Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G48320

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
2GO:0015690: aluminum cation transport0.00E+00
3GO:1900367: positive regulation of defense response to insect0.00E+00
4GO:0002376: immune system process0.00E+00
5GO:0010324: membrane invagination0.00E+00
6GO:0071327: cellular response to trehalose stimulus0.00E+00
7GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
8GO:0010200: response to chitin9.34E-14
9GO:0019725: cellular homeostasis3.83E-06
10GO:0009751: response to salicylic acid8.08E-06
11GO:0006470: protein dephosphorylation4.33E-05
12GO:0060548: negative regulation of cell death5.52E-05
13GO:0009266: response to temperature stimulus6.11E-05
14GO:0010225: response to UV-C8.74E-05
15GO:0009759: indole glucosinolate biosynthetic process1.27E-04
16GO:0043090: amino acid import2.27E-04
17GO:1900056: negative regulation of leaf senescence2.27E-04
18GO:0010150: leaf senescence2.43E-04
19GO:0009737: response to abscisic acid2.85E-04
20GO:0051938: L-glutamate import2.89E-04
21GO:0009609: response to symbiotic bacterium2.89E-04
22GO:0010421: hydrogen peroxide-mediated programmed cell death2.89E-04
23GO:0019478: D-amino acid catabolic process2.89E-04
24GO:0006562: proline catabolic process2.89E-04
25GO:0007229: integrin-mediated signaling pathway2.89E-04
26GO:1901183: positive regulation of camalexin biosynthetic process2.89E-04
27GO:0009270: response to humidity2.89E-04
28GO:0050691: regulation of defense response to virus by host2.89E-04
29GO:1900384: regulation of flavonol biosynthetic process2.89E-04
30GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.03E-04
31GO:0043091: L-arginine import6.34E-04
32GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.34E-04
33GO:0010133: proline catabolic process to glutamate6.34E-04
34GO:0015802: basic amino acid transport6.34E-04
35GO:0010618: aerenchyma formation6.34E-04
36GO:0008361: regulation of cell size7.74E-04
37GO:0007034: vacuolar transport9.86E-04
38GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.03E-03
39GO:0009653: anatomical structure morphogenesis1.03E-03
40GO:0009062: fatty acid catabolic process1.03E-03
41GO:1900140: regulation of seedling development1.03E-03
42GO:0045793: positive regulation of cell size1.03E-03
43GO:0010186: positive regulation of cellular defense response1.03E-03
44GO:0009611: response to wounding1.21E-03
45GO:0042742: defense response to bacterium1.42E-03
46GO:0043207: response to external biotic stimulus1.47E-03
47GO:0072583: clathrin-dependent endocytosis1.47E-03
48GO:0006537: glutamate biosynthetic process1.47E-03
49GO:0002679: respiratory burst involved in defense response1.47E-03
50GO:0015696: ammonium transport1.47E-03
51GO:0046836: glycolipid transport1.47E-03
52GO:0048194: Golgi vesicle budding1.47E-03
53GO:0034219: carbohydrate transmembrane transport1.47E-03
54GO:0070301: cellular response to hydrogen peroxide1.47E-03
55GO:0051707: response to other organism1.51E-03
56GO:0031348: negative regulation of defense response1.79E-03
57GO:0071456: cellular response to hypoxia1.79E-03
58GO:0006468: protein phosphorylation1.84E-03
59GO:0009625: response to insect1.95E-03
60GO:0009652: thigmotropism1.97E-03
61GO:0045088: regulation of innate immune response1.97E-03
62GO:1902584: positive regulation of response to water deprivation1.97E-03
63GO:0072488: ammonium transmembrane transport1.97E-03
64GO:0006621: protein retention in ER lumen1.97E-03
65GO:1901002: positive regulation of response to salt stress1.97E-03
66GO:0080142: regulation of salicylic acid biosynthetic process1.97E-03
67GO:1901141: regulation of lignin biosynthetic process1.97E-03
68GO:0046345: abscisic acid catabolic process1.97E-03
69GO:0010483: pollen tube reception1.97E-03
70GO:0045927: positive regulation of growth2.52E-03
71GO:0009651: response to salt stress2.85E-03
72GO:0009646: response to absence of light2.87E-03
73GO:0009626: plant-type hypersensitive response2.96E-03
74GO:0032973: amino acid export3.11E-03
75GO:0010942: positive regulation of cell death3.11E-03
76GO:0010193: response to ozone3.30E-03
77GO:0034389: lipid particle organization3.74E-03
78GO:0009094: L-phenylalanine biosynthetic process3.74E-03
79GO:0045926: negative regulation of growth3.74E-03
80GO:0009612: response to mechanical stimulus3.74E-03
81GO:0010310: regulation of hydrogen peroxide metabolic process3.74E-03
82GO:0046777: protein autophosphorylation4.02E-03
83GO:0080186: developmental vegetative growth4.41E-03
84GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.41E-03
85GO:0010161: red light signaling pathway4.41E-03
86GO:0009610: response to symbiotic fungus4.41E-03
87GO:0009414: response to water deprivation4.46E-03
88GO:0006979: response to oxidative stress4.74E-03
89GO:0001666: response to hypoxia4.76E-03
90GO:0035556: intracellular signal transduction4.77E-03
91GO:0045892: negative regulation of transcription, DNA-templated4.88E-03
92GO:0009788: negative regulation of abscisic acid-activated signaling pathway5.03E-03
93GO:0035265: organ growth5.12E-03
94GO:0009787: regulation of abscisic acid-activated signaling pathway5.12E-03
95GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.12E-03
96GO:0010120: camalexin biosynthetic process5.87E-03
97GO:0030968: endoplasmic reticulum unfolded protein response5.87E-03
98GO:2000031: regulation of salicylic acid mediated signaling pathway5.87E-03
99GO:0010099: regulation of photomorphogenesis5.87E-03
100GO:0051865: protein autoubiquitination6.65E-03
101GO:0080144: amino acid homeostasis6.65E-03
102GO:0009835: fruit ripening6.65E-03
103GO:0009753: response to jasmonic acid7.30E-03
104GO:1900426: positive regulation of defense response to bacterium7.48E-03
105GO:0006865: amino acid transport7.53E-03
106GO:0009617: response to bacterium8.68E-03
107GO:0009682: induced systemic resistance9.22E-03
108GO:0052544: defense response by callose deposition in cell wall9.22E-03
109GO:0012501: programmed cell death1.01E-02
110GO:0002213: defense response to insect1.01E-02
111GO:0015706: nitrate transport1.01E-02
112GO:0006952: defense response1.01E-02
113GO:0010105: negative regulation of ethylene-activated signaling pathway1.01E-02
114GO:0055046: microgametogenesis1.11E-02
115GO:0009636: response to toxic substance1.15E-02
116GO:0002237: response to molecule of bacterial origin1.21E-02
117GO:0031347: regulation of defense response1.23E-02
118GO:0010167: response to nitrate1.31E-02
119GO:0046854: phosphatidylinositol phosphorylation1.31E-02
120GO:0009969: xyloglucan biosynthetic process1.31E-02
121GO:0006486: protein glycosylation1.38E-02
122GO:0009738: abscisic acid-activated signaling pathway1.49E-02
123GO:0009116: nucleoside metabolic process1.52E-02
124GO:0009863: salicylic acid mediated signaling pathway1.52E-02
125GO:0080147: root hair cell development1.52E-02
126GO:0005992: trehalose biosynthetic process1.52E-02
127GO:0080167: response to karrikin1.59E-02
128GO:0019915: lipid storage1.75E-02
129GO:0003333: amino acid transmembrane transport1.75E-02
130GO:0009620: response to fungus1.79E-02
131GO:0035428: hexose transmembrane transport1.86E-02
132GO:0016226: iron-sulfur cluster assembly1.86E-02
133GO:2000022: regulation of jasmonic acid mediated signaling pathway1.86E-02
134GO:0030433: ubiquitin-dependent ERAD pathway1.86E-02
135GO:0009693: ethylene biosynthetic process1.98E-02
136GO:0018105: peptidyl-serine phosphorylation2.02E-02
137GO:0009742: brassinosteroid mediated signaling pathway2.08E-02
138GO:0006351: transcription, DNA-templated2.13E-02
139GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.23E-02
140GO:0070417: cellular response to cold2.23E-02
141GO:0010118: stomatal movement2.35E-02
142GO:0006662: glycerol ether metabolic process2.48E-02
143GO:0046323: glucose import2.48E-02
144GO:0009741: response to brassinosteroid2.48E-02
145GO:0006629: lipid metabolic process2.60E-02
146GO:0009408: response to heat2.60E-02
147GO:0008654: phospholipid biosynthetic process2.75E-02
148GO:0071554: cell wall organization or biogenesis2.88E-02
149GO:0006635: fatty acid beta-oxidation2.88E-02
150GO:0016032: viral process3.02E-02
151GO:0019760: glucosinolate metabolic process3.31E-02
152GO:0006904: vesicle docking involved in exocytosis3.45E-02
153GO:0009873: ethylene-activated signaling pathway3.57E-02
154GO:0051607: defense response to virus3.60E-02
155GO:0009911: positive regulation of flower development3.75E-02
156GO:0007166: cell surface receptor signaling pathway3.87E-02
157GO:0010029: regulation of seed germination3.90E-02
158GO:0009816: defense response to bacterium, incompatible interaction3.90E-02
159GO:0010468: regulation of gene expression4.04E-02
160GO:0042128: nitrate assimilation4.05E-02
161GO:0009627: systemic acquired resistance4.05E-02
162GO:0048573: photoperiodism, flowering4.21E-02
163GO:0016049: cell growth4.37E-02
164GO:0008219: cell death4.53E-02
165GO:0007275: multicellular organism development4.58E-02
166GO:0009832: plant-type cell wall biogenesis4.69E-02
167GO:0009407: toxin catabolic process4.85E-02
RankGO TermAdjusted P value
1GO:0034639: L-amino acid efflux transmembrane transporter activity0.00E+00
2GO:0005046: KDEL sequence binding0.00E+00
3GO:0051499: D-aminoacyl-tRNA deacylase activity0.00E+00
4GO:0004168: dolichol kinase activity0.00E+00
5GO:0043565: sequence-specific DNA binding5.16E-05
6GO:0004722: protein serine/threonine phosphatase activity2.85E-04
7GO:0004657: proline dehydrogenase activity2.89E-04
8GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity2.89E-04
9GO:2001147: camalexin binding2.89E-04
10GO:0031127: alpha-(1,2)-fucosyltransferase activity2.89E-04
11GO:0090353: polygalacturonase inhibitor activity2.89E-04
12GO:0010179: IAA-Ala conjugate hydrolase activity2.89E-04
13GO:0032050: clathrin heavy chain binding2.89E-04
14GO:0008809: carnitine racemase activity2.89E-04
15GO:2001227: quercitrin binding2.89E-04
16GO:0005509: calcium ion binding3.41E-04
17GO:0016301: kinase activity9.32E-04
18GO:0005515: protein binding1.40E-03
19GO:0015181: arginine transmembrane transporter activity1.47E-03
20GO:0016656: monodehydroascorbate reductase (NADH) activity1.47E-03
21GO:0004165: dodecenoyl-CoA delta-isomerase activity1.47E-03
22GO:0015189: L-lysine transmembrane transporter activity1.47E-03
23GO:0017089: glycolipid transporter activity1.47E-03
24GO:0043424: protein histidine kinase binding1.49E-03
25GO:0046923: ER retention sequence binding1.97E-03
26GO:0005313: L-glutamate transmembrane transporter activity1.97E-03
27GO:0047769: arogenate dehydratase activity1.97E-03
28GO:0004664: prephenate dehydratase activity1.97E-03
29GO:0051861: glycolipid binding1.97E-03
30GO:0015171: amino acid transmembrane transporter activity2.51E-03
31GO:0010294: abscisic acid glucosyltransferase activity2.52E-03
32GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.52E-03
33GO:0019901: protein kinase binding3.08E-03
34GO:0008519: ammonium transmembrane transporter activity3.11E-03
35GO:0004605: phosphatidate cytidylyltransferase activity3.11E-03
36GO:0004012: phospholipid-translocating ATPase activity3.74E-03
37GO:0004656: procollagen-proline 4-dioxygenase activity3.74E-03
38GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.24E-03
39GO:0043295: glutathione binding4.41E-03
40GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity4.41E-03
41GO:0044212: transcription regulatory region DNA binding4.67E-03
42GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity5.12E-03
43GO:0005544: calcium-dependent phospholipid binding5.12E-03
44GO:0004869: cysteine-type endopeptidase inhibitor activity5.12E-03
45GO:0004714: transmembrane receptor protein tyrosine kinase activity5.12E-03
46GO:0009931: calcium-dependent protein serine/threonine kinase activity5.32E-03
47GO:0004806: triglyceride lipase activity5.61E-03
48GO:0004721: phosphoprotein phosphatase activity5.61E-03
49GO:0004683: calmodulin-dependent protein kinase activity5.61E-03
50GO:0004430: 1-phosphatidylinositol 4-kinase activity5.87E-03
51GO:0008417: fucosyltransferase activity6.65E-03
52GO:0015174: basic amino acid transmembrane transporter activity7.48E-03
53GO:0015112: nitrate transmembrane transporter activity7.48E-03
54GO:0004805: trehalose-phosphatase activity8.33E-03
55GO:0030234: enzyme regulator activity8.33E-03
56GO:0004712: protein serine/threonine/tyrosine kinase activity8.61E-03
57GO:0005543: phospholipid binding9.22E-03
58GO:0004672: protein kinase activity9.90E-03
59GO:0005524: ATP binding1.09E-02
60GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.11E-02
61GO:0051119: sugar transmembrane transporter activity1.31E-02
62GO:0004190: aspartic-type endopeptidase activity1.31E-02
63GO:0016298: lipase activity1.42E-02
64GO:0031418: L-ascorbic acid binding1.52E-02
65GO:0004707: MAP kinase activity1.75E-02
66GO:0033612: receptor serine/threonine kinase binding1.75E-02
67GO:0003700: transcription factor activity, sequence-specific DNA binding1.94E-02
68GO:0015035: protein disulfide oxidoreductase activity2.02E-02
69GO:0016740: transferase activity2.10E-02
70GO:0047134: protein-disulfide reductase activity2.23E-02
71GO:0005355: glucose transmembrane transporter activity2.61E-02
72GO:0004791: thioredoxin-disulfide reductase activity2.61E-02
73GO:0004872: receptor activity2.75E-02
74GO:0004197: cysteine-type endopeptidase activity3.02E-02
75GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.16E-02
76GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.16E-02
77GO:0008237: metallopeptidase activity3.45E-02
78GO:0016413: O-acetyltransferase activity3.60E-02
79GO:0016597: amino acid binding3.60E-02
80GO:0004674: protein serine/threonine kinase activity4.19E-02
81GO:0042802: identical protein binding4.30E-02
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Gene type



Gene DE type