Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G52565

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010324: membrane invagination0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
4GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
5GO:0015690: aluminum cation transport0.00E+00
6GO:1900367: positive regulation of defense response to insect0.00E+00
7GO:0002376: immune system process0.00E+00
8GO:0010200: response to chitin2.20E-14
9GO:0019725: cellular homeostasis2.91E-06
10GO:0009751: response to salicylic acid3.45E-05
11GO:0060548: negative regulation of cell death4.33E-05
12GO:0009266: response to temperature stimulus4.43E-05
13GO:0010225: response to UV-C6.89E-05
14GO:0045927: positive regulation of growth6.89E-05
15GO:0009759: indole glucosinolate biosynthetic process1.01E-04
16GO:0046777: protein autophosphorylation1.11E-04
17GO:0010150: leaf senescence1.60E-04
18GO:1900056: negative regulation of leaf senescence1.82E-04
19GO:0006470: protein dephosphorylation2.10E-04
20GO:0009617: response to bacterium2.28E-04
21GO:0051938: L-glutamate import2.51E-04
22GO:0010941: regulation of cell death2.51E-04
23GO:0009609: response to symbiotic bacterium2.51E-04
24GO:0010421: hydrogen peroxide-mediated programmed cell death2.51E-04
25GO:0019478: D-amino acid catabolic process2.51E-04
26GO:0006562: proline catabolic process2.51E-04
27GO:0007229: integrin-mediated signaling pathway2.51E-04
28GO:1901183: positive regulation of camalexin biosynthetic process2.51E-04
29GO:0009270: response to humidity2.51E-04
30GO:0050691: regulation of defense response to virus by host2.51E-04
31GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.10E-04
32GO:0009737: response to abscisic acid5.06E-04
33GO:0043091: L-arginine import5.53E-04
34GO:0006597: spermine biosynthetic process5.53E-04
35GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.53E-04
36GO:0010133: proline catabolic process to glutamate5.53E-04
37GO:0015802: basic amino acid transport5.53E-04
38GO:0010618: aerenchyma formation5.53E-04
39GO:0008361: regulation of cell size6.33E-04
40GO:0007034: vacuolar transport8.08E-04
41GO:0042742: defense response to bacterium8.97E-04
42GO:0045793: positive regulation of cell size8.99E-04
43GO:0010186: positive regulation of cellular defense response8.99E-04
44GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process8.99E-04
45GO:0009653: anatomical structure morphogenesis8.99E-04
46GO:0009062: fatty acid catabolic process8.99E-04
47GO:1900140: regulation of seedling development8.99E-04
48GO:0006979: response to oxidative stress9.11E-04
49GO:0051707: response to other organism1.16E-03
50GO:0080024: indolebutyric acid metabolic process1.28E-03
51GO:0034219: carbohydrate transmembrane transport1.28E-03
52GO:0070301: cellular response to hydrogen peroxide1.28E-03
53GO:0043207: response to external biotic stimulus1.28E-03
54GO:0072583: clathrin-dependent endocytosis1.28E-03
55GO:0006537: glutamate biosynthetic process1.28E-03
56GO:0015696: ammonium transport1.28E-03
57GO:0071786: endoplasmic reticulum tubular network organization1.28E-03
58GO:0051289: protein homotetramerization1.28E-03
59GO:0031348: negative regulation of defense response1.46E-03
60GO:0071456: cellular response to hypoxia1.46E-03
61GO:0009625: response to insect1.59E-03
62GO:0080142: regulation of salicylic acid biosynthetic process1.71E-03
63GO:1901141: regulation of lignin biosynthetic process1.71E-03
64GO:0046345: abscisic acid catabolic process1.71E-03
65GO:0010483: pollen tube reception1.71E-03
66GO:0009652: thigmotropism1.71E-03
67GO:0045088: regulation of innate immune response1.71E-03
68GO:1902584: positive regulation of response to water deprivation1.71E-03
69GO:0072488: ammonium transmembrane transport1.71E-03
70GO:0006621: protein retention in ER lumen1.71E-03
71GO:1901002: positive regulation of response to salt stress1.71E-03
72GO:0015867: ATP transport1.71E-03
73GO:0010188: response to microbial phytotoxin1.71E-03
74GO:0006662: glycerol ether metabolic process2.18E-03
75GO:0009626: plant-type hypersensitive response2.27E-03
76GO:0009646: response to absence of light2.34E-03
77GO:0006635: fatty acid beta-oxidation2.68E-03
78GO:0010193: response to ozone2.68E-03
79GO:0010942: positive regulation of cell death2.70E-03
80GO:0015866: ADP transport2.70E-03
81GO:0006596: polyamine biosynthetic process2.70E-03
82GO:0009414: response to water deprivation2.94E-03
83GO:0009611: response to wounding3.11E-03
84GO:0010310: regulation of hydrogen peroxide metabolic process3.24E-03
85GO:0034389: lipid particle organization3.24E-03
86GO:0042372: phylloquinone biosynthetic process3.24E-03
87GO:0045926: negative regulation of growth3.24E-03
88GO:0009612: response to mechanical stimulus3.24E-03
89GO:0045892: negative regulation of transcription, DNA-templated3.55E-03
90GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.82E-03
91GO:0006401: RNA catabolic process3.82E-03
92GO:0009610: response to symbiotic fungus3.82E-03
93GO:0043090: amino acid import3.82E-03
94GO:0080186: developmental vegetative growth3.82E-03
95GO:0001666: response to hypoxia3.87E-03
96GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.09E-03
97GO:0035265: organ growth4.44E-03
98GO:0009787: regulation of abscisic acid-activated signaling pathway4.44E-03
99GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.44E-03
100GO:0009651: response to salt stress4.58E-03
101GO:0030968: endoplasmic reticulum unfolded protein response5.08E-03
102GO:0006972: hyperosmotic response5.08E-03
103GO:2000031: regulation of salicylic acid mediated signaling pathway5.08E-03
104GO:0010099: regulation of photomorphogenesis5.08E-03
105GO:0010120: camalexin biosynthetic process5.08E-03
106GO:0009753: response to jasmonic acid5.30E-03
107GO:0009835: fruit ripening5.75E-03
108GO:0090305: nucleic acid phosphodiester bond hydrolysis5.75E-03
109GO:1900426: positive regulation of defense response to bacterium6.46E-03
110GO:0034599: cellular response to oxidative stress6.68E-03
111GO:0009873: ethylene-activated signaling pathway7.03E-03
112GO:0009682: induced systemic resistance7.96E-03
113GO:0052544: defense response by callose deposition in cell wall7.96E-03
114GO:0012501: programmed cell death8.75E-03
115GO:0002213: defense response to insect8.75E-03
116GO:0015706: nitrate transport8.75E-03
117GO:0010105: negative regulation of ethylene-activated signaling pathway8.75E-03
118GO:0009636: response to toxic substance9.26E-03
119GO:0050832: defense response to fungus9.53E-03
120GO:0006351: transcription, DNA-templated9.53E-03
121GO:0055046: microgametogenesis9.57E-03
122GO:0031347: regulation of defense response9.99E-03
123GO:0002237: response to molecule of bacterial origin1.04E-02
124GO:0009738: abscisic acid-activated signaling pathway1.08E-02
125GO:0090351: seedling development1.13E-02
126GO:0046854: phosphatidylinositol phosphorylation1.13E-02
127GO:0010167: response to nitrate1.13E-02
128GO:0000162: tryptophan biosynthetic process1.22E-02
129GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.27E-02
130GO:0005992: trehalose biosynthetic process1.31E-02
131GO:0080147: root hair cell development1.31E-02
132GO:0006468: protein phosphorylation1.36E-02
133GO:0009620: response to fungus1.45E-02
134GO:0019915: lipid storage1.50E-02
135GO:0003333: amino acid transmembrane transport1.50E-02
136GO:0035428: hexose transmembrane transport1.60E-02
137GO:0016226: iron-sulfur cluster assembly1.60E-02
138GO:2000022: regulation of jasmonic acid mediated signaling pathway1.60E-02
139GO:0018105: peptidyl-serine phosphorylation1.64E-02
140GO:0009742: brassinosteroid mediated signaling pathway1.68E-02
141GO:0009693: ethylene biosynthetic process1.71E-02
142GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.92E-02
143GO:0070417: cellular response to cold1.92E-02
144GO:0009408: response to heat1.99E-02
145GO:0010118: stomatal movement2.02E-02
146GO:0046323: glucose import2.14E-02
147GO:0009741: response to brassinosteroid2.14E-02
148GO:0009845: seed germination2.15E-02
149GO:0008654: phospholipid biosynthetic process2.36E-02
150GO:0071554: cell wall organization or biogenesis2.48E-02
151GO:0016032: viral process2.60E-02
152GO:0019760: glucosinolate metabolic process2.85E-02
153GO:0006904: vesicle docking involved in exocytosis2.97E-02
154GO:0051607: defense response to virus3.10E-02
155GO:0009911: positive regulation of flower development3.23E-02
156GO:0007275: multicellular organism development3.24E-02
157GO:0010029: regulation of seed germination3.36E-02
158GO:0009816: defense response to bacterium, incompatible interaction3.36E-02
159GO:0009627: systemic acquired resistance3.49E-02
160GO:0042128: nitrate assimilation3.49E-02
161GO:0048573: photoperiodism, flowering3.62E-02
162GO:0016049: cell growth3.76E-02
163GO:0008219: cell death3.90E-02
164GO:0009407: toxin catabolic process4.18E-02
165GO:0010043: response to zinc ion4.32E-02
166GO:0010119: regulation of stomatal movement4.32E-02
167GO:0035556: intracellular signal transduction4.35E-02
168GO:0006865: amino acid transport4.46E-02
169GO:0006970: response to osmotic stress4.56E-02
170GO:0009723: response to ethylene4.89E-02
RankGO TermAdjusted P value
1GO:0051499: D-aminoacyl-tRNA deacylase activity0.00E+00
2GO:0004168: dolichol kinase activity0.00E+00
3GO:0005046: KDEL sequence binding0.00E+00
4GO:0043565: sequence-specific DNA binding2.44E-04
5GO:0090353: polygalacturonase inhibitor activity2.51E-04
6GO:0010179: IAA-Ala conjugate hydrolase activity2.51E-04
7GO:0032050: clathrin heavy chain binding2.51E-04
8GO:0008809: carnitine racemase activity2.51E-04
9GO:2001227: quercitrin binding2.51E-04
10GO:0004425: indole-3-glycerol-phosphate synthase activity2.51E-04
11GO:0004657: proline dehydrogenase activity2.51E-04
12GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity2.51E-04
13GO:0016768: spermine synthase activity2.51E-04
14GO:2001147: camalexin binding2.51E-04
15GO:0004766: spermidine synthase activity5.53E-04
16GO:0005509: calcium ion binding7.51E-04
17GO:0004722: protein serine/threonine phosphatase activity8.93E-04
18GO:0043424: protein histidine kinase binding1.22E-03
19GO:0004165: dodecenoyl-CoA delta-isomerase activity1.28E-03
20GO:0015189: L-lysine transmembrane transporter activity1.28E-03
21GO:0015181: arginine transmembrane transporter activity1.28E-03
22GO:0016656: monodehydroascorbate reductase (NADH) activity1.28E-03
23GO:0046923: ER retention sequence binding1.71E-03
24GO:0005313: L-glutamate transmembrane transporter activity1.71E-03
25GO:0047134: protein-disulfide reductase activity1.87E-03
26GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.19E-03
27GO:0010294: abscisic acid glucosyltransferase activity2.19E-03
28GO:0004791: thioredoxin-disulfide reductase activity2.34E-03
29GO:0008519: ammonium transmembrane transporter activity2.70E-03
30GO:0004605: phosphatidate cytidylyltransferase activity2.70E-03
31GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.05E-03
32GO:0004656: procollagen-proline 4-dioxygenase activity3.24E-03
33GO:0015217: ADP transmembrane transporter activity3.24E-03
34GO:0005347: ATP transmembrane transporter activity3.24E-03
35GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.44E-03
36GO:0043295: glutathione binding3.82E-03
37GO:0009931: calcium-dependent protein serine/threonine kinase activity4.32E-03
38GO:0004714: transmembrane receptor protein tyrosine kinase activity4.44E-03
39GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity4.44E-03
40GO:0005544: calcium-dependent phospholipid binding4.44E-03
41GO:0004683: calmodulin-dependent protein kinase activity4.55E-03
42GO:0004806: triglyceride lipase activity4.55E-03
43GO:0016301: kinase activity4.67E-03
44GO:0005515: protein binding4.73E-03
45GO:0004430: 1-phosphatidylinositol 4-kinase activity5.08E-03
46GO:0047617: acyl-CoA hydrolase activity6.46E-03
47GO:0015112: nitrate transmembrane transporter activity6.46E-03
48GO:0015174: basic amino acid transmembrane transporter activity6.46E-03
49GO:0004672: protein kinase activity6.55E-03
50GO:0004712: protein serine/threonine/tyrosine kinase activity6.98E-03
51GO:0004805: trehalose-phosphatase activity7.20E-03
52GO:0005543: phospholipid binding7.96E-03
53GO:0044212: transcription regulatory region DNA binding1.03E-02
54GO:0051119: sugar transmembrane transporter activity1.13E-02
55GO:0015171: amino acid transmembrane transporter activity1.23E-02
56GO:0008234: cysteine-type peptidase activity1.23E-02
57GO:0031418: L-ascorbic acid binding1.31E-02
58GO:0033612: receptor serine/threonine kinase binding1.50E-02
59GO:0003700: transcription factor activity, sequence-specific DNA binding1.60E-02
60GO:0015035: protein disulfide oxidoreductase activity1.64E-02
61GO:0005355: glucose transmembrane transporter activity2.25E-02
62GO:0019901: protein kinase binding2.36E-02
63GO:0004872: receptor activity2.36E-02
64GO:0004197: cysteine-type endopeptidase activity2.60E-02
65GO:0004518: nuclease activity2.60E-02
66GO:0004674: protein serine/threonine kinase activity2.74E-02
67GO:0008237: metallopeptidase activity2.97E-02
68GO:0016413: O-acetyltransferase activity3.10E-02
69GO:0042802: identical protein binding3.49E-02
70GO:0004721: phosphoprotein phosphatase activity3.62E-02
71GO:0046982: protein heterodimerization activity4.16E-02
72GO:0050897: cobalt ion binding4.32E-02
73GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.61E-02
74GO:0003746: translation elongation factor activity4.61E-02
75GO:0000987: core promoter proximal region sequence-specific DNA binding4.76E-02
76GO:0046872: metal ion binding4.84E-02
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Gene type



Gene DE type