GO Enrichment Analysis of Co-expressed Genes with
AT1G49430
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 3 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 4 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 5 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 6 | GO:0015670: carbon dioxide transport | 0.00E+00 |
| 7 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 8 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 9 | GO:0010207: photosystem II assembly | 3.59E-07 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 6.47E-07 |
| 11 | GO:0055114: oxidation-reduction process | 8.55E-06 |
| 12 | GO:0006094: gluconeogenesis | 1.69E-05 |
| 13 | GO:0042549: photosystem II stabilization | 5.89E-05 |
| 14 | GO:0016559: peroxisome fission | 1.40E-04 |
| 15 | GO:0006096: glycolytic process | 1.43E-04 |
| 16 | GO:0010362: negative regulation of anion channel activity by blue light | 1.80E-04 |
| 17 | GO:0015969: guanosine tetraphosphate metabolic process | 1.80E-04 |
| 18 | GO:0031426: polycistronic mRNA processing | 1.80E-04 |
| 19 | GO:0043489: RNA stabilization | 1.80E-04 |
| 20 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.80E-04 |
| 21 | GO:0010426: DNA methylation on cytosine within a CHH sequence | 1.80E-04 |
| 22 | GO:0000481: maturation of 5S rRNA | 1.80E-04 |
| 23 | GO:0015801: aromatic amino acid transport | 1.80E-04 |
| 24 | GO:1904964: positive regulation of phytol biosynthetic process | 1.80E-04 |
| 25 | GO:0043087: regulation of GTPase activity | 1.80E-04 |
| 26 | GO:0071461: cellular response to redox state | 1.80E-04 |
| 27 | GO:0046167: glycerol-3-phosphate biosynthetic process | 1.80E-04 |
| 28 | GO:0043007: maintenance of rDNA | 1.80E-04 |
| 29 | GO:1902458: positive regulation of stomatal opening | 1.80E-04 |
| 30 | GO:0034337: RNA folding | 1.80E-04 |
| 31 | GO:0006098: pentose-phosphate shunt | 2.13E-04 |
| 32 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.00E-04 |
| 33 | GO:0035304: regulation of protein dephosphorylation | 4.05E-04 |
| 34 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 4.05E-04 |
| 35 | GO:0080005: photosystem stoichiometry adjustment | 4.05E-04 |
| 36 | GO:0010541: acropetal auxin transport | 4.05E-04 |
| 37 | GO:0006650: glycerophospholipid metabolic process | 4.05E-04 |
| 38 | GO:0010155: regulation of proton transport | 4.05E-04 |
| 39 | GO:0006729: tetrahydrobiopterin biosynthetic process | 4.05E-04 |
| 40 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 4.05E-04 |
| 41 | GO:0015790: UDP-xylose transport | 4.05E-04 |
| 42 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.05E-04 |
| 43 | GO:0009637: response to blue light | 4.69E-04 |
| 44 | GO:0010143: cutin biosynthetic process | 5.13E-04 |
| 45 | GO:0019253: reductive pentose-phosphate cycle | 5.13E-04 |
| 46 | GO:0006631: fatty acid metabolic process | 5.83E-04 |
| 47 | GO:0006833: water transport | 6.38E-04 |
| 48 | GO:0006000: fructose metabolic process | 6.61E-04 |
| 49 | GO:0046168: glycerol-3-phosphate catabolic process | 6.61E-04 |
| 50 | GO:0010160: formation of animal organ boundary | 6.61E-04 |
| 51 | GO:0044375: regulation of peroxisome size | 6.61E-04 |
| 52 | GO:0046621: negative regulation of organ growth | 6.61E-04 |
| 53 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 9.45E-04 |
| 54 | GO:0006072: glycerol-3-phosphate metabolic process | 9.45E-04 |
| 55 | GO:2001141: regulation of RNA biosynthetic process | 9.45E-04 |
| 56 | GO:0010371: regulation of gibberellin biosynthetic process | 9.45E-04 |
| 57 | GO:0010239: chloroplast mRNA processing | 9.45E-04 |
| 58 | GO:2000306: positive regulation of photomorphogenesis | 1.25E-03 |
| 59 | GO:0006546: glycine catabolic process | 1.25E-03 |
| 60 | GO:0006021: inositol biosynthetic process | 1.25E-03 |
| 61 | GO:0032366: intracellular sterol transport | 1.25E-03 |
| 62 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.25E-03 |
| 63 | GO:0034220: ion transmembrane transport | 1.27E-03 |
| 64 | GO:0044550: secondary metabolite biosynthetic process | 1.45E-03 |
| 65 | GO:0009904: chloroplast accumulation movement | 1.59E-03 |
| 66 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.59E-03 |
| 67 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.96E-03 |
| 68 | GO:0045962: positive regulation of development, heterochronic | 1.96E-03 |
| 69 | GO:0060918: auxin transport | 1.96E-03 |
| 70 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.96E-03 |
| 71 | GO:0009228: thiamine biosynthetic process | 1.96E-03 |
| 72 | GO:0046855: inositol phosphate dephosphorylation | 1.96E-03 |
| 73 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.96E-03 |
| 74 | GO:0000054: ribosomal subunit export from nucleus | 2.35E-03 |
| 75 | GO:0009903: chloroplast avoidance movement | 2.35E-03 |
| 76 | GO:0048437: floral organ development | 2.77E-03 |
| 77 | GO:0006400: tRNA modification | 2.77E-03 |
| 78 | GO:0009395: phospholipid catabolic process | 2.77E-03 |
| 79 | GO:0018298: protein-chromophore linkage | 3.15E-03 |
| 80 | GO:0032508: DNA duplex unwinding | 3.21E-03 |
| 81 | GO:2000070: regulation of response to water deprivation | 3.21E-03 |
| 82 | GO:0007155: cell adhesion | 3.21E-03 |
| 83 | GO:0048564: photosystem I assembly | 3.21E-03 |
| 84 | GO:0006811: ion transport | 3.47E-03 |
| 85 | GO:0007186: G-protein coupled receptor signaling pathway | 3.67E-03 |
| 86 | GO:0009657: plastid organization | 3.67E-03 |
| 87 | GO:0009932: cell tip growth | 3.67E-03 |
| 88 | GO:0006002: fructose 6-phosphate metabolic process | 3.67E-03 |
| 89 | GO:0071482: cellular response to light stimulus | 3.67E-03 |
| 90 | GO:0015996: chlorophyll catabolic process | 3.67E-03 |
| 91 | GO:0051865: protein autoubiquitination | 4.15E-03 |
| 92 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 4.15E-03 |
| 93 | GO:0048507: meristem development | 4.15E-03 |
| 94 | GO:0010205: photoinhibition | 4.65E-03 |
| 95 | GO:0009638: phototropism | 4.65E-03 |
| 96 | GO:0009640: photomorphogenesis | 5.12E-03 |
| 97 | GO:0009744: response to sucrose | 5.12E-03 |
| 98 | GO:0043069: negative regulation of programmed cell death | 5.18E-03 |
| 99 | GO:0009641: shade avoidance | 5.18E-03 |
| 100 | GO:0010215: cellulose microfibril organization | 5.18E-03 |
| 101 | GO:0009416: response to light stimulus | 5.52E-03 |
| 102 | GO:0019684: photosynthesis, light reaction | 5.72E-03 |
| 103 | GO:0008285: negative regulation of cell proliferation | 5.72E-03 |
| 104 | GO:0006352: DNA-templated transcription, initiation | 5.72E-03 |
| 105 | GO:0006415: translational termination | 5.72E-03 |
| 106 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.72E-03 |
| 107 | GO:0045037: protein import into chloroplast stroma | 6.28E-03 |
| 108 | GO:0008361: regulation of cell size | 6.28E-03 |
| 109 | GO:0006790: sulfur compound metabolic process | 6.28E-03 |
| 110 | GO:0030048: actin filament-based movement | 6.86E-03 |
| 111 | GO:0009785: blue light signaling pathway | 6.86E-03 |
| 112 | GO:0006006: glucose metabolic process | 6.86E-03 |
| 113 | GO:0009718: anthocyanin-containing compound biosynthetic process | 6.86E-03 |
| 114 | GO:0009725: response to hormone | 6.86E-03 |
| 115 | GO:0009767: photosynthetic electron transport chain | 6.86E-03 |
| 116 | GO:0005986: sucrose biosynthetic process | 6.86E-03 |
| 117 | GO:0034605: cellular response to heat | 7.46E-03 |
| 118 | GO:0010020: chloroplast fission | 7.46E-03 |
| 119 | GO:0010223: secondary shoot formation | 7.46E-03 |
| 120 | GO:0010540: basipetal auxin transport | 7.46E-03 |
| 121 | GO:0009266: response to temperature stimulus | 7.46E-03 |
| 122 | GO:0015979: photosynthesis | 7.85E-03 |
| 123 | GO:0055085: transmembrane transport | 7.92E-03 |
| 124 | GO:0042343: indole glucosinolate metabolic process | 8.08E-03 |
| 125 | GO:0009825: multidimensional cell growth | 8.08E-03 |
| 126 | GO:0019853: L-ascorbic acid biosynthetic process | 8.08E-03 |
| 127 | GO:0046854: phosphatidylinositol phosphorylation | 8.08E-03 |
| 128 | GO:0007031: peroxisome organization | 8.08E-03 |
| 129 | GO:0006810: transport | 8.71E-03 |
| 130 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.71E-03 |
| 131 | GO:0046686: response to cadmium ion | 9.65E-03 |
| 132 | GO:0010073: meristem maintenance | 1.00E-02 |
| 133 | GO:0006396: RNA processing | 1.01E-02 |
| 134 | GO:0006306: DNA methylation | 1.07E-02 |
| 135 | GO:0016114: terpenoid biosynthetic process | 1.07E-02 |
| 136 | GO:0003333: amino acid transmembrane transport | 1.07E-02 |
| 137 | GO:0098542: defense response to other organism | 1.07E-02 |
| 138 | GO:0010431: seed maturation | 1.07E-02 |
| 139 | GO:0016226: iron-sulfur cluster assembly | 1.14E-02 |
| 140 | GO:0010227: floral organ abscission | 1.22E-02 |
| 141 | GO:0048443: stamen development | 1.29E-02 |
| 142 | GO:0006817: phosphate ion transport | 1.29E-02 |
| 143 | GO:0019722: calcium-mediated signaling | 1.29E-02 |
| 144 | GO:0009306: protein secretion | 1.29E-02 |
| 145 | GO:0009958: positive gravitropism | 1.52E-02 |
| 146 | GO:0045489: pectin biosynthetic process | 1.52E-02 |
| 147 | GO:0006520: cellular amino acid metabolic process | 1.52E-02 |
| 148 | GO:0010182: sugar mediated signaling pathway | 1.52E-02 |
| 149 | GO:0009741: response to brassinosteroid | 1.52E-02 |
| 150 | GO:0006633: fatty acid biosynthetic process | 1.55E-02 |
| 151 | GO:0007018: microtubule-based movement | 1.60E-02 |
| 152 | GO:0009791: post-embryonic development | 1.68E-02 |
| 153 | GO:0019252: starch biosynthetic process | 1.68E-02 |
| 154 | GO:0008654: phospholipid biosynthetic process | 1.68E-02 |
| 155 | GO:0007623: circadian rhythm | 1.71E-02 |
| 156 | GO:0007264: small GTPase mediated signal transduction | 1.85E-02 |
| 157 | GO:0009639: response to red or far red light | 2.03E-02 |
| 158 | GO:0007267: cell-cell signaling | 2.11E-02 |
| 159 | GO:0010027: thylakoid membrane organization | 2.30E-02 |
| 160 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.39E-02 |
| 161 | GO:0042128: nitrate assimilation | 2.48E-02 |
| 162 | GO:0009409: response to cold | 2.51E-02 |
| 163 | GO:0009658: chloroplast organization | 2.64E-02 |
| 164 | GO:0016311: dephosphorylation | 2.68E-02 |
| 165 | GO:0009813: flavonoid biosynthetic process | 2.87E-02 |
| 166 | GO:0000160: phosphorelay signal transduction system | 2.87E-02 |
| 167 | GO:0009407: toxin catabolic process | 2.97E-02 |
| 168 | GO:0010218: response to far red light | 2.97E-02 |
| 169 | GO:0005975: carbohydrate metabolic process | 2.97E-02 |
| 170 | GO:0048527: lateral root development | 3.08E-02 |
| 171 | GO:0010119: regulation of stomatal movement | 3.08E-02 |
| 172 | GO:0009631: cold acclimation | 3.08E-02 |
| 173 | GO:0007568: aging | 3.08E-02 |
| 174 | GO:0006865: amino acid transport | 3.18E-02 |
| 175 | GO:0045087: innate immune response | 3.28E-02 |
| 176 | GO:0016051: carbohydrate biosynthetic process | 3.28E-02 |
| 177 | GO:0010114: response to red light | 3.93E-02 |
| 178 | GO:0009926: auxin polar transport | 3.93E-02 |
| 179 | GO:0042546: cell wall biogenesis | 4.04E-02 |
| 180 | GO:0008643: carbohydrate transport | 4.16E-02 |
| 181 | GO:0009636: response to toxic substance | 4.27E-02 |
| 182 | GO:0009965: leaf morphogenesis | 4.27E-02 |
| 183 | GO:0016042: lipid catabolic process | 4.68E-02 |
| 184 | GO:0006629: lipid metabolic process | 4.81E-02 |
| 185 | GO:0006364: rRNA processing | 4.86E-02 |
| 186 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 5 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 6 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 7 | GO:0016491: oxidoreductase activity | 3.47E-06 |
| 8 | GO:0000293: ferric-chelate reductase activity | 5.89E-05 |
| 9 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 5.89E-05 |
| 10 | GO:0004332: fructose-bisphosphate aldolase activity | 5.89E-05 |
| 11 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.80E-04 |
| 12 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.80E-04 |
| 13 | GO:0010242: oxygen evolving activity | 1.80E-04 |
| 14 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.80E-04 |
| 15 | GO:0004328: formamidase activity | 1.80E-04 |
| 16 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.80E-04 |
| 17 | GO:0005506: iron ion binding | 2.91E-04 |
| 18 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.05E-04 |
| 19 | GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity | 4.05E-04 |
| 20 | GO:0043024: ribosomal small subunit binding | 4.05E-04 |
| 21 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.05E-04 |
| 22 | GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity | 4.05E-04 |
| 23 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.05E-04 |
| 24 | GO:0005464: UDP-xylose transmembrane transporter activity | 4.05E-04 |
| 25 | GO:0008728: GTP diphosphokinase activity | 4.05E-04 |
| 26 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.05E-04 |
| 27 | GO:0048531: beta-1,3-galactosyltransferase activity | 4.05E-04 |
| 28 | GO:0042389: omega-3 fatty acid desaturase activity | 4.05E-04 |
| 29 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 4.05E-04 |
| 30 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.05E-04 |
| 31 | GO:0015173: aromatic amino acid transmembrane transporter activity | 4.05E-04 |
| 32 | GO:0004565: beta-galactosidase activity | 4.55E-04 |
| 33 | GO:0003993: acid phosphatase activity | 4.96E-04 |
| 34 | GO:0008266: poly(U) RNA binding | 5.13E-04 |
| 35 | GO:0050734: hydroxycinnamoyltransferase activity | 6.61E-04 |
| 36 | GO:0005504: fatty acid binding | 6.61E-04 |
| 37 | GO:0032947: protein complex scaffold | 6.61E-04 |
| 38 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 6.61E-04 |
| 39 | GO:0030267: glyoxylate reductase (NADP) activity | 6.61E-04 |
| 40 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.61E-04 |
| 41 | GO:0042802: identical protein binding | 6.89E-04 |
| 42 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 9.45E-04 |
| 43 | GO:0048027: mRNA 5'-UTR binding | 9.45E-04 |
| 44 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 9.45E-04 |
| 45 | GO:0016851: magnesium chelatase activity | 9.45E-04 |
| 46 | GO:0009882: blue light photoreceptor activity | 9.45E-04 |
| 47 | GO:0016788: hydrolase activity, acting on ester bonds | 9.52E-04 |
| 48 | GO:0016987: sigma factor activity | 1.25E-03 |
| 49 | GO:0045430: chalcone isomerase activity | 1.25E-03 |
| 50 | GO:0043495: protein anchor | 1.25E-03 |
| 51 | GO:0001053: plastid sigma factor activity | 1.25E-03 |
| 52 | GO:0005275: amine transmembrane transporter activity | 1.59E-03 |
| 53 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.88E-03 |
| 54 | GO:0042578: phosphoric ester hydrolase activity | 1.96E-03 |
| 55 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.96E-03 |
| 56 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.35E-03 |
| 57 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.35E-03 |
| 58 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 2.35E-03 |
| 59 | GO:0051920: peroxiredoxin activity | 2.35E-03 |
| 60 | GO:0015250: water channel activity | 2.42E-03 |
| 61 | GO:0003729: mRNA binding | 2.61E-03 |
| 62 | GO:0019899: enzyme binding | 2.77E-03 |
| 63 | GO:0016209: antioxidant activity | 3.21E-03 |
| 64 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.67E-03 |
| 65 | GO:0030955: potassium ion binding | 4.65E-03 |
| 66 | GO:0004743: pyruvate kinase activity | 4.65E-03 |
| 67 | GO:0035091: phosphatidylinositol binding | 5.54E-03 |
| 68 | GO:0005515: protein binding | 5.75E-03 |
| 69 | GO:0010329: auxin efflux transmembrane transporter activity | 6.86E-03 |
| 70 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.86E-03 |
| 71 | GO:0000155: phosphorelay sensor kinase activity | 6.86E-03 |
| 72 | GO:0003774: motor activity | 7.46E-03 |
| 73 | GO:0031624: ubiquitin conjugating enzyme binding | 7.46E-03 |
| 74 | GO:0008146: sulfotransferase activity | 8.08E-03 |
| 75 | GO:0051536: iron-sulfur cluster binding | 9.37E-03 |
| 76 | GO:0019825: oxygen binding | 9.42E-03 |
| 77 | GO:0022891: substrate-specific transmembrane transporter activity | 1.22E-02 |
| 78 | GO:0003727: single-stranded RNA binding | 1.29E-02 |
| 79 | GO:0010181: FMN binding | 1.60E-02 |
| 80 | GO:0004872: receptor activity | 1.68E-02 |
| 81 | GO:0048038: quinone binding | 1.77E-02 |
| 82 | GO:0008017: microtubule binding | 1.79E-02 |
| 83 | GO:0004518: nuclease activity | 1.85E-02 |
| 84 | GO:0016887: ATPase activity | 1.90E-02 |
| 85 | GO:0016791: phosphatase activity | 2.03E-02 |
| 86 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.11E-02 |
| 87 | GO:0016168: chlorophyll binding | 2.39E-02 |
| 88 | GO:0005096: GTPase activator activity | 2.87E-02 |
| 89 | GO:0020037: heme binding | 3.15E-02 |
| 90 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.60E-02 |
| 91 | GO:0052689: carboxylic ester hydrolase activity | 3.62E-02 |
| 92 | GO:0004364: glutathione transferase activity | 3.82E-02 |
| 93 | GO:0004185: serine-type carboxypeptidase activity | 3.93E-02 |
| 94 | GO:0004871: signal transducer activity | 4.10E-02 |
| 95 | GO:0043621: protein self-association | 4.16E-02 |
| 96 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.16E-02 |
| 97 | GO:0005525: GTP binding | 4.17E-02 |
| 98 | GO:0005198: structural molecule activity | 4.27E-02 |
| 99 | GO:0015293: symporter activity | 4.27E-02 |
| 100 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.39E-02 |
| 101 | GO:0051287: NAD binding | 4.50E-02 |
| 102 | GO:0003924: GTPase activity | 4.81E-02 |
| 103 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.86E-02 |
| 104 | GO:0005509: calcium ion binding | 4.87E-02 |
| 105 | GO:0003690: double-stranded DNA binding | 4.98E-02 |