GO Enrichment Analysis of Co-expressed Genes with
AT1G52870
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008618: 7-methylguanosine metabolic process | 0.00E+00 |
| 2 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 3 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 4 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 5 | GO:0036265: RNA (guanine-N7)-methylation | 0.00E+00 |
| 6 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
| 7 | GO:0006982: response to lipid hydroperoxide | 0.00E+00 |
| 8 | GO:0010335: response to non-ionic osmotic stress | 0.00E+00 |
| 9 | GO:0080094: response to trehalose-6-phosphate | 0.00E+00 |
| 10 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
| 11 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 12 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 13 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 14 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 15 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 16 | GO:0006021: inositol biosynthetic process | 1.26E-07 |
| 17 | GO:0009904: chloroplast accumulation movement | 4.30E-05 |
| 18 | GO:0044209: AMP salvage | 4.30E-05 |
| 19 | GO:0046855: inositol phosphate dephosphorylation | 6.36E-05 |
| 20 | GO:0009903: chloroplast avoidance movement | 8.84E-05 |
| 21 | GO:0007018: microtubule-based movement | 1.29E-04 |
| 22 | GO:0055114: oxidation-reduction process | 1.33E-04 |
| 23 | GO:0000481: maturation of 5S rRNA | 1.88E-04 |
| 24 | GO:0006659: phosphatidylserine biosynthetic process | 1.88E-04 |
| 25 | GO:0043686: co-translational protein modification | 1.88E-04 |
| 26 | GO:1902458: positive regulation of stomatal opening | 1.88E-04 |
| 27 | GO:0010028: xanthophyll cycle | 1.88E-04 |
| 28 | GO:0034337: RNA folding | 1.88E-04 |
| 29 | GO:0000305: response to oxygen radical | 1.88E-04 |
| 30 | GO:0010362: negative regulation of anion channel activity by blue light | 1.88E-04 |
| 31 | GO:0015969: guanosine tetraphosphate metabolic process | 1.88E-04 |
| 32 | GO:0006169: adenosine salvage | 1.88E-04 |
| 33 | GO:0031426: polycistronic mRNA processing | 1.88E-04 |
| 34 | GO:0009416: response to light stimulus | 3.31E-04 |
| 35 | GO:0018026: peptidyl-lysine monomethylation | 4.24E-04 |
| 36 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 4.24E-04 |
| 37 | GO:0010155: regulation of proton transport | 4.24E-04 |
| 38 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 4.24E-04 |
| 39 | GO:0051262: protein tetramerization | 4.24E-04 |
| 40 | GO:0042819: vitamin B6 biosynthetic process | 4.24E-04 |
| 41 | GO:0006790: sulfur compound metabolic process | 4.27E-04 |
| 42 | GO:0046854: phosphatidylinositol phosphorylation | 6.12E-04 |
| 43 | GO:0080055: low-affinity nitrate transport | 6.92E-04 |
| 44 | GO:2001295: malonyl-CoA biosynthetic process | 6.92E-04 |
| 45 | GO:0000913: preprophase band assembly | 6.92E-04 |
| 46 | GO:0031022: nuclear migration along microfilament | 6.92E-04 |
| 47 | GO:0006753: nucleoside phosphate metabolic process | 6.92E-04 |
| 48 | GO:0010589: leaf proximal/distal pattern formation | 6.92E-04 |
| 49 | GO:0080147: root hair cell development | 7.52E-04 |
| 50 | GO:0006168: adenine salvage | 9.86E-04 |
| 51 | GO:0006166: purine ribonucleoside salvage | 9.86E-04 |
| 52 | GO:0006020: inositol metabolic process | 9.86E-04 |
| 53 | GO:0010239: chloroplast mRNA processing | 9.86E-04 |
| 54 | GO:0006164: purine nucleotide biosynthetic process | 9.86E-04 |
| 55 | GO:0008615: pyridoxine biosynthetic process | 9.86E-04 |
| 56 | GO:0042823: pyridoxal phosphate biosynthetic process | 9.86E-04 |
| 57 | GO:2000306: positive regulation of photomorphogenesis | 1.31E-03 |
| 58 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 1.31E-03 |
| 59 | GO:0015994: chlorophyll metabolic process | 1.31E-03 |
| 60 | GO:0008295: spermidine biosynthetic process | 1.31E-03 |
| 61 | GO:0006749: glutathione metabolic process | 1.31E-03 |
| 62 | GO:0044550: secondary metabolite biosynthetic process | 1.60E-03 |
| 63 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.66E-03 |
| 64 | GO:0031365: N-terminal protein amino acid modification | 1.66E-03 |
| 65 | GO:1902183: regulation of shoot apical meristem development | 1.66E-03 |
| 66 | GO:0010158: abaxial cell fate specification | 1.66E-03 |
| 67 | GO:0009791: post-embryonic development | 1.68E-03 |
| 68 | GO:0016032: viral process | 1.92E-03 |
| 69 | GO:0010405: arabinogalactan protein metabolic process | 2.05E-03 |
| 70 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 2.05E-03 |
| 71 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.05E-03 |
| 72 | GO:0045962: positive regulation of development, heterochronic | 2.05E-03 |
| 73 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.05E-03 |
| 74 | GO:0030488: tRNA methylation | 2.46E-03 |
| 75 | GO:0042372: phylloquinone biosynthetic process | 2.46E-03 |
| 76 | GO:0048280: vesicle fusion with Golgi apparatus | 2.46E-03 |
| 77 | GO:0006400: tRNA modification | 2.90E-03 |
| 78 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 2.90E-03 |
| 79 | GO:0015937: coenzyme A biosynthetic process | 2.90E-03 |
| 80 | GO:0015995: chlorophyll biosynthetic process | 3.04E-03 |
| 81 | GO:0032508: DNA duplex unwinding | 3.36E-03 |
| 82 | GO:0018298: protein-chromophore linkage | 3.36E-03 |
| 83 | GO:2000070: regulation of response to water deprivation | 3.36E-03 |
| 84 | GO:0016559: peroxisome fission | 3.36E-03 |
| 85 | GO:0006811: ion transport | 3.71E-03 |
| 86 | GO:0015996: chlorophyll catabolic process | 3.84E-03 |
| 87 | GO:0007186: G-protein coupled receptor signaling pathway | 3.84E-03 |
| 88 | GO:0009637: response to blue light | 4.26E-03 |
| 89 | GO:0006189: 'de novo' IMP biosynthetic process | 4.35E-03 |
| 90 | GO:0098656: anion transmembrane transport | 4.35E-03 |
| 91 | GO:0048507: meristem development | 4.35E-03 |
| 92 | GO:0010206: photosystem II repair | 4.35E-03 |
| 93 | GO:2000024: regulation of leaf development | 4.35E-03 |
| 94 | GO:0009638: phototropism | 4.87E-03 |
| 95 | GO:0010018: far-red light signaling pathway | 4.87E-03 |
| 96 | GO:0010267: production of ta-siRNAs involved in RNA interference | 4.87E-03 |
| 97 | GO:0043069: negative regulation of programmed cell death | 5.42E-03 |
| 98 | GO:0045036: protein targeting to chloroplast | 5.42E-03 |
| 99 | GO:0006896: Golgi to vacuole transport | 5.42E-03 |
| 100 | GO:0006535: cysteine biosynthetic process from serine | 5.42E-03 |
| 101 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.99E-03 |
| 102 | GO:0000038: very long-chain fatty acid metabolic process | 5.99E-03 |
| 103 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.58E-03 |
| 104 | GO:0045037: protein import into chloroplast stroma | 6.58E-03 |
| 105 | GO:0006006: glucose metabolic process | 7.19E-03 |
| 106 | GO:0030036: actin cytoskeleton organization | 7.19E-03 |
| 107 | GO:0009718: anthocyanin-containing compound biosynthetic process | 7.19E-03 |
| 108 | GO:0009767: photosynthetic electron transport chain | 7.19E-03 |
| 109 | GO:0030048: actin filament-based movement | 7.19E-03 |
| 110 | GO:0009785: blue light signaling pathway | 7.19E-03 |
| 111 | GO:0010143: cutin biosynthetic process | 7.82E-03 |
| 112 | GO:0010020: chloroplast fission | 7.82E-03 |
| 113 | GO:0010207: photosystem II assembly | 7.82E-03 |
| 114 | GO:0019253: reductive pentose-phosphate cycle | 7.82E-03 |
| 115 | GO:0019853: L-ascorbic acid biosynthetic process | 8.47E-03 |
| 116 | GO:0042753: positive regulation of circadian rhythm | 9.14E-03 |
| 117 | GO:0019344: cysteine biosynthetic process | 9.83E-03 |
| 118 | GO:0000027: ribosomal large subunit assembly | 9.83E-03 |
| 119 | GO:0009944: polarity specification of adaxial/abaxial axis | 9.83E-03 |
| 120 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.05E-02 |
| 121 | GO:0008299: isoprenoid biosynthetic process | 1.05E-02 |
| 122 | GO:0007017: microtubule-based process | 1.05E-02 |
| 123 | GO:0019748: secondary metabolic process | 1.20E-02 |
| 124 | GO:0019722: calcium-mediated signaling | 1.35E-02 |
| 125 | GO:0042147: retrograde transport, endosome to Golgi | 1.43E-02 |
| 126 | GO:0010182: sugar mediated signaling pathway | 1.60E-02 |
| 127 | GO:0009741: response to brassinosteroid | 1.60E-02 |
| 128 | GO:0045489: pectin biosynthetic process | 1.60E-02 |
| 129 | GO:0010154: fruit development | 1.60E-02 |
| 130 | GO:0006520: cellular amino acid metabolic process | 1.60E-02 |
| 131 | GO:0010305: leaf vascular tissue pattern formation | 1.60E-02 |
| 132 | GO:0006633: fatty acid biosynthetic process | 1.66E-02 |
| 133 | GO:0009646: response to absence of light | 1.68E-02 |
| 134 | GO:0008654: phospholipid biosynthetic process | 1.77E-02 |
| 135 | GO:0006623: protein targeting to vacuole | 1.77E-02 |
| 136 | GO:0010183: pollen tube guidance | 1.77E-02 |
| 137 | GO:0007623: circadian rhythm | 1.83E-02 |
| 138 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.85E-02 |
| 139 | GO:0010583: response to cyclopentenone | 1.94E-02 |
| 140 | GO:0030163: protein catabolic process | 2.03E-02 |
| 141 | GO:0009639: response to red or far red light | 2.13E-02 |
| 142 | GO:0007267: cell-cell signaling | 2.22E-02 |
| 143 | GO:0000910: cytokinesis | 2.31E-02 |
| 144 | GO:0010027: thylakoid membrane organization | 2.41E-02 |
| 145 | GO:0016126: sterol biosynthetic process | 2.41E-02 |
| 146 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.71E-02 |
| 147 | GO:0009409: response to cold | 2.78E-02 |
| 148 | GO:0000160: phosphorelay signal transduction system | 3.02E-02 |
| 149 | GO:0006499: N-terminal protein myristoylation | 3.12E-02 |
| 150 | GO:0009407: toxin catabolic process | 3.12E-02 |
| 151 | GO:0007568: aging | 3.23E-02 |
| 152 | GO:0010119: regulation of stomatal movement | 3.23E-02 |
| 153 | GO:0080167: response to karrikin | 3.50E-02 |
| 154 | GO:0046777: protein autophosphorylation | 3.74E-02 |
| 155 | GO:0009744: response to sucrose | 4.13E-02 |
| 156 | GO:0045454: cell redox homeostasis | 4.18E-02 |
| 157 | GO:0042546: cell wall biogenesis | 4.24E-02 |
| 158 | GO:0009636: response to toxic substance | 4.48E-02 |
| 159 | GO:0009965: leaf morphogenesis | 4.48E-02 |
| 160 | GO:0042538: hyperosmotic salinity response | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 2 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 3 | GO:0036033: mediator complex binding | 0.00E+00 |
| 4 | GO:0008176: tRNA (guanine-N7-)-methyltransferase activity | 0.00E+00 |
| 5 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 6 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
| 7 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 8 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.70E-06 |
| 9 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.70E-06 |
| 10 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.70E-06 |
| 11 | GO:0003913: DNA photolyase activity | 6.26E-06 |
| 12 | GO:0000293: ferric-chelate reductase activity | 6.36E-05 |
| 13 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 8.84E-05 |
| 14 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.88E-04 |
| 15 | GO:0004328: formamidase activity | 1.88E-04 |
| 16 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.88E-04 |
| 17 | GO:0005227: calcium activated cation channel activity | 1.88E-04 |
| 18 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.88E-04 |
| 19 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.88E-04 |
| 20 | GO:0010945: CoA pyrophosphatase activity | 1.88E-04 |
| 21 | GO:0042586: peptide deformylase activity | 1.88E-04 |
| 22 | GO:0004001: adenosine kinase activity | 1.88E-04 |
| 23 | GO:0005506: iron ion binding | 3.42E-04 |
| 24 | GO:0008728: GTP diphosphokinase activity | 4.24E-04 |
| 25 | GO:0050017: L-3-cyanoalanine synthase activity | 4.24E-04 |
| 26 | GO:0004362: glutathione-disulfide reductase activity | 4.24E-04 |
| 27 | GO:0004766: spermidine synthase activity | 4.24E-04 |
| 28 | GO:0004512: inositol-3-phosphate synthase activity | 4.24E-04 |
| 29 | GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity | 4.24E-04 |
| 30 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.24E-04 |
| 31 | GO:0048531: beta-1,3-galactosyltransferase activity | 4.24E-04 |
| 32 | GO:0008017: microtubule binding | 5.68E-04 |
| 33 | GO:0016491: oxidoreductase activity | 6.62E-04 |
| 34 | GO:0004075: biotin carboxylase activity | 6.92E-04 |
| 35 | GO:0070402: NADPH binding | 6.92E-04 |
| 36 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 6.92E-04 |
| 37 | GO:0004148: dihydrolipoyl dehydrogenase activity | 6.92E-04 |
| 38 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 9.86E-04 |
| 39 | GO:0009882: blue light photoreceptor activity | 9.86E-04 |
| 40 | GO:0035198: miRNA binding | 9.86E-04 |
| 41 | GO:0000254: C-4 methylsterol oxidase activity | 9.86E-04 |
| 42 | GO:0048027: mRNA 5'-UTR binding | 9.86E-04 |
| 43 | GO:0003999: adenine phosphoribosyltransferase activity | 9.86E-04 |
| 44 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 9.86E-04 |
| 45 | GO:0016851: magnesium chelatase activity | 9.86E-04 |
| 46 | GO:0003777: microtubule motor activity | 1.15E-03 |
| 47 | GO:0050660: flavin adenine dinucleotide binding | 1.27E-03 |
| 48 | GO:0016279: protein-lysine N-methyltransferase activity | 1.31E-03 |
| 49 | GO:0003989: acetyl-CoA carboxylase activity | 1.66E-03 |
| 50 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.05E-03 |
| 51 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.05E-03 |
| 52 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.05E-03 |
| 53 | GO:0000210: NAD+ diphosphatase activity | 2.05E-03 |
| 54 | GO:0016208: AMP binding | 2.05E-03 |
| 55 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.09E-03 |
| 56 | GO:0005200: structural constituent of cytoskeleton | 2.30E-03 |
| 57 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.46E-03 |
| 58 | GO:0004124: cysteine synthase activity | 2.46E-03 |
| 59 | GO:0016832: aldehyde-lyase activity | 2.46E-03 |
| 60 | GO:0005261: cation channel activity | 2.46E-03 |
| 61 | GO:0009927: histidine phosphotransfer kinase activity | 2.46E-03 |
| 62 | GO:0004602: glutathione peroxidase activity | 2.46E-03 |
| 63 | GO:0019825: oxygen binding | 2.71E-03 |
| 64 | GO:0009881: photoreceptor activity | 2.90E-03 |
| 65 | GO:0043022: ribosome binding | 3.36E-03 |
| 66 | GO:0005525: GTP binding | 3.49E-03 |
| 67 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.88E-03 |
| 68 | GO:0071949: FAD binding | 4.35E-03 |
| 69 | GO:0008559: xenobiotic-transporting ATPase activity | 5.99E-03 |
| 70 | GO:0005315: inorganic phosphate transmembrane transporter activity | 7.19E-03 |
| 71 | GO:0000155: phosphorelay sensor kinase activity | 7.19E-03 |
| 72 | GO:0003725: double-stranded RNA binding | 7.19E-03 |
| 73 | GO:0008081: phosphoric diester hydrolase activity | 7.19E-03 |
| 74 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.82E-03 |
| 75 | GO:0003774: motor activity | 7.82E-03 |
| 76 | GO:0008146: sulfotransferase activity | 8.47E-03 |
| 77 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 9.02E-03 |
| 78 | GO:0031409: pigment binding | 9.14E-03 |
| 79 | GO:0016746: transferase activity, transferring acyl groups | 1.08E-02 |
| 80 | GO:0020037: heme binding | 1.11E-02 |
| 81 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.13E-02 |
| 82 | GO:0003924: GTPase activity | 1.19E-02 |
| 83 | GO:0008514: organic anion transmembrane transporter activity | 1.35E-02 |
| 84 | GO:0005524: ATP binding | 1.59E-02 |
| 85 | GO:0016853: isomerase activity | 1.68E-02 |
| 86 | GO:0010181: FMN binding | 1.68E-02 |
| 87 | GO:0003824: catalytic activity | 2.04E-02 |
| 88 | GO:0016887: ATPase activity | 2.07E-02 |
| 89 | GO:0016791: phosphatase activity | 2.13E-02 |
| 90 | GO:0042802: identical protein binding | 2.32E-02 |
| 91 | GO:0016168: chlorophyll binding | 2.51E-02 |
| 92 | GO:0004721: phosphoprotein phosphatase activity | 2.71E-02 |
| 93 | GO:0008236: serine-type peptidase activity | 2.81E-02 |
| 94 | GO:0030145: manganese ion binding | 3.23E-02 |
| 95 | GO:0050897: cobalt ion binding | 3.23E-02 |
| 96 | GO:0004497: monooxygenase activity | 3.50E-02 |
| 97 | GO:0003993: acid phosphatase activity | 3.56E-02 |
| 98 | GO:0000149: SNARE binding | 3.67E-02 |
| 99 | GO:0050661: NADP binding | 3.78E-02 |
| 100 | GO:0005507: copper ion binding | 3.80E-02 |
| 101 | GO:0004364: glutathione transferase activity | 4.01E-02 |
| 102 | GO:0004185: serine-type carboxypeptidase activity | 4.13E-02 |
| 103 | GO:0005484: SNAP receptor activity | 4.13E-02 |
| 104 | GO:0042803: protein homodimerization activity | 4.38E-02 |
| 105 | GO:0004871: signal transducer activity | 4.38E-02 |