
30GO:0031624: ubiquitin conjugating enzyme binding2.14E-03
31GO:0030170: pyridoxal phosphate binding2.21E-03
32GO:0035251: UDP-glucosyltransferase activity3.04E-03
33GO:0008810: cellulase activity3.43E-03
34GO:0003727: single-stranded RNA binding3.63E-03
35GO:0008483: transaminase activity5.84E-03
36GO:0016798: hydrolase activity, acting on glycosyl bonds7.08E-03
37GO:0102483: scopolin beta-glucosidase activity7.08E-03
38GO:0030247: polysaccharide binding7.08E-03
39GO:0004222: metalloendopeptidase activity8.14E-03
40GO:0008422: beta-glucosidase activity9.53E-03
41GO:0004674: protein serine/threonine kinase activity1.09E-02
42GO:0016298: lipase activity1.35E-02
43GO:0008234: cysteine-type peptidase activity1.42E-02
44GO:0045735: nutrient reservoir activity1.49E-02
45GO:0080043: quercetin 3-O-glucosyltransferase activity1.59E-02
46GO:0080044: quercetin 7-O-glucosyltransferase activity1.59E-02
47GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.81E-02
48GO:0015297: antiporter activity2.42E-02
49GO:0016757: transferase activity, transferring glycosyl groups2.51E-02
50GO:0008194: UDP-glycosyltransferase activity2.71E-02
51GO:0005524: ATP binding3.11E-02
52GO:0004497: monooxygenase activity3.98E-02
53GO:0004672: protein kinase activity4.06E-02
54GO:0003729: mRNA binding4.12E-02
55GO:0061630: ubiquitin protein ligase activity4.13E-02
56GO:0052689: carboxylic ester hydrolase activity4.27E-02
57GO:0008270: zinc ion binding4.59E-02
58GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.78E-02
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Gene type



Gene DE type