GO Enrichment Analysis of Co-expressed Genes with
AT1G48030
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
| 2 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 3 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
| 4 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 5 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 6 | GO:0009647: skotomorphogenesis | 1.30E-05 |
| 7 | GO:0006021: inositol biosynthetic process | 2.40E-05 |
| 8 | GO:0043686: co-translational protein modification | 1.77E-04 |
| 9 | GO:0043087: regulation of GTPase activity | 1.77E-04 |
| 10 | GO:0034337: RNA folding | 1.77E-04 |
| 11 | GO:0051171: regulation of nitrogen compound metabolic process | 1.77E-04 |
| 12 | GO:0010362: negative regulation of anion channel activity by blue light | 1.77E-04 |
| 13 | GO:0031426: polycistronic mRNA processing | 1.77E-04 |
| 14 | GO:0000481: maturation of 5S rRNA | 1.77E-04 |
| 15 | GO:0006659: phosphatidylserine biosynthetic process | 1.77E-04 |
| 16 | GO:0010155: regulation of proton transport | 4.01E-04 |
| 17 | GO:0006568: tryptophan metabolic process | 4.01E-04 |
| 18 | GO:0015804: neutral amino acid transport | 4.01E-04 |
| 19 | GO:0030187: melatonin biosynthetic process | 4.01E-04 |
| 20 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 4.01E-04 |
| 21 | GO:0010020: chloroplast fission | 5.04E-04 |
| 22 | GO:0019853: L-ascorbic acid biosynthetic process | 5.64E-04 |
| 23 | GO:0033591: response to L-ascorbic acid | 6.55E-04 |
| 24 | GO:0009405: pathogenesis | 6.55E-04 |
| 25 | GO:0006753: nucleoside phosphate metabolic process | 6.55E-04 |
| 26 | GO:0010589: leaf proximal/distal pattern formation | 6.55E-04 |
| 27 | GO:0080055: low-affinity nitrate transport | 6.55E-04 |
| 28 | GO:0051604: protein maturation | 6.55E-04 |
| 29 | GO:0007017: microtubule-based process | 7.64E-04 |
| 30 | GO:0009585: red, far-red light phototransduction | 9.17E-04 |
| 31 | GO:0006166: purine ribonucleoside salvage | 9.34E-04 |
| 32 | GO:0010239: chloroplast mRNA processing | 9.34E-04 |
| 33 | GO:0006164: purine nucleotide biosynthetic process | 9.34E-04 |
| 34 | GO:0009963: positive regulation of flavonoid biosynthetic process | 9.34E-04 |
| 35 | GO:0010255: glucose mediated signaling pathway | 9.34E-04 |
| 36 | GO:0046739: transport of virus in multicellular host | 9.34E-04 |
| 37 | GO:0006168: adenine salvage | 9.34E-04 |
| 38 | GO:0043572: plastid fission | 9.34E-04 |
| 39 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 1.24E-03 |
| 40 | GO:0009649: entrainment of circadian clock | 1.24E-03 |
| 41 | GO:0008295: spermidine biosynthetic process | 1.24E-03 |
| 42 | GO:0009902: chloroplast relocation | 1.24E-03 |
| 43 | GO:0007018: microtubule-based movement | 1.44E-03 |
| 44 | GO:0009791: post-embryonic development | 1.55E-03 |
| 45 | GO:0031365: N-terminal protein amino acid modification | 1.57E-03 |
| 46 | GO:1902183: regulation of shoot apical meristem development | 1.57E-03 |
| 47 | GO:0044209: AMP salvage | 1.57E-03 |
| 48 | GO:0010158: abaxial cell fate specification | 1.57E-03 |
| 49 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.57E-03 |
| 50 | GO:0016120: carotene biosynthetic process | 1.57E-03 |
| 51 | GO:0046283: anthocyanin-containing compound metabolic process | 1.57E-03 |
| 52 | GO:0009904: chloroplast accumulation movement | 1.57E-03 |
| 53 | GO:0010236: plastoquinone biosynthetic process | 1.57E-03 |
| 54 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.57E-03 |
| 55 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.94E-03 |
| 56 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.94E-03 |
| 57 | GO:0048831: regulation of shoot system development | 1.94E-03 |
| 58 | GO:0046855: inositol phosphate dephosphorylation | 1.94E-03 |
| 59 | GO:0042372: phylloquinone biosynthetic process | 2.32E-03 |
| 60 | GO:0048280: vesicle fusion with Golgi apparatus | 2.32E-03 |
| 61 | GO:0009903: chloroplast avoidance movement | 2.32E-03 |
| 62 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 2.74E-03 |
| 63 | GO:0015937: coenzyme A biosynthetic process | 2.74E-03 |
| 64 | GO:0007623: circadian rhythm | 2.84E-03 |
| 65 | GO:0009231: riboflavin biosynthetic process | 3.17E-03 |
| 66 | GO:0016559: peroxisome fission | 3.17E-03 |
| 67 | GO:0043068: positive regulation of programmed cell death | 3.17E-03 |
| 68 | GO:0010078: maintenance of root meristem identity | 3.17E-03 |
| 69 | GO:0032508: DNA duplex unwinding | 3.17E-03 |
| 70 | GO:0006811: ion transport | 3.41E-03 |
| 71 | GO:0048527: lateral root development | 3.57E-03 |
| 72 | GO:0010119: regulation of stomatal movement | 3.57E-03 |
| 73 | GO:0043562: cellular response to nitrogen levels | 3.63E-03 |
| 74 | GO:0009637: response to blue light | 3.91E-03 |
| 75 | GO:0048507: meristem development | 4.10E-03 |
| 76 | GO:0010206: photosystem II repair | 4.10E-03 |
| 77 | GO:2000024: regulation of leaf development | 4.10E-03 |
| 78 | GO:0006189: 'de novo' IMP biosynthetic process | 4.10E-03 |
| 79 | GO:0009638: phototropism | 4.60E-03 |
| 80 | GO:0010018: far-red light signaling pathway | 4.60E-03 |
| 81 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.60E-03 |
| 82 | GO:0010267: production of ta-siRNAs involved in RNA interference | 4.60E-03 |
| 83 | GO:0009640: photomorphogenesis | 5.03E-03 |
| 84 | GO:0043069: negative regulation of programmed cell death | 5.11E-03 |
| 85 | GO:0045036: protein targeting to chloroplast | 5.11E-03 |
| 86 | GO:0009641: shade avoidance | 5.11E-03 |
| 87 | GO:0006896: Golgi to vacuole transport | 5.11E-03 |
| 88 | GO:0009416: response to light stimulus | 5.37E-03 |
| 89 | GO:0009684: indoleacetic acid biosynthetic process | 5.65E-03 |
| 90 | GO:0000038: very long-chain fatty acid metabolic process | 5.65E-03 |
| 91 | GO:0000272: polysaccharide catabolic process | 5.65E-03 |
| 92 | GO:0009723: response to ethylene | 5.94E-03 |
| 93 | GO:0006790: sulfur compound metabolic process | 6.20E-03 |
| 94 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.20E-03 |
| 95 | GO:0030036: actin cytoskeleton organization | 6.78E-03 |
| 96 | GO:0009767: photosynthetic electron transport chain | 6.78E-03 |
| 97 | GO:0010588: cotyledon vascular tissue pattern formation | 6.78E-03 |
| 98 | GO:0009785: blue light signaling pathway | 6.78E-03 |
| 99 | GO:0030048: actin filament-based movement | 6.78E-03 |
| 100 | GO:0048467: gynoecium development | 7.37E-03 |
| 101 | GO:0010143: cutin biosynthetic process | 7.37E-03 |
| 102 | GO:0046854: phosphatidylinositol phosphorylation | 7.98E-03 |
| 103 | GO:0042753: positive regulation of circadian rhythm | 8.61E-03 |
| 104 | GO:0000027: ribosomal large subunit assembly | 9.26E-03 |
| 105 | GO:0009944: polarity specification of adaxial/abaxial axis | 9.26E-03 |
| 106 | GO:0007010: cytoskeleton organization | 9.26E-03 |
| 107 | GO:0080147: root hair cell development | 9.26E-03 |
| 108 | GO:0010187: negative regulation of seed germination | 9.26E-03 |
| 109 | GO:0048278: vesicle docking | 1.06E-02 |
| 110 | GO:0003333: amino acid transmembrane transport | 1.06E-02 |
| 111 | GO:0009814: defense response, incompatible interaction | 1.13E-02 |
| 112 | GO:0035428: hexose transmembrane transport | 1.13E-02 |
| 113 | GO:0006012: galactose metabolic process | 1.20E-02 |
| 114 | GO:0071215: cellular response to abscisic acid stimulus | 1.20E-02 |
| 115 | GO:0071369: cellular response to ethylene stimulus | 1.20E-02 |
| 116 | GO:0016117: carotenoid biosynthetic process | 1.35E-02 |
| 117 | GO:0042147: retrograde transport, endosome to Golgi | 1.35E-02 |
| 118 | GO:0010087: phloem or xylem histogenesis | 1.43E-02 |
| 119 | GO:0080022: primary root development | 1.43E-02 |
| 120 | GO:0046323: glucose import | 1.50E-02 |
| 121 | GO:0045489: pectin biosynthetic process | 1.50E-02 |
| 122 | GO:0010154: fruit development | 1.50E-02 |
| 123 | GO:0009958: positive gravitropism | 1.50E-02 |
| 124 | GO:0010305: leaf vascular tissue pattern formation | 1.50E-02 |
| 125 | GO:0061025: membrane fusion | 1.58E-02 |
| 126 | GO:0009851: auxin biosynthetic process | 1.66E-02 |
| 127 | GO:0006623: protein targeting to vacuole | 1.66E-02 |
| 128 | GO:0010183: pollen tube guidance | 1.66E-02 |
| 129 | GO:0048825: cotyledon development | 1.66E-02 |
| 130 | GO:0008654: phospholipid biosynthetic process | 1.66E-02 |
| 131 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.75E-02 |
| 132 | GO:0010583: response to cyclopentenone | 1.83E-02 |
| 133 | GO:0016032: viral process | 1.83E-02 |
| 134 | GO:0030163: protein catabolic process | 1.91E-02 |
| 135 | GO:0010468: regulation of gene expression | 2.00E-02 |
| 136 | GO:0009639: response to red or far red light | 2.00E-02 |
| 137 | GO:0016126: sterol biosynthetic process | 2.27E-02 |
| 138 | GO:0010027: thylakoid membrane organization | 2.27E-02 |
| 139 | GO:0009409: response to cold | 2.45E-02 |
| 140 | GO:0006906: vesicle fusion | 2.45E-02 |
| 141 | GO:0015995: chlorophyll biosynthetic process | 2.55E-02 |
| 142 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.55E-02 |
| 143 | GO:0048573: photoperiodism, flowering | 2.55E-02 |
| 144 | GO:0009658: chloroplast organization | 2.60E-02 |
| 145 | GO:0055114: oxidation-reduction process | 2.71E-02 |
| 146 | GO:0018298: protein-chromophore linkage | 2.74E-02 |
| 147 | GO:0000160: phosphorelay signal transduction system | 2.84E-02 |
| 148 | GO:0016567: protein ubiquitination | 2.93E-02 |
| 149 | GO:0006499: N-terminal protein myristoylation | 2.94E-02 |
| 150 | GO:0006508: proteolysis | 2.98E-02 |
| 151 | GO:0009910: negative regulation of flower development | 3.04E-02 |
| 152 | GO:0006865: amino acid transport | 3.14E-02 |
| 153 | GO:0080167: response to karrikin | 3.22E-02 |
| 154 | GO:0009867: jasmonic acid mediated signaling pathway | 3.24E-02 |
| 155 | GO:0046777: protein autophosphorylation | 3.44E-02 |
| 156 | GO:0044550: secondary metabolite biosynthetic process | 3.50E-02 |
| 157 | GO:0006887: exocytosis | 3.67E-02 |
| 158 | GO:0006631: fatty acid metabolic process | 3.67E-02 |
| 159 | GO:0042546: cell wall biogenesis | 4.00E-02 |
| 160 | GO:0009644: response to high light intensity | 4.11E-02 |
| 161 | GO:0009737: response to abscisic acid | 4.73E-02 |
| 162 | GO:0006281: DNA repair | 4.73E-02 |
| 163 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.92E-02 |
| 164 | GO:0010224: response to UV-B | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036033: mediator complex binding | 0.00E+00 |
| 2 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
| 3 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 4 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 5 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 6 | GO:0016166: phytoene dehydrogenase activity | 0.00E+00 |
| 7 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
| 8 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 9 | GO:0008017: microtubule binding | 4.85E-06 |
| 10 | GO:0000293: ferric-chelate reductase activity | 5.77E-05 |
| 11 | GO:0042802: identical protein binding | 9.50E-05 |
| 12 | GO:0004328: formamidase activity | 1.77E-04 |
| 13 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.77E-04 |
| 14 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.77E-04 |
| 15 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.77E-04 |
| 16 | GO:0010945: CoA pyrophosphatase activity | 1.77E-04 |
| 17 | GO:0042586: peptide deformylase activity | 1.77E-04 |
| 18 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 4.01E-04 |
| 19 | GO:0004766: spermidine synthase activity | 4.01E-04 |
| 20 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.01E-04 |
| 21 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.01E-04 |
| 22 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.01E-04 |
| 23 | GO:0004512: inositol-3-phosphate synthase activity | 4.01E-04 |
| 24 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 4.01E-04 |
| 25 | GO:0016630: protochlorophyllide reductase activity | 4.01E-04 |
| 26 | GO:0048531: beta-1,3-galactosyltransferase activity | 4.01E-04 |
| 27 | GO:0015172: acidic amino acid transmembrane transporter activity | 4.01E-04 |
| 28 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 6.55E-04 |
| 29 | GO:0003913: DNA photolyase activity | 6.55E-04 |
| 30 | GO:0009882: blue light photoreceptor activity | 9.34E-04 |
| 31 | GO:0035198: miRNA binding | 9.34E-04 |
| 32 | GO:0000254: C-4 methylsterol oxidase activity | 9.34E-04 |
| 33 | GO:0015175: neutral amino acid transmembrane transporter activity | 9.34E-04 |
| 34 | GO:0048027: mRNA 5'-UTR binding | 9.34E-04 |
| 35 | GO:0003999: adenine phosphoribosyltransferase activity | 9.34E-04 |
| 36 | GO:0016851: magnesium chelatase activity | 9.34E-04 |
| 37 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 9.34E-04 |
| 38 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 9.34E-04 |
| 39 | GO:0003777: microtubule motor activity | 1.04E-03 |
| 40 | GO:0005506: iron ion binding | 1.12E-03 |
| 41 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.57E-03 |
| 42 | GO:0016846: carbon-sulfur lyase activity | 1.57E-03 |
| 43 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.94E-03 |
| 44 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.94E-03 |
| 45 | GO:0102229: amylopectin maltohydrolase activity | 1.94E-03 |
| 46 | GO:0000210: NAD+ diphosphatase activity | 1.94E-03 |
| 47 | GO:0016208: AMP binding | 1.94E-03 |
| 48 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.95E-03 |
| 49 | GO:0005200: structural constituent of cytoskeleton | 2.12E-03 |
| 50 | GO:0003924: GTPase activity | 2.25E-03 |
| 51 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.32E-03 |
| 52 | GO:0016161: beta-amylase activity | 2.32E-03 |
| 53 | GO:0009927: histidine phosphotransfer kinase activity | 2.32E-03 |
| 54 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.32E-03 |
| 55 | GO:0008236: serine-type peptidase activity | 2.94E-03 |
| 56 | GO:0005525: GTP binding | 3.00E-03 |
| 57 | GO:0004033: aldo-keto reductase (NADP) activity | 3.17E-03 |
| 58 | GO:0043022: ribosome binding | 3.17E-03 |
| 59 | GO:0000149: SNARE binding | 4.27E-03 |
| 60 | GO:0005484: SNAP receptor activity | 5.03E-03 |
| 61 | GO:0035091: phosphatidylinositol binding | 5.44E-03 |
| 62 | GO:0005198: structural molecule activity | 5.66E-03 |
| 63 | GO:0000155: phosphorelay sensor kinase activity | 6.78E-03 |
| 64 | GO:0003725: double-stranded RNA binding | 6.78E-03 |
| 65 | GO:0008081: phosphoric diester hydrolase activity | 6.78E-03 |
| 66 | GO:0016491: oxidoreductase activity | 6.99E-03 |
| 67 | GO:0003774: motor activity | 7.37E-03 |
| 68 | GO:0008146: sulfotransferase activity | 7.98E-03 |
| 69 | GO:0019825: oxygen binding | 9.18E-03 |
| 70 | GO:0020037: heme binding | 9.57E-03 |
| 71 | GO:0016746: transferase activity, transferring acyl groups | 9.95E-03 |
| 72 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.06E-02 |
| 73 | GO:0008080: N-acetyltransferase activity | 1.50E-02 |
| 74 | GO:0001085: RNA polymerase II transcription factor binding | 1.50E-02 |
| 75 | GO:0010181: FMN binding | 1.58E-02 |
| 76 | GO:0005355: glucose transmembrane transporter activity | 1.58E-02 |
| 77 | GO:0016791: phosphatase activity | 2.00E-02 |
| 78 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.09E-02 |
| 79 | GO:0004842: ubiquitin-protein transferase activity | 2.53E-02 |
| 80 | GO:0004721: phosphoprotein phosphatase activity | 2.55E-02 |
| 81 | GO:0004672: protein kinase activity | 2.76E-02 |
| 82 | GO:0016740: transferase activity | 2.82E-02 |
| 83 | GO:0005096: GTPase activator activity | 2.84E-02 |
| 84 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.04E-02 |
| 85 | GO:0005515: protein binding | 3.18E-02 |
| 86 | GO:0004497: monooxygenase activity | 3.22E-02 |
| 87 | GO:0004185: serine-type carboxypeptidase activity | 3.88E-02 |
| 88 | GO:0043621: protein self-association | 4.11E-02 |
| 89 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.15E-02 |
| 90 | GO:0015293: symporter activity | 4.22E-02 |
| 91 | GO:0046872: metal ion binding | 4.29E-02 |