GO Enrichment Analysis of Co-expressed Genes with
AT1G42550
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010412: mannan metabolic process | 0.00E+00 |
| 2 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 3 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 4 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 5 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 6 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
| 7 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 8 | GO:0045176: apical protein localization | 0.00E+00 |
| 9 | GO:0031129: inductive cell-cell signaling | 0.00E+00 |
| 10 | GO:0071000: response to magnetism | 0.00E+00 |
| 11 | GO:0010068: protoderm histogenesis | 0.00E+00 |
| 12 | GO:0009099: valine biosynthetic process | 5.87E-05 |
| 13 | GO:0009082: branched-chain amino acid biosynthetic process | 5.87E-05 |
| 14 | GO:0009097: isoleucine biosynthetic process | 1.27E-04 |
| 15 | GO:0072387: flavin adenine dinucleotide metabolic process | 1.46E-04 |
| 16 | GO:0006264: mitochondrial DNA replication | 1.46E-04 |
| 17 | GO:0033259: plastid DNA replication | 1.46E-04 |
| 18 | GO:0045488: pectin metabolic process | 1.46E-04 |
| 19 | GO:0006177: GMP biosynthetic process | 1.46E-04 |
| 20 | GO:0010450: inflorescence meristem growth | 1.46E-04 |
| 21 | GO:0010482: regulation of epidermal cell division | 1.46E-04 |
| 22 | GO:0009638: phototropism | 1.88E-04 |
| 23 | GO:0099402: plant organ development | 3.33E-04 |
| 24 | GO:0042814: monopolar cell growth | 3.33E-04 |
| 25 | GO:0010343: singlet oxygen-mediated programmed cell death | 3.33E-04 |
| 26 | GO:1901529: positive regulation of anion channel activity | 3.33E-04 |
| 27 | GO:2000039: regulation of trichome morphogenesis | 3.33E-04 |
| 28 | GO:0010115: regulation of abscisic acid biosynthetic process | 3.33E-04 |
| 29 | GO:1900871: chloroplast mRNA modification | 3.33E-04 |
| 30 | GO:0010617: circadian regulation of calcium ion oscillation | 3.33E-04 |
| 31 | GO:0007154: cell communication | 3.33E-04 |
| 32 | GO:0051604: protein maturation | 5.47E-04 |
| 33 | GO:0016050: vesicle organization | 5.47E-04 |
| 34 | GO:0045165: cell fate commitment | 5.47E-04 |
| 35 | GO:0051127: positive regulation of actin nucleation | 5.47E-04 |
| 36 | GO:1902448: positive regulation of shade avoidance | 5.47E-04 |
| 37 | GO:0070475: rRNA base methylation | 5.47E-04 |
| 38 | GO:0045604: regulation of epidermal cell differentiation | 5.47E-04 |
| 39 | GO:1901672: positive regulation of systemic acquired resistance | 5.47E-04 |
| 40 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 5.47E-04 |
| 41 | GO:0043693: monoterpene biosynthetic process | 5.47E-04 |
| 42 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 7.83E-04 |
| 43 | GO:0051639: actin filament network formation | 7.83E-04 |
| 44 | GO:0048645: animal organ formation | 7.83E-04 |
| 45 | GO:0048530: fruit morphogenesis | 7.83E-04 |
| 46 | GO:1901332: negative regulation of lateral root development | 7.83E-04 |
| 47 | GO:0010182: sugar mediated signaling pathway | 1.03E-03 |
| 48 | GO:0009902: chloroplast relocation | 1.04E-03 |
| 49 | GO:0009165: nucleotide biosynthetic process | 1.04E-03 |
| 50 | GO:0051764: actin crosslink formation | 1.04E-03 |
| 51 | GO:0051322: anaphase | 1.04E-03 |
| 52 | GO:0046355: mannan catabolic process | 1.04E-03 |
| 53 | GO:0015846: polyamine transport | 1.04E-03 |
| 54 | GO:1902347: response to strigolactone | 1.04E-03 |
| 55 | GO:1902183: regulation of shoot apical meristem development | 1.31E-03 |
| 56 | GO:0010158: abaxial cell fate specification | 1.31E-03 |
| 57 | GO:0032876: negative regulation of DNA endoreduplication | 1.31E-03 |
| 58 | GO:0006544: glycine metabolic process | 1.31E-03 |
| 59 | GO:0046785: microtubule polymerization | 1.31E-03 |
| 60 | GO:0010117: photoprotection | 1.31E-03 |
| 61 | GO:0046283: anthocyanin-containing compound metabolic process | 1.31E-03 |
| 62 | GO:0032502: developmental process | 1.35E-03 |
| 63 | GO:0009635: response to herbicide | 1.61E-03 |
| 64 | GO:0006561: proline biosynthetic process | 1.61E-03 |
| 65 | GO:0006563: L-serine metabolic process | 1.61E-03 |
| 66 | GO:0048827: phyllome development | 1.61E-03 |
| 67 | GO:0009959: negative gravitropism | 1.61E-03 |
| 68 | GO:1901371: regulation of leaf morphogenesis | 1.61E-03 |
| 69 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.61E-03 |
| 70 | GO:0060918: auxin transport | 1.61E-03 |
| 71 | GO:0006139: nucleobase-containing compound metabolic process | 1.61E-03 |
| 72 | GO:0000741: karyogamy | 1.61E-03 |
| 73 | GO:0009117: nucleotide metabolic process | 1.61E-03 |
| 74 | GO:0048444: floral organ morphogenesis | 1.93E-03 |
| 75 | GO:0009648: photoperiodism | 1.93E-03 |
| 76 | GO:0010310: regulation of hydrogen peroxide metabolic process | 1.93E-03 |
| 77 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.93E-03 |
| 78 | GO:0042372: phylloquinone biosynthetic process | 1.93E-03 |
| 79 | GO:2000033: regulation of seed dormancy process | 1.93E-03 |
| 80 | GO:0007623: circadian rhythm | 2.00E-03 |
| 81 | GO:0051510: regulation of unidimensional cell growth | 2.27E-03 |
| 82 | GO:0010161: red light signaling pathway | 2.27E-03 |
| 83 | GO:0050829: defense response to Gram-negative bacterium | 2.27E-03 |
| 84 | GO:0010444: guard mother cell differentiation | 2.27E-03 |
| 85 | GO:0033386: geranylgeranyl diphosphate biosynthetic process | 2.63E-03 |
| 86 | GO:0042255: ribosome assembly | 2.63E-03 |
| 87 | GO:0006353: DNA-templated transcription, termination | 2.63E-03 |
| 88 | GO:0009704: de-etiolation | 2.63E-03 |
| 89 | GO:0032875: regulation of DNA endoreduplication | 2.63E-03 |
| 90 | GO:0010093: specification of floral organ identity | 3.00E-03 |
| 91 | GO:0010099: regulation of photomorphogenesis | 3.00E-03 |
| 92 | GO:0010100: negative regulation of photomorphogenesis | 3.00E-03 |
| 93 | GO:0006997: nucleus organization | 3.00E-03 |
| 94 | GO:0000373: Group II intron splicing | 3.40E-03 |
| 95 | GO:0045337: farnesyl diphosphate biosynthetic process | 3.40E-03 |
| 96 | GO:2000024: regulation of leaf development | 3.40E-03 |
| 97 | GO:0033384: geranyl diphosphate biosynthetic process | 3.40E-03 |
| 98 | GO:0006783: heme biosynthetic process | 3.40E-03 |
| 99 | GO:0009658: chloroplast organization | 3.47E-03 |
| 100 | GO:0009416: response to light stimulus | 3.52E-03 |
| 101 | GO:1900426: positive regulation of defense response to bacterium | 3.81E-03 |
| 102 | GO:0009098: leucine biosynthetic process | 3.81E-03 |
| 103 | GO:1900865: chloroplast RNA modification | 3.81E-03 |
| 104 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.81E-03 |
| 105 | GO:0009688: abscisic acid biosynthetic process | 4.23E-03 |
| 106 | GO:0010162: seed dormancy process | 4.23E-03 |
| 107 | GO:0009299: mRNA transcription | 4.23E-03 |
| 108 | GO:0006535: cysteine biosynthetic process from serine | 4.23E-03 |
| 109 | GO:0009750: response to fructose | 4.67E-03 |
| 110 | GO:0006415: translational termination | 4.67E-03 |
| 111 | GO:0046777: protein autophosphorylation | 4.97E-03 |
| 112 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.13E-03 |
| 113 | GO:0010229: inflorescence development | 5.60E-03 |
| 114 | GO:0030036: actin cytoskeleton organization | 5.60E-03 |
| 115 | GO:0010075: regulation of meristem growth | 5.60E-03 |
| 116 | GO:0009725: response to hormone | 5.60E-03 |
| 117 | GO:0009785: blue light signaling pathway | 5.60E-03 |
| 118 | GO:0010540: basipetal auxin transport | 6.09E-03 |
| 119 | GO:0009933: meristem structural organization | 6.09E-03 |
| 120 | GO:0090351: seedling development | 6.59E-03 |
| 121 | GO:0010030: positive regulation of seed germination | 6.59E-03 |
| 122 | GO:0009740: gibberellic acid mediated signaling pathway | 6.89E-03 |
| 123 | GO:0010025: wax biosynthetic process | 7.10E-03 |
| 124 | GO:2000377: regulation of reactive oxygen species metabolic process | 7.63E-03 |
| 125 | GO:0005992: trehalose biosynthetic process | 7.63E-03 |
| 126 | GO:0019344: cysteine biosynthetic process | 7.63E-03 |
| 127 | GO:0009944: polarity specification of adaxial/abaxial axis | 7.63E-03 |
| 128 | GO:0007010: cytoskeleton organization | 7.63E-03 |
| 129 | GO:0010187: negative regulation of seed germination | 7.63E-03 |
| 130 | GO:0051017: actin filament bundle assembly | 7.63E-03 |
| 131 | GO:0008299: isoprenoid biosynthetic process | 8.18E-03 |
| 132 | GO:0035428: hexose transmembrane transport | 9.30E-03 |
| 133 | GO:0009686: gibberellin biosynthetic process | 9.89E-03 |
| 134 | GO:0010091: trichome branching | 1.05E-02 |
| 135 | GO:0042127: regulation of cell proliferation | 1.05E-02 |
| 136 | GO:0016117: carotenoid biosynthetic process | 1.11E-02 |
| 137 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.11E-02 |
| 138 | GO:0008033: tRNA processing | 1.17E-02 |
| 139 | GO:0010087: phloem or xylem histogenesis | 1.17E-02 |
| 140 | GO:0010118: stomatal movement | 1.17E-02 |
| 141 | GO:0042631: cellular response to water deprivation | 1.17E-02 |
| 142 | GO:0000226: microtubule cytoskeleton organization | 1.17E-02 |
| 143 | GO:0042335: cuticle development | 1.17E-02 |
| 144 | GO:0010197: polar nucleus fusion | 1.24E-02 |
| 145 | GO:0046323: glucose import | 1.24E-02 |
| 146 | GO:0008360: regulation of cell shape | 1.24E-02 |
| 147 | GO:0010154: fruit development | 1.24E-02 |
| 148 | GO:0045490: pectin catabolic process | 1.27E-02 |
| 149 | GO:0042752: regulation of circadian rhythm | 1.30E-02 |
| 150 | GO:0009646: response to absence of light | 1.30E-02 |
| 151 | GO:0048825: cotyledon development | 1.37E-02 |
| 152 | GO:0009735: response to cytokinin | 1.38E-02 |
| 153 | GO:0010583: response to cyclopentenone | 1.50E-02 |
| 154 | GO:0010090: trichome morphogenesis | 1.57E-02 |
| 155 | GO:0006464: cellular protein modification process | 1.64E-02 |
| 156 | GO:0071805: potassium ion transmembrane transport | 1.72E-02 |
| 157 | GO:0000910: cytokinesis | 1.79E-02 |
| 158 | GO:0009911: positive regulation of flower development | 1.86E-02 |
| 159 | GO:0010029: regulation of seed germination | 1.94E-02 |
| 160 | GO:0048573: photoperiodism, flowering | 2.09E-02 |
| 161 | GO:0015995: chlorophyll biosynthetic process | 2.09E-02 |
| 162 | GO:0018298: protein-chromophore linkage | 2.25E-02 |
| 163 | GO:0000160: phosphorelay signal transduction system | 2.33E-02 |
| 164 | GO:0010218: response to far red light | 2.41E-02 |
| 165 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.53E-02 |
| 166 | GO:0009637: response to blue light | 2.66E-02 |
| 167 | GO:0006839: mitochondrial transport | 2.92E-02 |
| 168 | GO:0006897: endocytosis | 3.01E-02 |
| 169 | GO:0007165: signal transduction | 3.07E-02 |
| 170 | GO:0010114: response to red light | 3.19E-02 |
| 171 | GO:0008283: cell proliferation | 3.19E-02 |
| 172 | GO:0009640: photomorphogenesis | 3.19E-02 |
| 173 | GO:0009644: response to high light intensity | 3.37E-02 |
| 174 | GO:0009965: leaf morphogenesis | 3.47E-02 |
| 175 | GO:0006855: drug transmembrane transport | 3.56E-02 |
| 176 | GO:0006260: DNA replication | 3.65E-02 |
| 177 | GO:0006397: mRNA processing | 3.75E-02 |
| 178 | GO:0016310: phosphorylation | 3.89E-02 |
| 179 | GO:0009585: red, far-red light phototransduction | 3.94E-02 |
| 180 | GO:0006813: potassium ion transport | 3.94E-02 |
| 181 | GO:0009736: cytokinin-activated signaling pathway | 3.94E-02 |
| 182 | GO:0009909: regulation of flower development | 4.24E-02 |
| 183 | GO:0006417: regulation of translation | 4.24E-02 |
| 184 | GO:0048367: shoot system development | 4.54E-02 |
| 185 | GO:0048316: seed development | 4.54E-02 |
| 186 | GO:0042545: cell wall modification | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 2 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
| 3 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0019808: polyamine binding | 0.00E+00 |
| 5 | GO:0052907: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity | 0.00E+00 |
| 6 | GO:0050139: nicotinate-N-glucosyltransferase activity | 1.46E-04 |
| 7 | GO:0010313: phytochrome binding | 1.46E-04 |
| 8 | GO:0003984: acetolactate synthase activity | 1.46E-04 |
| 9 | GO:0050017: L-3-cyanoalanine synthase activity | 3.33E-04 |
| 10 | GO:0017118: lipoyltransferase activity | 3.33E-04 |
| 11 | GO:0043425: bHLH transcription factor binding | 3.33E-04 |
| 12 | GO:0003938: IMP dehydrogenase activity | 3.33E-04 |
| 13 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 3.33E-04 |
| 14 | GO:0009882: blue light photoreceptor activity | 7.83E-04 |
| 15 | GO:0052654: L-leucine transaminase activity | 7.83E-04 |
| 16 | GO:0052655: L-valine transaminase activity | 7.83E-04 |
| 17 | GO:0035529: NADH pyrophosphatase activity | 7.83E-04 |
| 18 | GO:0052656: L-isoleucine transaminase activity | 7.83E-04 |
| 19 | GO:0003727: single-stranded RNA binding | 8.29E-04 |
| 20 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.04E-03 |
| 21 | GO:0004737: pyruvate decarboxylase activity | 1.04E-03 |
| 22 | GO:0008409: 5'-3' exonuclease activity | 1.04E-03 |
| 23 | GO:0016985: mannan endo-1,4-beta-mannosidase activity | 1.04E-03 |
| 24 | GO:0080032: methyl jasmonate esterase activity | 1.04E-03 |
| 25 | GO:0004084: branched-chain-amino-acid transaminase activity | 1.04E-03 |
| 26 | GO:0004372: glycine hydroxymethyltransferase activity | 1.31E-03 |
| 27 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.31E-03 |
| 28 | GO:0030976: thiamine pyrophosphate binding | 1.61E-03 |
| 29 | GO:0016208: AMP binding | 1.61E-03 |
| 30 | GO:0016462: pyrophosphatase activity | 1.61E-03 |
| 31 | GO:0004124: cysteine synthase activity | 1.93E-03 |
| 32 | GO:0003730: mRNA 3'-UTR binding | 1.93E-03 |
| 33 | GO:0008017: microtubule binding | 2.12E-03 |
| 34 | GO:0004311: farnesyltranstransferase activity | 2.63E-03 |
| 35 | GO:0042802: identical protein binding | 2.71E-03 |
| 36 | GO:0003747: translation release factor activity | 3.40E-03 |
| 37 | GO:0004337: geranyltranstransferase activity | 3.40E-03 |
| 38 | GO:0071949: FAD binding | 3.40E-03 |
| 39 | GO:0004805: trehalose-phosphatase activity | 4.23E-03 |
| 40 | GO:0004161: dimethylallyltranstransferase activity | 4.67E-03 |
| 41 | GO:0008794: arsenate reductase (glutaredoxin) activity | 4.67E-03 |
| 42 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.67E-03 |
| 43 | GO:0003725: double-stranded RNA binding | 5.60E-03 |
| 44 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.60E-03 |
| 45 | GO:0004871: signal transducer activity | 6.08E-03 |
| 46 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.09E-03 |
| 47 | GO:0003887: DNA-directed DNA polymerase activity | 7.10E-03 |
| 48 | GO:0005528: FK506 binding | 7.63E-03 |
| 49 | GO:0015079: potassium ion transmembrane transporter activity | 8.18E-03 |
| 50 | GO:0030570: pectate lyase activity | 9.89E-03 |
| 51 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.18E-02 |
| 52 | GO:0001085: RNA polymerase II transcription factor binding | 1.24E-02 |
| 53 | GO:0005355: glucose transmembrane transporter activity | 1.30E-02 |
| 54 | GO:0010181: FMN binding | 1.30E-02 |
| 55 | GO:0003723: RNA binding | 1.41E-02 |
| 56 | GO:0051015: actin filament binding | 1.57E-02 |
| 57 | GO:0000156: phosphorelay response regulator activity | 1.57E-02 |
| 58 | GO:0016788: hydrolase activity, acting on ester bonds | 2.01E-02 |
| 59 | GO:0046872: metal ion binding | 2.03E-02 |
| 60 | GO:0004721: phosphoprotein phosphatase activity | 2.09E-02 |
| 61 | GO:0030247: polysaccharide binding | 2.09E-02 |
| 62 | GO:0005515: protein binding | 2.14E-02 |
| 63 | GO:0015238: drug transmembrane transporter activity | 2.33E-02 |
| 64 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.41E-02 |
| 65 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.49E-02 |
| 66 | GO:0050897: cobalt ion binding | 2.49E-02 |
| 67 | GO:0052689: carboxylic ester hydrolase activity | 2.70E-02 |
| 68 | GO:0042803: protein homodimerization activity | 3.06E-02 |
| 69 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.37E-02 |
| 70 | GO:0043621: protein self-association | 3.37E-02 |
| 71 | GO:0035091: phosphatidylinositol binding | 3.37E-02 |
| 72 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.56E-02 |
| 73 | GO:0051287: NAD binding | 3.65E-02 |
| 74 | GO:0003690: double-stranded DNA binding | 4.04E-02 |
| 75 | GO:0045330: aspartyl esterase activity | 4.24E-02 |
| 76 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.54E-02 |
| 77 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.75E-02 |
| 78 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.75E-02 |
| 79 | GO:0030599: pectinesterase activity | 4.85E-02 |
| 80 | GO:0022857: transmembrane transporter activity | 4.85E-02 |
| 81 | GO:0003779: actin binding | 4.96E-02 |