GO Enrichment Analysis of Co-expressed Genes with
AT1G53800
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
2 | GO:0045184: establishment of protein localization | 0.00E+00 |
3 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
4 | GO:0006399: tRNA metabolic process | 0.00E+00 |
5 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
6 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
7 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
8 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
9 | GO:0009658: chloroplast organization | 2.06E-08 |
10 | GO:0009657: plastid organization | 2.81E-07 |
11 | GO:0009451: RNA modification | 7.11E-07 |
12 | GO:0042793: transcription from plastid promoter | 3.18E-06 |
13 | GO:1900865: chloroplast RNA modification | 3.44E-05 |
14 | GO:0016556: mRNA modification | 4.69E-05 |
15 | GO:0010020: chloroplast fission | 1.04E-04 |
16 | GO:0009793: embryo development ending in seed dormancy | 1.10E-04 |
17 | GO:0006418: tRNA aminoacylation for protein translation | 1.95E-04 |
18 | GO:0042026: protein refolding | 2.52E-04 |
19 | GO:1901259: chloroplast rRNA processing | 2.52E-04 |
20 | GO:0048437: floral organ development | 3.27E-04 |
21 | GO:0009790: embryo development | 3.47E-04 |
22 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 3.67E-04 |
23 | GO:0070509: calcium ion import | 3.67E-04 |
24 | GO:0006438: valyl-tRNA aminoacylation | 3.67E-04 |
25 | GO:0090558: plant epidermis development | 3.67E-04 |
26 | GO:0010063: positive regulation of trichoblast fate specification | 3.67E-04 |
27 | GO:0010480: microsporocyte differentiation | 3.67E-04 |
28 | GO:0042371: vitamin K biosynthetic process | 3.67E-04 |
29 | GO:0035987: endodermal cell differentiation | 3.67E-04 |
30 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.67E-04 |
31 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 3.67E-04 |
32 | GO:0006419: alanyl-tRNA aminoacylation | 3.67E-04 |
33 | GO:0042659: regulation of cell fate specification | 3.67E-04 |
34 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 3.67E-04 |
35 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 3.67E-04 |
36 | GO:0000373: Group II intron splicing | 6.01E-04 |
37 | GO:0010583: response to cyclopentenone | 6.22E-04 |
38 | GO:0048255: mRNA stabilization | 8.00E-04 |
39 | GO:1900871: chloroplast mRNA modification | 8.00E-04 |
40 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 8.00E-04 |
41 | GO:0018026: peptidyl-lysine monomethylation | 8.00E-04 |
42 | GO:0015712: hexose phosphate transport | 8.00E-04 |
43 | GO:0009662: etioplast organization | 8.00E-04 |
44 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 8.00E-04 |
45 | GO:1904143: positive regulation of carotenoid biosynthetic process | 8.00E-04 |
46 | GO:0001682: tRNA 5'-leader removal | 8.00E-04 |
47 | GO:2000123: positive regulation of stomatal complex development | 8.00E-04 |
48 | GO:0006420: arginyl-tRNA aminoacylation | 8.00E-04 |
49 | GO:0060359: response to ammonium ion | 8.00E-04 |
50 | GO:0006508: proteolysis | 8.54E-04 |
51 | GO:0010027: thylakoid membrane organization | 9.11E-04 |
52 | GO:0006954: inflammatory response | 1.29E-03 |
53 | GO:0035436: triose phosphate transmembrane transport | 1.29E-03 |
54 | GO:0042780: tRNA 3'-end processing | 1.29E-03 |
55 | GO:0001578: microtubule bundle formation | 1.29E-03 |
56 | GO:0043157: response to cation stress | 1.29E-03 |
57 | GO:0005977: glycogen metabolic process | 1.29E-03 |
58 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 1.29E-03 |
59 | GO:0001927: exocyst assembly | 1.29E-03 |
60 | GO:0045910: negative regulation of DNA recombination | 1.29E-03 |
61 | GO:0048281: inflorescence morphogenesis | 1.29E-03 |
62 | GO:0090708: specification of plant organ axis polarity | 1.29E-03 |
63 | GO:0010207: photosystem II assembly | 1.38E-03 |
64 | GO:0051601: exocyst localization | 1.87E-03 |
65 | GO:0031048: chromatin silencing by small RNA | 1.87E-03 |
66 | GO:0010148: transpiration | 1.87E-03 |
67 | GO:0051289: protein homotetramerization | 1.87E-03 |
68 | GO:2001141: regulation of RNA biosynthetic process | 1.87E-03 |
69 | GO:1902476: chloride transmembrane transport | 1.87E-03 |
70 | GO:0010071: root meristem specification | 1.87E-03 |
71 | GO:0051513: regulation of monopolar cell growth | 1.87E-03 |
72 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.87E-03 |
73 | GO:0010239: chloroplast mRNA processing | 1.87E-03 |
74 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.87E-03 |
75 | GO:0019048: modulation by virus of host morphology or physiology | 1.87E-03 |
76 | GO:0051302: regulation of cell division | 2.11E-03 |
77 | GO:0009416: response to light stimulus | 2.35E-03 |
78 | GO:2000038: regulation of stomatal complex development | 2.51E-03 |
79 | GO:0006221: pyrimidine nucleotide biosynthetic process | 2.51E-03 |
80 | GO:0051567: histone H3-K9 methylation | 2.51E-03 |
81 | GO:0015713: phosphoglycerate transport | 2.51E-03 |
82 | GO:0044205: 'de novo' UMP biosynthetic process | 2.51E-03 |
83 | GO:0010021: amylopectin biosynthetic process | 2.51E-03 |
84 | GO:0006479: protein methylation | 2.51E-03 |
85 | GO:0051322: anaphase | 2.51E-03 |
86 | GO:0030104: water homeostasis | 2.51E-03 |
87 | GO:0006730: one-carbon metabolic process | 2.54E-03 |
88 | GO:0009664: plant-type cell wall organization | 3.16E-03 |
89 | GO:0010236: plastoquinone biosynthetic process | 3.21E-03 |
90 | GO:0048497: maintenance of floral organ identity | 3.21E-03 |
91 | GO:0009107: lipoate biosynthetic process | 3.21E-03 |
92 | GO:0010158: abaxial cell fate specification | 3.21E-03 |
93 | GO:0010375: stomatal complex patterning | 3.21E-03 |
94 | GO:0008033: tRNA processing | 3.53E-03 |
95 | GO:0048868: pollen tube development | 3.80E-03 |
96 | GO:0016458: gene silencing | 3.96E-03 |
97 | GO:0050665: hydrogen peroxide biosynthetic process | 3.96E-03 |
98 | GO:0009959: negative gravitropism | 3.96E-03 |
99 | GO:0009913: epidermal cell differentiation | 3.96E-03 |
100 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.96E-03 |
101 | GO:0016554: cytidine to uridine editing | 3.96E-03 |
102 | GO:0009082: branched-chain amino acid biosynthetic process | 4.78E-03 |
103 | GO:0006458: 'de novo' protein folding | 4.78E-03 |
104 | GO:0009942: longitudinal axis specification | 4.78E-03 |
105 | GO:0009099: valine biosynthetic process | 4.78E-03 |
106 | GO:0009854: oxidative photosynthetic carbon pathway | 4.78E-03 |
107 | GO:2000067: regulation of root morphogenesis | 4.78E-03 |
108 | GO:0042372: phylloquinone biosynthetic process | 4.78E-03 |
109 | GO:0010050: vegetative phase change | 5.64E-03 |
110 | GO:0010444: guard mother cell differentiation | 5.64E-03 |
111 | GO:0006400: tRNA modification | 5.64E-03 |
112 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 5.64E-03 |
113 | GO:0010103: stomatal complex morphogenesis | 5.64E-03 |
114 | GO:0048528: post-embryonic root development | 5.64E-03 |
115 | GO:0009772: photosynthetic electron transport in photosystem II | 5.64E-03 |
116 | GO:0006821: chloride transport | 5.64E-03 |
117 | GO:0070370: cellular heat acclimation | 5.64E-03 |
118 | GO:0009828: plant-type cell wall loosening | 5.69E-03 |
119 | GO:0009850: auxin metabolic process | 6.56E-03 |
120 | GO:0006353: DNA-templated transcription, termination | 6.56E-03 |
121 | GO:0070413: trehalose metabolism in response to stress | 6.56E-03 |
122 | GO:0055075: potassium ion homeostasis | 6.56E-03 |
123 | GO:0048564: photosystem I assembly | 6.56E-03 |
124 | GO:0001522: pseudouridine synthesis | 6.56E-03 |
125 | GO:0001510: RNA methylation | 7.52E-03 |
126 | GO:0009097: isoleucine biosynthetic process | 7.52E-03 |
127 | GO:0010204: defense response signaling pathway, resistance gene-independent | 7.52E-03 |
128 | GO:0007389: pattern specification process | 7.52E-03 |
129 | GO:0071482: cellular response to light stimulus | 7.52E-03 |
130 | GO:0001558: regulation of cell growth | 7.52E-03 |
131 | GO:0060321: acceptance of pollen | 7.52E-03 |
132 | GO:0005975: carbohydrate metabolic process | 7.70E-03 |
133 | GO:0000902: cell morphogenesis | 8.54E-03 |
134 | GO:0006098: pentose-phosphate shunt | 8.54E-03 |
135 | GO:0048481: plant ovule development | 8.88E-03 |
136 | GO:0031425: chloroplast RNA processing | 9.60E-03 |
137 | GO:0009638: phototropism | 9.60E-03 |
138 | GO:2000280: regulation of root development | 9.60E-03 |
139 | GO:0009098: leucine biosynthetic process | 9.60E-03 |
140 | GO:0006535: cysteine biosynthetic process from serine | 1.07E-02 |
141 | GO:0030422: production of siRNA involved in RNA interference | 1.07E-02 |
142 | GO:0006298: mismatch repair | 1.07E-02 |
143 | GO:0006259: DNA metabolic process | 1.07E-02 |
144 | GO:0009073: aromatic amino acid family biosynthetic process | 1.19E-02 |
145 | GO:0006352: DNA-templated transcription, initiation | 1.19E-02 |
146 | GO:0048229: gametophyte development | 1.19E-02 |
147 | GO:0010015: root morphogenesis | 1.19E-02 |
148 | GO:0006265: DNA topological change | 1.19E-02 |
149 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.31E-02 |
150 | GO:0045037: protein import into chloroplast stroma | 1.31E-02 |
151 | GO:0010582: floral meristem determinacy | 1.31E-02 |
152 | GO:0009785: blue light signaling pathway | 1.43E-02 |
153 | GO:0009691: cytokinin biosynthetic process | 1.43E-02 |
154 | GO:0050826: response to freezing | 1.43E-02 |
155 | GO:0010075: regulation of meristem growth | 1.43E-02 |
156 | GO:0006094: gluconeogenesis | 1.43E-02 |
157 | GO:0009934: regulation of meristem structural organization | 1.56E-02 |
158 | GO:0090351: seedling development | 1.69E-02 |
159 | GO:0070588: calcium ion transmembrane transport | 1.69E-02 |
160 | GO:0006833: water transport | 1.82E-02 |
161 | GO:0005992: trehalose biosynthetic process | 1.96E-02 |
162 | GO:0019344: cysteine biosynthetic process | 1.96E-02 |
163 | GO:0009116: nucleoside metabolic process | 1.96E-02 |
164 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.96E-02 |
165 | GO:0006364: rRNA processing | 1.97E-02 |
166 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.04E-02 |
167 | GO:0010073: meristem maintenance | 2.11E-02 |
168 | GO:0019953: sexual reproduction | 2.11E-02 |
169 | GO:0006306: DNA methylation | 2.25E-02 |
170 | GO:0016998: cell wall macromolecule catabolic process | 2.25E-02 |
171 | GO:0015992: proton transport | 2.25E-02 |
172 | GO:0061077: chaperone-mediated protein folding | 2.25E-02 |
173 | GO:0007005: mitochondrion organization | 2.40E-02 |
174 | GO:0016226: iron-sulfur cluster assembly | 2.40E-02 |
175 | GO:0080167: response to karrikin | 2.49E-02 |
176 | GO:0010082: regulation of root meristem growth | 2.56E-02 |
177 | GO:0001944: vasculature development | 2.56E-02 |
178 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.56E-02 |
179 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.60E-02 |
180 | GO:0042127: regulation of cell proliferation | 2.71E-02 |
181 | GO:0009306: protein secretion | 2.71E-02 |
182 | GO:0009553: embryo sac development | 2.72E-02 |
183 | GO:0000226: microtubule cytoskeleton organization | 3.04E-02 |
184 | GO:0048653: anther development | 3.04E-02 |
185 | GO:0006662: glycerol ether metabolic process | 3.20E-02 |
186 | GO:0010305: leaf vascular tissue pattern formation | 3.20E-02 |
187 | GO:0006342: chromatin silencing | 3.20E-02 |
188 | GO:0009741: response to brassinosteroid | 3.20E-02 |
189 | GO:0048544: recognition of pollen | 3.37E-02 |
190 | GO:0007059: chromosome segregation | 3.37E-02 |
191 | GO:0009646: response to absence of light | 3.37E-02 |
192 | GO:0048825: cotyledon development | 3.55E-02 |
193 | GO:0019252: starch biosynthetic process | 3.55E-02 |
194 | GO:0008654: phospholipid biosynthetic process | 3.55E-02 |
195 | GO:0009851: auxin biosynthetic process | 3.55E-02 |
196 | GO:0002229: defense response to oomycetes | 3.72E-02 |
197 | GO:0032502: developmental process | 3.90E-02 |
198 | GO:0009630: gravitropism | 3.90E-02 |
199 | GO:0006464: cellular protein modification process | 4.27E-02 |
200 | GO:0010252: auxin homeostasis | 4.27E-02 |
201 | GO:0007267: cell-cell signaling | 4.45E-02 |
202 | GO:0051607: defense response to virus | 4.64E-02 |
203 | GO:0000910: cytokinesis | 4.64E-02 |
204 | GO:0001666: response to hypoxia | 4.83E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
2 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
3 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
4 | GO:0016428: tRNA (cytosine-5-)-methyltransferase activity | 0.00E+00 |
5 | GO:0070009: serine-type aminopeptidase activity | 0.00E+00 |
6 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
7 | GO:0004519: endonuclease activity | 4.03E-09 |
8 | GO:0003723: RNA binding | 1.25E-06 |
9 | GO:0008237: metallopeptidase activity | 4.58E-06 |
10 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 6.07E-06 |
11 | GO:0004176: ATP-dependent peptidase activity | 1.16E-05 |
12 | GO:0001872: (1->3)-beta-D-glucan binding | 4.69E-05 |
13 | GO:0004812: aminoacyl-tRNA ligase activity | 3.56E-04 |
14 | GO:0016274: protein-arginine N-methyltransferase activity | 3.67E-04 |
15 | GO:0004813: alanine-tRNA ligase activity | 3.67E-04 |
16 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.67E-04 |
17 | GO:0052381: tRNA dimethylallyltransferase activity | 3.67E-04 |
18 | GO:0004160: dihydroxy-acid dehydratase activity | 3.67E-04 |
19 | GO:0004832: valine-tRNA ligase activity | 3.67E-04 |
20 | GO:0004830: tryptophan-tRNA ligase activity | 3.67E-04 |
21 | GO:0005227: calcium activated cation channel activity | 3.67E-04 |
22 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 3.67E-04 |
23 | GO:0019156: isoamylase activity | 8.00E-04 |
24 | GO:0017118: lipoyltransferase activity | 8.00E-04 |
25 | GO:0003852: 2-isopropylmalate synthase activity | 8.00E-04 |
26 | GO:0004814: arginine-tRNA ligase activity | 8.00E-04 |
27 | GO:0016415: octanoyltransferase activity | 8.00E-04 |
28 | GO:0004047: aminomethyltransferase activity | 8.00E-04 |
29 | GO:0044183: protein binding involved in protein folding | 9.51E-04 |
30 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 1.29E-03 |
31 | GO:0016805: dipeptidase activity | 1.29E-03 |
32 | GO:0071917: triose-phosphate transmembrane transporter activity | 1.29E-03 |
33 | GO:0017150: tRNA dihydrouridine synthase activity | 1.29E-03 |
34 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.38E-03 |
35 | GO:0004222: metalloendopeptidase activity | 1.44E-03 |
36 | GO:0009041: uridylate kinase activity | 1.87E-03 |
37 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.87E-03 |
38 | GO:0035197: siRNA binding | 1.87E-03 |
39 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.87E-03 |
40 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.87E-03 |
41 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 1.87E-03 |
42 | GO:0019199: transmembrane receptor protein kinase activity | 2.51E-03 |
43 | GO:0005253: anion channel activity | 2.51E-03 |
44 | GO:0042277: peptide binding | 2.51E-03 |
45 | GO:0008891: glycolate oxidase activity | 2.51E-03 |
46 | GO:0015120: phosphoglycerate transmembrane transporter activity | 2.51E-03 |
47 | GO:0004659: prenyltransferase activity | 2.51E-03 |
48 | GO:0016279: protein-lysine N-methyltransferase activity | 2.51E-03 |
49 | GO:0001053: plastid sigma factor activity | 2.51E-03 |
50 | GO:0016836: hydro-lyase activity | 2.51E-03 |
51 | GO:0016987: sigma factor activity | 2.51E-03 |
52 | GO:0043621: protein self-association | 2.62E-03 |
53 | GO:0005275: amine transmembrane transporter activity | 3.21E-03 |
54 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 3.21E-03 |
55 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 3.21E-03 |
56 | GO:0005524: ATP binding | 3.89E-03 |
57 | GO:0004556: alpha-amylase activity | 3.96E-03 |
58 | GO:0005247: voltage-gated chloride channel activity | 3.96E-03 |
59 | GO:0030983: mismatched DNA binding | 3.96E-03 |
60 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.96E-03 |
61 | GO:0004332: fructose-bisphosphate aldolase activity | 3.96E-03 |
62 | GO:0004526: ribonuclease P activity | 3.96E-03 |
63 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.08E-03 |
64 | GO:0004124: cysteine synthase activity | 4.78E-03 |
65 | GO:0008195: phosphatidate phosphatase activity | 4.78E-03 |
66 | GO:0004427: inorganic diphosphatase activity | 5.64E-03 |
67 | GO:0016887: ATPase activity | 6.40E-03 |
68 | GO:0016597: amino acid binding | 6.42E-03 |
69 | GO:0043022: ribosome binding | 6.56E-03 |
70 | GO:0019843: rRNA binding | 7.24E-03 |
71 | GO:0008173: RNA methyltransferase activity | 7.52E-03 |
72 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 7.52E-03 |
73 | GO:0030247: polysaccharide binding | 8.01E-03 |
74 | GO:0009672: auxin:proton symporter activity | 9.60E-03 |
75 | GO:0004805: trehalose-phosphatase activity | 1.07E-02 |
76 | GO:0003993: acid phosphatase activity | 1.18E-02 |
77 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.29E-02 |
78 | GO:0000049: tRNA binding | 1.31E-02 |
79 | GO:0004521: endoribonuclease activity | 1.31E-02 |
80 | GO:0004565: beta-galactosidase activity | 1.43E-02 |
81 | GO:0010329: auxin efflux transmembrane transporter activity | 1.43E-02 |
82 | GO:0005262: calcium channel activity | 1.43E-02 |
83 | GO:0009982: pseudouridine synthase activity | 1.43E-02 |
84 | GO:0004185: serine-type carboxypeptidase activity | 1.46E-02 |
85 | GO:0008168: methyltransferase activity | 1.81E-02 |
86 | GO:0033612: receptor serine/threonine kinase binding | 2.25E-02 |
87 | GO:0008408: 3'-5' exonuclease activity | 2.25E-02 |
88 | GO:0004650: polygalacturonase activity | 2.56E-02 |
89 | GO:0051082: unfolded protein binding | 2.81E-02 |
90 | GO:0047134: protein-disulfide reductase activity | 2.87E-02 |
91 | GO:0008026: ATP-dependent helicase activity | 2.98E-02 |
92 | GO:0004527: exonuclease activity | 3.20E-02 |
93 | GO:0001085: RNA polymerase II transcription factor binding | 3.20E-02 |
94 | GO:0010181: FMN binding | 3.37E-02 |
95 | GO:0004791: thioredoxin-disulfide reductase activity | 3.37E-02 |
96 | GO:0005355: glucose transmembrane transporter activity | 3.37E-02 |
97 | GO:0019901: protein kinase binding | 3.55E-02 |
98 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.72E-02 |
99 | GO:0016829: lyase activity | 3.80E-02 |
100 | GO:0004518: nuclease activity | 3.90E-02 |
101 | GO:0003924: GTPase activity | 4.04E-02 |
102 | GO:0000156: phosphorelay response regulator activity | 4.08E-02 |
103 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 4.08E-02 |
104 | GO:0016791: phosphatase activity | 4.27E-02 |
105 | GO:0003684: damaged DNA binding | 4.27E-02 |
106 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.45E-02 |
107 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 4.45E-02 |