Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G49010

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006114: glycerol biosynthetic process0.00E+00
2GO:0018023: peptidyl-lysine trimethylation0.00E+00
3GO:0071474: cellular hyperosmotic response0.00E+00
4GO:0070125: mitochondrial translational elongation0.00E+00
5GO:0006429: leucyl-tRNA aminoacylation0.00E+00
6GO:0009249: protein lipoylation0.00E+00
7GO:1905421: regulation of plant organ morphogenesis0.00E+00
8GO:0030155: regulation of cell adhesion0.00E+00
9GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
10GO:0017038: protein import0.00E+00
11GO:0046460: neutral lipid biosynthetic process0.00E+00
12GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
13GO:0090279: regulation of calcium ion import0.00E+00
14GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
15GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
16GO:0031116: positive regulation of microtubule polymerization0.00E+00
17GO:0042407: cristae formation0.00E+00
18GO:0042821: pyridoxal biosynthetic process0.00E+00
19GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
20GO:0042820: vitamin B6 catabolic process0.00E+00
21GO:0009106: lipoate metabolic process0.00E+00
22GO:0042817: pyridoxal metabolic process0.00E+00
23GO:0090042: tubulin deacetylation0.00E+00
24GO:0010027: thylakoid membrane organization1.66E-04
25GO:0045038: protein import into chloroplast thylakoid membrane1.76E-04
26GO:0032543: mitochondrial translation1.76E-04
27GO:0009658: chloroplast organization3.96E-04
28GO:0019478: D-amino acid catabolic process4.45E-04
29GO:0042547: cell wall modification involved in multidimensional cell growth4.45E-04
30GO:0042371: vitamin K biosynthetic process4.45E-04
31GO:1902458: positive regulation of stomatal opening4.45E-04
32GO:0006747: FAD biosynthetic process4.45E-04
33GO:0010729: positive regulation of hydrogen peroxide biosynthetic process4.45E-04
34GO:0006419: alanyl-tRNA aminoacylation4.45E-04
35GO:0000476: maturation of 4.5S rRNA4.45E-04
36GO:0009443: pyridoxal 5'-phosphate salvage4.45E-04
37GO:2000025: regulation of leaf formation4.45E-04
38GO:0000967: rRNA 5'-end processing4.45E-04
39GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process4.45E-04
40GO:0015671: oxygen transport4.45E-04
41GO:0006605: protein targeting5.41E-04
42GO:0071482: cellular response to light stimulus6.60E-04
43GO:0009657: plastid organization6.60E-04
44GO:0019432: triglyceride biosynthetic process7.90E-04
45GO:1900865: chloroplast RNA modification9.32E-04
46GO:0009220: pyrimidine ribonucleotide biosynthetic process9.61E-04
47GO:0001682: tRNA 5'-leader removal9.61E-04
48GO:1903426: regulation of reactive oxygen species biosynthetic process9.61E-04
49GO:0051262: protein tetramerization9.61E-04
50GO:0034470: ncRNA processing9.61E-04
51GO:0010198: synergid death9.61E-04
52GO:0006739: NADP metabolic process9.61E-04
53GO:1900871: chloroplast mRNA modification9.61E-04
54GO:0006432: phenylalanyl-tRNA aminoacylation9.61E-04
55GO:0018026: peptidyl-lysine monomethylation9.61E-04
56GO:0034755: iron ion transmembrane transport9.61E-04
57GO:0006423: cysteinyl-tRNA aminoacylation9.61E-04
58GO:0006435: threonyl-tRNA aminoacylation9.61E-04
59GO:0006782: protoporphyrinogen IX biosynthetic process1.08E-03
60GO:0006415: translational termination1.25E-03
61GO:0009627: systemic acquired resistance1.49E-03
62GO:0015940: pantothenate biosynthetic process1.57E-03
63GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.57E-03
64GO:0001578: microtubule bundle formation1.57E-03
65GO:0045493: xylan catabolic process1.57E-03
66GO:0005977: glycogen metabolic process1.57E-03
67GO:0033591: response to L-ascorbic acid1.57E-03
68GO:0048281: inflorescence morphogenesis1.57E-03
69GO:0006954: inflammatory response1.57E-03
70GO:0015995: chlorophyll biosynthetic process1.60E-03
71GO:2000012: regulation of auxin polar transport1.62E-03
72GO:0006508: proteolysis2.01E-03
73GO:0090351: seedling development2.05E-03
74GO:0016556: mRNA modification2.27E-03
75GO:0043572: plastid fission2.27E-03
76GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.27E-03
77GO:0009102: biotin biosynthetic process2.27E-03
78GO:0046653: tetrahydrofolate metabolic process2.27E-03
79GO:0010239: chloroplast mRNA processing2.27E-03
80GO:0009226: nucleotide-sugar biosynthetic process2.27E-03
81GO:0008615: pyridoxine biosynthetic process2.27E-03
82GO:0006424: glutamyl-tRNA aminoacylation2.27E-03
83GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.27E-03
84GO:0010148: transpiration2.27E-03
85GO:0009793: embryo development ending in seed dormancy2.28E-03
86GO:0006418: tRNA aminoacylation for protein translation2.80E-03
87GO:0010021: amylopectin biosynthetic process3.05E-03
88GO:0010109: regulation of photosynthesis3.05E-03
89GO:0051322: anaphase3.05E-03
90GO:0009765: photosynthesis, light harvesting3.05E-03
91GO:0022622: root system development3.05E-03
92GO:0007020: microtubule nucleation3.05E-03
93GO:0071483: cellular response to blue light3.05E-03
94GO:0006734: NADH metabolic process3.05E-03
95GO:0044205: 'de novo' UMP biosynthetic process3.05E-03
96GO:0006730: one-carbon metabolic process3.37E-03
97GO:0010236: plastoquinone biosynthetic process3.90E-03
98GO:0009107: lipoate biosynthetic process3.90E-03
99GO:0016123: xanthophyll biosynthetic process3.90E-03
100GO:0080110: sporopollenin biosynthetic process3.90E-03
101GO:0046785: microtubule polymerization3.90E-03
102GO:0046907: intracellular transport3.90E-03
103GO:0016120: carotene biosynthetic process3.90E-03
104GO:0009306: protein secretion4.00E-03
105GO:0050665: hydrogen peroxide biosynthetic process4.83E-03
106GO:0016554: cytidine to uridine editing4.83E-03
107GO:0010190: cytochrome b6f complex assembly4.83E-03
108GO:0032973: amino acid export4.83E-03
109GO:0006364: rRNA processing4.99E-03
110GO:1901259: chloroplast rRNA processing5.83E-03
111GO:0030488: tRNA methylation5.83E-03
112GO:0009854: oxidative photosynthetic carbon pathway5.83E-03
113GO:0009648: photoperiodism5.83E-03
114GO:0042372: phylloquinone biosynthetic process5.83E-03
115GO:0034389: lipid particle organization5.83E-03
116GO:0006400: tRNA modification6.89E-03
117GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process6.89E-03
118GO:0010103: stomatal complex morphogenesis6.89E-03
119GO:0032880: regulation of protein localization6.89E-03
120GO:0048528: post-embryonic root development6.89E-03
121GO:0009772: photosynthetic electron transport in photosystem II6.89E-03
122GO:0043090: amino acid import6.89E-03
123GO:0070370: cellular heat acclimation6.89E-03
124GO:0006614: SRP-dependent cotranslational protein targeting to membrane6.89E-03
125GO:0010196: nonphotochemical quenching6.89E-03
126GO:0070413: trehalose metabolism in response to stress8.02E-03
127GO:2000070: regulation of response to water deprivation8.02E-03
128GO:0000105: histidine biosynthetic process8.02E-03
129GO:0009231: riboflavin biosynthetic process8.02E-03
130GO:0052543: callose deposition in cell wall8.02E-03
131GO:0006353: DNA-templated transcription, termination8.02E-03
132GO:0032544: plastid translation9.21E-03
133GO:0017004: cytochrome complex assembly9.21E-03
134GO:0009932: cell tip growth9.21E-03
135GO:0022900: electron transport chain9.21E-03
136GO:0001558: regulation of cell growth9.21E-03
137GO:0010204: defense response signaling pathway, resistance gene-independent9.21E-03
138GO:0009821: alkaloid biosynthetic process1.05E-02
139GO:0010206: photosystem II repair1.05E-02
140GO:0006098: pentose-phosphate shunt1.05E-02
141GO:0080144: amino acid homeostasis1.05E-02
142GO:0006783: heme biosynthetic process1.05E-02
143GO:0043067: regulation of programmed cell death1.18E-02
144GO:0006779: porphyrin-containing compound biosynthetic process1.18E-02
145GO:0006949: syncytium formation1.31E-02
146GO:0019684: photosynthesis, light reaction1.46E-02
147GO:0009089: lysine biosynthetic process via diaminopimelate1.46E-02
148GO:0009773: photosynthetic electron transport in photosystem I1.46E-02
149GO:0009073: aromatic amino acid family biosynthetic process1.46E-02
150GO:1903507: negative regulation of nucleic acid-templated transcription1.46E-02
151GO:0006879: cellular iron ion homeostasis1.46E-02
152GO:0006352: DNA-templated transcription, initiation1.46E-02
153GO:0045087: innate immune response1.51E-02
154GO:0045490: pectin catabolic process1.57E-02
155GO:0005983: starch catabolic process1.60E-02
156GO:0009725: response to hormone1.75E-02
157GO:0006094: gluconeogenesis1.75E-02
158GO:0010020: chloroplast fission1.91E-02
159GO:0071732: cellular response to nitric oxide2.07E-02
160GO:0006071: glycerol metabolic process2.24E-02
161GO:0000162: tryptophan biosynthetic process2.24E-02
162GO:0005992: trehalose biosynthetic process2.41E-02
163GO:0009116: nucleoside metabolic process2.41E-02
164GO:0009944: polarity specification of adaxial/abaxial axis2.41E-02
165GO:0007010: cytoskeleton organization2.41E-02
166GO:0009664: plant-type cell wall organization2.45E-02
167GO:0051302: regulation of cell division2.59E-02
168GO:0016575: histone deacetylation2.59E-02
169GO:0043622: cortical microtubule organization2.59E-02
170GO:0048511: rhythmic process2.77E-02
171GO:0061077: chaperone-mediated protein folding2.77E-02
172GO:0042254: ribosome biogenesis2.80E-02
173GO:0031348: negative regulation of defense response2.95E-02
174GO:0019748: secondary metabolic process2.95E-02
175GO:0009814: defense response, incompatible interaction2.95E-02
176GO:2000022: regulation of jasmonic acid mediated signaling pathway2.95E-02
177GO:0035428: hexose transmembrane transport2.95E-02
178GO:0071369: cellular response to ethylene stimulus3.14E-02
179GO:0001944: vasculature development3.14E-02
180GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.14E-02
181GO:0010584: pollen exine formation3.33E-02
182GO:0048366: leaf development3.35E-02
183GO:0016117: carotenoid biosynthetic process3.53E-02
184GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.53E-02
185GO:0051028: mRNA transport3.53E-02
186GO:0008284: positive regulation of cell proliferation3.53E-02
187GO:0005975: carbohydrate metabolic process3.59E-02
188GO:0008033: tRNA processing3.73E-02
189GO:0048653: anther development3.73E-02
190GO:0010197: polar nucleus fusion3.94E-02
191GO:0046323: glucose import3.94E-02
192GO:0009958: positive gravitropism3.94E-02
193GO:0042752: regulation of circadian rhythm4.14E-02
194GO:0009646: response to absence of light4.14E-02
195GO:0015979: photosynthesis4.20E-02
196GO:0019252: starch biosynthetic process4.36E-02
197GO:0000302: response to reactive oxygen species4.57E-02
198GO:0002229: defense response to oomycetes4.57E-02
199GO:0016032: viral process4.79E-02
RankGO TermAdjusted P value
1GO:0015267: channel activity0.00E+00
2GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
3GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
4GO:0005048: signal sequence binding0.00E+00
5GO:0004076: biotin synthase activity0.00E+00
6GO:0043136: glycerol-3-phosphatase activity0.00E+00
7GO:0000121: glycerol-1-phosphatase activity0.00E+00
8GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
9GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
10GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
11GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
12GO:0008115: sarcosine oxidase activity0.00E+00
13GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
14GO:0050613: delta14-sterol reductase activity0.00E+00
15GO:0051721: protein phosphatase 2A binding0.00E+00
16GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
17GO:0042903: tubulin deacetylase activity0.00E+00
18GO:0043014: alpha-tubulin binding0.00E+00
19GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
20GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
21GO:0045435: lycopene epsilon cyclase activity0.00E+00
22GO:0004822: isoleucine-tRNA ligase activity0.00E+00
23GO:0004823: leucine-tRNA ligase activity0.00E+00
24GO:0004326: tetrahydrofolylpolyglutamate synthase activity8.79E-06
25GO:0002161: aminoacyl-tRNA editing activity3.02E-05
26GO:0016851: magnesium chelatase activity6.54E-05
27GO:0016149: translation release factor activity, codon specific6.54E-05
28GO:0000049: tRNA binding1.08E-04
29GO:0008237: metallopeptidase activity1.35E-04
30GO:0004176: ATP-dependent peptidase activity3.27E-04
31GO:0016788: hydrolase activity, acting on ester bonds4.12E-04
32GO:0030570: pectate lyase activity4.15E-04
33GO:0052856: NADHX epimerase activity4.45E-04
34GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.45E-04
35GO:0052857: NADPHX epimerase activity4.45E-04
36GO:0005344: oxygen transporter activity4.45E-04
37GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity4.45E-04
38GO:0005227: calcium activated cation channel activity4.45E-04
39GO:0004733: pyridoxamine-phosphate oxidase activity4.45E-04
40GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity4.45E-04
41GO:0004856: xylulokinase activity4.45E-04
42GO:0009496: plastoquinol--plastocyanin reductase activity4.45E-04
43GO:0050308: sugar-phosphatase activity4.45E-04
44GO:0004813: alanine-tRNA ligase activity4.45E-04
45GO:0019203: carbohydrate phosphatase activity4.45E-04
46GO:0004853: uroporphyrinogen decarboxylase activity4.45E-04
47GO:0003747: translation release factor activity7.90E-04
48GO:0017118: lipoyltransferase activity9.61E-04
49GO:0009977: proton motive force dependent protein transmembrane transporter activity9.61E-04
50GO:0016415: octanoyltransferase activity9.61E-04
51GO:0004817: cysteine-tRNA ligase activity9.61E-04
52GO:0003919: FMN adenylyltransferase activity9.61E-04
53GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity9.61E-04
54GO:0004829: threonine-tRNA ligase activity9.61E-04
55GO:0019156: isoamylase activity9.61E-04
56GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase9.61E-04
57GO:0004826: phenylalanine-tRNA ligase activity9.61E-04
58GO:0070402: NADPH binding1.57E-03
59GO:0015462: ATPase-coupled protein transmembrane transporter activity1.57E-03
60GO:0004180: carboxypeptidase activity1.57E-03
61GO:0004222: metalloendopeptidase activity2.06E-03
62GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.27E-03
63GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity2.27E-03
64GO:0001872: (1->3)-beta-D-glucan binding2.27E-03
65GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity2.27E-03
66GO:0019201: nucleotide kinase activity2.27E-03
67GO:0048487: beta-tubulin binding2.27E-03
68GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity2.27E-03
69GO:0005528: FK506 binding2.54E-03
70GO:0008891: glycolate oxidase activity3.05E-03
71GO:0046556: alpha-L-arabinofuranosidase activity3.05E-03
72GO:0004659: prenyltransferase activity3.05E-03
73GO:0016279: protein-lysine N-methyltransferase activity3.05E-03
74GO:0001053: plastid sigma factor activity3.05E-03
75GO:0004045: aminoacyl-tRNA hydrolase activity3.05E-03
76GO:0016987: sigma factor activity3.05E-03
77GO:0009044: xylan 1,4-beta-xylosidase activity3.05E-03
78GO:0019199: transmembrane receptor protein kinase activity3.05E-03
79GO:0042277: peptide binding3.05E-03
80GO:0016773: phosphotransferase activity, alcohol group as acceptor3.90E-03
81GO:0004040: amidase activity3.90E-03
82GO:0004812: aminoacyl-tRNA ligase activity4.34E-03
83GO:0042578: phosphoric ester hydrolase activity4.83E-03
84GO:2001070: starch binding4.83E-03
85GO:0080030: methyl indole-3-acetate esterase activity4.83E-03
86GO:0004332: fructose-bisphosphate aldolase activity4.83E-03
87GO:0004526: ribonuclease P activity4.83E-03
88GO:0004556: alpha-amylase activity4.83E-03
89GO:0010181: FMN binding5.44E-03
90GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.83E-03
91GO:0004017: adenylate kinase activity5.83E-03
92GO:0004144: diacylglycerol O-acyltransferase activity5.83E-03
93GO:0005261: cation channel activity5.83E-03
94GO:0005337: nucleoside transmembrane transporter activity8.02E-03
95GO:0008312: 7S RNA binding8.02E-03
96GO:0043022: ribosome binding8.02E-03
97GO:0004033: aldo-keto reductase (NADP) activity8.02E-03
98GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)9.21E-03
99GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.05E-02
100GO:0008236: serine-type peptidase activity1.13E-02
101GO:0016829: lyase activity1.15E-02
102GO:0016844: strictosidine synthase activity1.18E-02
103GO:0005381: iron ion transmembrane transporter activity1.18E-02
104GO:0004805: trehalose-phosphatase activity1.31E-02
105GO:0003723: RNA binding1.37E-02
106GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.38E-02
107GO:0047372: acylglycerol lipase activity1.46E-02
108GO:0003746: translation elongation factor activity1.51E-02
109GO:0031072: heat shock protein binding1.75E-02
110GO:0004565: beta-galactosidase activity1.75E-02
111GO:0008266: poly(U) RNA binding1.91E-02
112GO:0008083: growth factor activity1.91E-02
113GO:0004185: serine-type carboxypeptidase activity1.95E-02
114GO:0004519: endonuclease activity1.98E-02
115GO:0051537: 2 iron, 2 sulfur cluster binding2.11E-02
116GO:0043621: protein self-association2.11E-02
117GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.24E-02
118GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.24E-02
119GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.24E-02
120GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.28E-02
121GO:0051536: iron-sulfur cluster binding2.41E-02
122GO:0004407: histone deacetylase activity2.41E-02
123GO:0003714: transcription corepressor activity2.41E-02
124GO:0051087: chaperone binding2.59E-02
125GO:0015079: potassium ion transmembrane transporter activity2.59E-02
126GO:0016491: oxidoreductase activity2.76E-02
127GO:0016787: hydrolase activity2.91E-02
128GO:0005525: GTP binding3.11E-02
129GO:0022891: substrate-specific transmembrane transporter activity3.14E-02
130GO:0003756: protein disulfide isomerase activity3.33E-02
131GO:0008080: N-acetyltransferase activity3.94E-02
132GO:0052689: carboxylic ester hydrolase activity4.04E-02
133GO:0005355: glucose transmembrane transporter activity4.14E-02
134GO:0050662: coenzyme binding4.14E-02
135GO:0004872: receptor activity4.36E-02
136GO:0019843: rRNA binding4.67E-02
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Gene type



Gene DE type