GO Enrichment Analysis of Co-expressed Genes with
AT1G51560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 2 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 3 | GO:0071951: conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | 0.00E+00 |
| 4 | GO:0080127: fruit septum development | 0.00E+00 |
| 5 | GO:0042255: ribosome assembly | 2.73E-05 |
| 6 | GO:0006353: DNA-templated transcription, termination | 2.73E-05 |
| 7 | GO:0006999: nuclear pore organization | 6.26E-05 |
| 8 | GO:0036228: protein targeting to nuclear inner membrane | 6.26E-05 |
| 9 | GO:0033206: meiotic cytokinesis | 6.26E-05 |
| 10 | GO:0010424: DNA methylation on cytosine within a CG sequence | 1.52E-04 |
| 11 | GO:0090309: positive regulation of methylation-dependent chromatin silencing | 1.52E-04 |
| 12 | GO:2000071: regulation of defense response by callose deposition | 1.52E-04 |
| 13 | GO:0032776: DNA methylation on cytosine | 2.57E-04 |
| 14 | GO:0009152: purine ribonucleotide biosynthetic process | 3.73E-04 |
| 15 | GO:1901332: negative regulation of lateral root development | 3.73E-04 |
| 16 | GO:0006808: regulation of nitrogen utilization | 4.99E-04 |
| 17 | GO:0016131: brassinosteroid metabolic process | 6.32E-04 |
| 18 | GO:0042793: transcription from plastid promoter | 7.73E-04 |
| 19 | GO:0003006: developmental process involved in reproduction | 7.73E-04 |
| 20 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 9.20E-04 |
| 21 | GO:2000033: regulation of seed dormancy process | 9.20E-04 |
| 22 | GO:0009867: jasmonic acid mediated signaling pathway | 9.88E-04 |
| 23 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 1.07E-03 |
| 24 | GO:0010374: stomatal complex development | 1.07E-03 |
| 25 | GO:0030001: metal ion transport | 1.12E-03 |
| 26 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.24E-03 |
| 27 | GO:0046620: regulation of organ growth | 1.24E-03 |
| 28 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 1.24E-03 |
| 29 | GO:0007186: G-protein coupled receptor signaling pathway | 1.41E-03 |
| 30 | GO:0010233: phloem transport | 1.41E-03 |
| 31 | GO:0010052: guard cell differentiation | 1.41E-03 |
| 32 | GO:0006607: NLS-bearing protein import into nucleus | 1.58E-03 |
| 33 | GO:0048507: meristem development | 1.58E-03 |
| 34 | GO:0032259: methylation | 1.67E-03 |
| 35 | GO:0048367: shoot system development | 2.04E-03 |
| 36 | GO:0010216: maintenance of DNA methylation | 2.17E-03 |
| 37 | GO:0009682: induced systemic resistance | 2.17E-03 |
| 38 | GO:0010582: floral meristem determinacy | 2.37E-03 |
| 39 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 2.37E-03 |
| 40 | GO:0046274: lignin catabolic process | 2.58E-03 |
| 41 | GO:0010588: cotyledon vascular tissue pattern formation | 2.58E-03 |
| 42 | GO:0010540: basipetal auxin transport | 2.80E-03 |
| 43 | GO:0048467: gynoecium development | 2.80E-03 |
| 44 | GO:0006270: DNA replication initiation | 2.80E-03 |
| 45 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.49E-03 |
| 46 | GO:0009863: salicylic acid mediated signaling pathway | 3.49E-03 |
| 47 | GO:0010187: negative regulation of seed germination | 3.49E-03 |
| 48 | GO:0009416: response to light stimulus | 3.63E-03 |
| 49 | GO:0006825: copper ion transport | 3.74E-03 |
| 50 | GO:0006874: cellular calcium ion homeostasis | 3.74E-03 |
| 51 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.24E-03 |
| 52 | GO:0008380: RNA splicing | 4.84E-03 |
| 53 | GO:0051028: mRNA transport | 5.03E-03 |
| 54 | GO:0010087: phloem or xylem histogenesis | 5.31E-03 |
| 55 | GO:0010118: stomatal movement | 5.31E-03 |
| 56 | GO:0048653: anther development | 5.31E-03 |
| 57 | GO:0080022: primary root development | 5.31E-03 |
| 58 | GO:0008033: tRNA processing | 5.31E-03 |
| 59 | GO:0009741: response to brassinosteroid | 5.59E-03 |
| 60 | GO:0010268: brassinosteroid homeostasis | 5.59E-03 |
| 61 | GO:0010305: leaf vascular tissue pattern formation | 5.59E-03 |
| 62 | GO:0009658: chloroplast organization | 6.27E-03 |
| 63 | GO:0080156: mitochondrial mRNA modification | 6.46E-03 |
| 64 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 6.46E-03 |
| 65 | GO:0002229: defense response to oomycetes | 6.46E-03 |
| 66 | GO:0032502: developmental process | 6.76E-03 |
| 67 | GO:0010252: auxin homeostasis | 7.38E-03 |
| 68 | GO:0010029: regulation of seed germination | 8.68E-03 |
| 69 | GO:0009733: response to auxin | 1.03E-02 |
| 70 | GO:0048767: root hair elongation | 1.04E-02 |
| 71 | GO:0006811: ion transport | 1.08E-02 |
| 72 | GO:0010218: response to far red light | 1.08E-02 |
| 73 | GO:0009926: auxin polar transport | 1.42E-02 |
| 74 | GO:0031347: regulation of defense response | 1.63E-02 |
| 75 | GO:0006260: DNA replication | 1.63E-02 |
| 76 | GO:0009846: pollen germination | 1.67E-02 |
| 77 | GO:0042538: hyperosmotic salinity response | 1.67E-02 |
| 78 | GO:0006364: rRNA processing | 1.75E-02 |
| 79 | GO:0006417: regulation of translation | 1.89E-02 |
| 80 | GO:0009620: response to fungus | 2.11E-02 |
| 81 | GO:0016569: covalent chromatin modification | 2.16E-02 |
| 82 | GO:0009740: gibberellic acid mediated signaling pathway | 2.16E-02 |
| 83 | GO:0051726: regulation of cell cycle | 2.35E-02 |
| 84 | GO:0009058: biosynthetic process | 2.75E-02 |
| 85 | GO:0009845: seed germination | 2.80E-02 |
| 86 | GO:0009790: embryo development | 2.95E-02 |
| 87 | GO:0006633: fatty acid biosynthetic process | 3.11E-02 |
| 88 | GO:0040008: regulation of growth | 3.22E-02 |
| 89 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.44E-02 |
| 90 | GO:0009739: response to gibberellin | 3.60E-02 |
| 91 | GO:0016567: protein ubiquitination | 3.61E-02 |
| 92 | GO:0007049: cell cycle | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 2 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 3 | GO:0004479: methionyl-tRNA formyltransferase activity | 0.00E+00 |
| 4 | GO:0004016: adenylate cyclase activity | 6.26E-05 |
| 5 | GO:0008395: steroid hydroxylase activity | 6.26E-05 |
| 6 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 1.52E-04 |
| 7 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.57E-04 |
| 8 | GO:0010429: methyl-CpNpN binding | 2.57E-04 |
| 9 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.57E-04 |
| 10 | GO:0010428: methyl-CpNpG binding | 2.57E-04 |
| 11 | GO:0003727: single-stranded RNA binding | 2.73E-04 |
| 12 | GO:0004930: G-protein coupled receptor activity | 4.99E-04 |
| 13 | GO:0003688: DNA replication origin binding | 7.73E-04 |
| 14 | GO:0008168: methyltransferase activity | 7.96E-04 |
| 15 | GO:0017056: structural constituent of nuclear pore | 1.24E-03 |
| 16 | GO:0000989: transcription factor activity, transcription factor binding | 1.58E-03 |
| 17 | GO:0003690: double-stranded DNA binding | 1.73E-03 |
| 18 | GO:0009672: auxin:proton symporter activity | 1.77E-03 |
| 19 | GO:0005487: nucleocytoplasmic transporter activity | 1.77E-03 |
| 20 | GO:0008327: methyl-CpG binding | 2.17E-03 |
| 21 | GO:0052716: hydroquinone:oxygen oxidoreductase activity | 2.37E-03 |
| 22 | GO:0010329: auxin efflux transmembrane transporter activity | 2.58E-03 |
| 23 | GO:0019843: rRNA binding | 2.96E-03 |
| 24 | GO:0005217: intracellular ligand-gated ion channel activity | 3.03E-03 |
| 25 | GO:0004970: ionotropic glutamate receptor activity | 3.03E-03 |
| 26 | GO:0019901: protein kinase binding | 6.17E-03 |
| 27 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 7.70E-03 |
| 28 | GO:0005200: structural constituent of cytoskeleton | 7.70E-03 |
| 29 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 9.70E-03 |
| 30 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.08E-02 |
| 31 | GO:0003993: acid phosphatase activity | 1.23E-02 |
| 32 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.26E-02 |
| 33 | GO:0043621: protein self-association | 1.50E-02 |
| 34 | GO:0043565: sequence-specific DNA binding | 2.12E-02 |
| 35 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.70E-02 |
| 36 | GO:0005507: copper ion binding | 2.91E-02 |
| 37 | GO:0004601: peroxidase activity | 4.54E-02 |
| 38 | GO:0043531: ADP binding | 4.84E-02 |