GO Enrichment Analysis of Co-expressed Genes with
AT1G53542
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 2 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 3 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 4 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 5 | GO:0042817: pyridoxal metabolic process | 0.00E+00 |
| 6 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 7 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 8 | GO:0009657: plastid organization | 2.52E-06 |
| 9 | GO:2000012: regulation of auxin polar transport | 1.34E-05 |
| 10 | GO:0040008: regulation of growth | 3.84E-05 |
| 11 | GO:0009733: response to auxin | 5.48E-05 |
| 12 | GO:0009734: auxin-activated signaling pathway | 1.23E-04 |
| 13 | GO:0019478: D-amino acid catabolic process | 1.62E-04 |
| 14 | GO:0000476: maturation of 4.5S rRNA | 1.62E-04 |
| 15 | GO:0000967: rRNA 5'-end processing | 1.62E-04 |
| 16 | GO:0043266: regulation of potassium ion transport | 1.62E-04 |
| 17 | GO:0042371: vitamin K biosynthetic process | 1.62E-04 |
| 18 | GO:2000021: regulation of ion homeostasis | 1.62E-04 |
| 19 | GO:1902458: positive regulation of stomatal opening | 1.62E-04 |
| 20 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.62E-04 |
| 21 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.62E-04 |
| 22 | GO:1900871: chloroplast mRNA modification | 3.69E-04 |
| 23 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 3.69E-04 |
| 24 | GO:0001682: tRNA 5'-leader removal | 3.69E-04 |
| 25 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.69E-04 |
| 26 | GO:0034470: ncRNA processing | 3.69E-04 |
| 27 | GO:0006739: NADP metabolic process | 3.69E-04 |
| 28 | GO:0071732: cellular response to nitric oxide | 5.00E-04 |
| 29 | GO:0006954: inflammatory response | 6.04E-04 |
| 30 | GO:0006760: folic acid-containing compound metabolic process | 6.04E-04 |
| 31 | GO:0009658: chloroplast organization | 7.49E-04 |
| 32 | GO:0016556: mRNA modification | 8.63E-04 |
| 33 | GO:0008615: pyridoxine biosynthetic process | 8.63E-04 |
| 34 | GO:0050482: arachidonic acid secretion | 8.63E-04 |
| 35 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.63E-04 |
| 36 | GO:0010239: chloroplast mRNA processing | 8.63E-04 |
| 37 | GO:0071369: cellular response to ethylene stimulus | 8.83E-04 |
| 38 | GO:0046656: folic acid biosynthetic process | 1.14E-03 |
| 39 | GO:0006734: NADH metabolic process | 1.14E-03 |
| 40 | GO:0044205: 'de novo' UMP biosynthetic process | 1.14E-03 |
| 41 | GO:0022622: root system development | 1.14E-03 |
| 42 | GO:0010236: plastoquinone biosynthetic process | 1.45E-03 |
| 43 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.45E-03 |
| 44 | GO:0000278: mitotic cell cycle | 1.45E-03 |
| 45 | GO:0071281: cellular response to iron ion | 1.66E-03 |
| 46 | GO:0032973: amino acid export | 1.78E-03 |
| 47 | GO:0010190: cytochrome b6f complex assembly | 1.78E-03 |
| 48 | GO:0050665: hydrogen peroxide biosynthetic process | 1.78E-03 |
| 49 | GO:0016554: cytidine to uridine editing | 1.78E-03 |
| 50 | GO:0034389: lipid particle organization | 2.14E-03 |
| 51 | GO:1901259: chloroplast rRNA processing | 2.14E-03 |
| 52 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 2.14E-03 |
| 53 | GO:0042372: phylloquinone biosynthetic process | 2.14E-03 |
| 54 | GO:0017148: negative regulation of translation | 2.14E-03 |
| 55 | GO:0046654: tetrahydrofolate biosynthetic process | 2.14E-03 |
| 56 | GO:0009854: oxidative photosynthetic carbon pathway | 2.14E-03 |
| 57 | GO:0080086: stamen filament development | 2.14E-03 |
| 58 | GO:0009648: photoperiodism | 2.14E-03 |
| 59 | GO:0019509: L-methionine salvage from methylthioadenosine | 2.14E-03 |
| 60 | GO:0010196: nonphotochemical quenching | 2.52E-03 |
| 61 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 2.52E-03 |
| 62 | GO:0030307: positive regulation of cell growth | 2.52E-03 |
| 63 | GO:0032880: regulation of protein localization | 2.52E-03 |
| 64 | GO:0009772: photosynthetic electron transport in photosystem II | 2.52E-03 |
| 65 | GO:0043090: amino acid import | 2.52E-03 |
| 66 | GO:0046620: regulation of organ growth | 2.91E-03 |
| 67 | GO:0006353: DNA-templated transcription, termination | 2.91E-03 |
| 68 | GO:0070413: trehalose metabolism in response to stress | 2.91E-03 |
| 69 | GO:2000070: regulation of response to water deprivation | 2.91E-03 |
| 70 | GO:0000105: histidine biosynthetic process | 2.91E-03 |
| 71 | GO:0006644: phospholipid metabolic process | 2.91E-03 |
| 72 | GO:0006526: arginine biosynthetic process | 3.33E-03 |
| 73 | GO:0010204: defense response signaling pathway, resistance gene-independent | 3.33E-03 |
| 74 | GO:0032544: plastid translation | 3.33E-03 |
| 75 | GO:0007275: multicellular organism development | 3.41E-03 |
| 76 | GO:0019432: triglyceride biosynthetic process | 3.77E-03 |
| 77 | GO:0080144: amino acid homeostasis | 3.77E-03 |
| 78 | GO:0000373: Group II intron splicing | 3.77E-03 |
| 79 | GO:1900865: chloroplast RNA modification | 4.22E-03 |
| 80 | GO:0007346: regulation of mitotic cell cycle | 4.22E-03 |
| 81 | GO:0006949: syncytium formation | 4.69E-03 |
| 82 | GO:0009773: photosynthetic electron transport in photosystem I | 5.19E-03 |
| 83 | GO:0006415: translational termination | 5.19E-03 |
| 84 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.19E-03 |
| 85 | GO:0010015: root morphogenesis | 5.19E-03 |
| 86 | GO:0010020: chloroplast fission | 6.76E-03 |
| 87 | GO:0042023: DNA endoreduplication | 7.90E-03 |
| 88 | GO:0006071: glycerol metabolic process | 7.90E-03 |
| 89 | GO:0000162: tryptophan biosynthetic process | 7.90E-03 |
| 90 | GO:0030150: protein import into mitochondrial matrix | 8.48E-03 |
| 91 | GO:0005992: trehalose biosynthetic process | 8.48E-03 |
| 92 | GO:0009116: nucleoside metabolic process | 8.48E-03 |
| 93 | GO:0016042: lipid catabolic process | 8.75E-03 |
| 94 | GO:0016575: histone deacetylation | 9.09E-03 |
| 95 | GO:0006730: one-carbon metabolic process | 1.04E-02 |
| 96 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.04E-02 |
| 97 | GO:0031348: negative regulation of defense response | 1.04E-02 |
| 98 | GO:0009686: gibberellin biosynthetic process | 1.10E-02 |
| 99 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.10E-02 |
| 100 | GO:0009306: protein secretion | 1.17E-02 |
| 101 | GO:0008284: positive regulation of cell proliferation | 1.24E-02 |
| 102 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.24E-02 |
| 103 | GO:0008033: tRNA processing | 1.31E-02 |
| 104 | GO:0006413: translational initiation | 1.38E-02 |
| 105 | GO:0009958: positive gravitropism | 1.38E-02 |
| 106 | GO:0006662: glycerol ether metabolic process | 1.38E-02 |
| 107 | GO:0010268: brassinosteroid homeostasis | 1.38E-02 |
| 108 | GO:0002229: defense response to oomycetes | 1.60E-02 |
| 109 | GO:0000302: response to reactive oxygen species | 1.60E-02 |
| 110 | GO:0016132: brassinosteroid biosynthetic process | 1.60E-02 |
| 111 | GO:1901657: glycosyl compound metabolic process | 1.75E-02 |
| 112 | GO:0009828: plant-type cell wall loosening | 1.83E-02 |
| 113 | GO:0016125: sterol metabolic process | 1.83E-02 |
| 114 | GO:0009911: positive regulation of flower development | 2.07E-02 |
| 115 | GO:0010027: thylakoid membrane organization | 2.07E-02 |
| 116 | GO:0009627: systemic acquired resistance | 2.24E-02 |
| 117 | GO:0042254: ribosome biogenesis | 2.34E-02 |
| 118 | GO:0005975: carbohydrate metabolic process | 2.41E-02 |
| 119 | GO:0016311: dephosphorylation | 2.42E-02 |
| 120 | GO:0006811: ion transport | 2.69E-02 |
| 121 | GO:0048366: leaf development | 2.70E-02 |
| 122 | GO:0048527: lateral root development | 2.78E-02 |
| 123 | GO:0045087: innate immune response | 2.97E-02 |
| 124 | GO:0034599: cellular response to oxidative stress | 3.06E-02 |
| 125 | GO:0006839: mitochondrial transport | 3.26E-02 |
| 126 | GO:0045454: cell redox homeostasis | 3.40E-02 |
| 127 | GO:0009926: auxin polar transport | 3.55E-02 |
| 128 | GO:0051707: response to other organism | 3.55E-02 |
| 129 | GO:0009965: leaf morphogenesis | 3.86E-02 |
| 130 | GO:0031347: regulation of defense response | 4.07E-02 |
| 131 | GO:0009664: plant-type cell wall organization | 4.18E-02 |
| 132 | GO:0042538: hyperosmotic salinity response | 4.18E-02 |
| 133 | GO:0006364: rRNA processing | 4.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 2 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 4 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 5 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 6 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 7 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 8 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 9 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 10 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 11 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 12 | GO:0052856: NADHX epimerase activity | 1.62E-04 |
| 13 | GO:0051777: ent-kaurenoate oxidase activity | 1.62E-04 |
| 14 | GO:0052857: NADPHX epimerase activity | 1.62E-04 |
| 15 | GO:0004733: pyridoxamine-phosphate oxidase activity | 1.62E-04 |
| 16 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.62E-04 |
| 17 | GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity | 3.69E-04 |
| 18 | GO:0004150: dihydroneopterin aldolase activity | 3.69E-04 |
| 19 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 3.69E-04 |
| 20 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.69E-04 |
| 21 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 3.69E-04 |
| 22 | GO:0043621: protein self-association | 5.98E-04 |
| 23 | GO:0004557: alpha-galactosidase activity | 6.04E-04 |
| 24 | GO:0052692: raffinose alpha-galactosidase activity | 6.04E-04 |
| 25 | GO:0016788: hydrolase activity, acting on ester bonds | 7.70E-04 |
| 26 | GO:0048487: beta-tubulin binding | 8.63E-04 |
| 27 | GO:0016149: translation release factor activity, codon specific | 8.63E-04 |
| 28 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 8.63E-04 |
| 29 | GO:0043023: ribosomal large subunit binding | 8.63E-04 |
| 30 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 8.63E-04 |
| 31 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 8.63E-04 |
| 32 | GO:0008891: glycolate oxidase activity | 1.14E-03 |
| 33 | GO:0004659: prenyltransferase activity | 1.14E-03 |
| 34 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.14E-03 |
| 35 | GO:0010181: FMN binding | 1.28E-03 |
| 36 | GO:0004040: amidase activity | 1.45E-03 |
| 37 | GO:0004623: phospholipase A2 activity | 1.45E-03 |
| 38 | GO:0080030: methyl indole-3-acetate esterase activity | 1.78E-03 |
| 39 | GO:0004526: ribonuclease P activity | 1.78E-03 |
| 40 | GO:0004144: diacylglycerol O-acyltransferase activity | 2.14E-03 |
| 41 | GO:0043022: ribosome binding | 2.91E-03 |
| 42 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 3.33E-03 |
| 43 | GO:0003747: translation release factor activity | 3.77E-03 |
| 44 | GO:0004805: trehalose-phosphatase activity | 4.69E-03 |
| 45 | GO:0004565: beta-galactosidase activity | 6.22E-03 |
| 46 | GO:0015266: protein channel activity | 6.22E-03 |
| 47 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.22E-03 |
| 48 | GO:0008083: growth factor activity | 6.76E-03 |
| 49 | GO:0003714: transcription corepressor activity | 8.48E-03 |
| 50 | GO:0004407: histone deacetylase activity | 8.48E-03 |
| 51 | GO:0043130: ubiquitin binding | 8.48E-03 |
| 52 | GO:0004176: ATP-dependent peptidase activity | 9.72E-03 |
| 53 | GO:0047134: protein-disulfide reductase activity | 1.24E-02 |
| 54 | GO:0016787: hydrolase activity | 1.31E-02 |
| 55 | GO:0004791: thioredoxin-disulfide reductase activity | 1.45E-02 |
| 56 | GO:0016853: isomerase activity | 1.45E-02 |
| 57 | GO:0019901: protein kinase binding | 1.52E-02 |
| 58 | GO:0003743: translation initiation factor activity | 1.73E-02 |
| 59 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.75E-02 |
| 60 | GO:0016791: phosphatase activity | 1.83E-02 |
| 61 | GO:0008237: metallopeptidase activity | 1.91E-02 |
| 62 | GO:0003723: RNA binding | 1.95E-02 |
| 63 | GO:0102483: scopolin beta-glucosidase activity | 2.33E-02 |
| 64 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.51E-02 |
| 65 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.69E-02 |
| 66 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.78E-02 |
| 67 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.97E-02 |
| 68 | GO:0052689: carboxylic ester hydrolase activity | 3.14E-02 |
| 69 | GO:0008422: beta-glucosidase activity | 3.16E-02 |
| 70 | GO:0042393: histone binding | 3.26E-02 |
| 71 | GO:0009055: electron carrier activity | 4.48E-02 |
| 72 | GO:0004519: endonuclease activity | 4.54E-02 |
| 73 | GO:0015171: amino acid transmembrane transporter activity | 4.72E-02 |