Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G36320

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031116: positive regulation of microtubule polymerization0.00E+00
2GO:0042817: pyridoxal metabolic process0.00E+00
3GO:0006114: glycerol biosynthetic process0.00E+00
4GO:0046396: D-galacturonate metabolic process0.00E+00
5GO:0071474: cellular hyperosmotic response0.00E+00
6GO:0070125: mitochondrial translational elongation0.00E+00
7GO:0006429: leucyl-tRNA aminoacylation0.00E+00
8GO:1905421: regulation of plant organ morphogenesis0.00E+00
9GO:0043488: regulation of mRNA stability0.00E+00
10GO:0030155: regulation of cell adhesion0.00E+00
11GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
12GO:0017038: protein import0.00E+00
13GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
14GO:0042407: cristae formation0.00E+00
15GO:0090279: regulation of calcium ion import0.00E+00
16GO:0009658: chloroplast organization1.94E-06
17GO:0009793: embryo development ending in seed dormancy1.33E-05
18GO:0006415: translational termination4.47E-05
19GO:0032543: mitochondrial translation1.10E-04
20GO:0045038: protein import into chloroplast thylakoid membrane1.10E-04
21GO:0042547: cell wall modification involved in multidimensional cell growth3.32E-04
22GO:1902458: positive regulation of stomatal opening3.32E-04
23GO:0005991: trehalose metabolic process3.32E-04
24GO:0006747: FAD biosynthetic process3.32E-04
25GO:0006419: alanyl-tRNA aminoacylation3.32E-04
26GO:0000476: maturation of 4.5S rRNA3.32E-04
27GO:0000967: rRNA 5'-end processing3.32E-04
28GO:0070413: trehalose metabolism in response to stress3.52E-04
29GO:0000105: histidine biosynthetic process3.52E-04
30GO:0032544: plastid translation4.31E-04
31GO:1900865: chloroplast RNA modification6.12E-04
32GO:0006782: protoporphyrinogen IX biosynthetic process7.14E-04
33GO:0034755: iron ion transmembrane transport7.24E-04
34GO:0006432: phenylalanyl-tRNA aminoacylation7.24E-04
35GO:0007154: cell communication7.24E-04
36GO:0006423: cysteinyl-tRNA aminoacylation7.24E-04
37GO:0006435: threonyl-tRNA aminoacylation7.24E-04
38GO:1900033: negative regulation of trichome patterning7.24E-04
39GO:0009220: pyrimidine ribonucleotide biosynthetic process7.24E-04
40GO:1903426: regulation of reactive oxygen species biosynthetic process7.24E-04
41GO:0015804: neutral amino acid transport7.24E-04
42GO:0051262: protein tetramerization7.24E-04
43GO:0034470: ncRNA processing7.24E-04
44GO:0006739: NADP metabolic process7.24E-04
45GO:1900871: chloroplast mRNA modification7.24E-04
46GO:0009684: indoleacetic acid biosynthetic process8.23E-04
47GO:0009089: lysine biosynthetic process via diaminopimelate8.23E-04
48GO:0009627: systemic acquired resistance8.66E-04
49GO:0015995: chlorophyll biosynthetic process9.24E-04
50GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.17E-03
51GO:0015940: pantothenate biosynthetic process1.17E-03
52GO:0001578: microtubule bundle formation1.17E-03
53GO:0045493: xylan catabolic process1.17E-03
54GO:0033591: response to L-ascorbic acid1.17E-03
55GO:0048281: inflorescence morphogenesis1.17E-03
56GO:0006508: proteolysis1.45E-03
57GO:0006413: translational initiation1.64E-03
58GO:0005992: trehalose biosynthetic process1.65E-03
59GO:0006424: glutamyl-tRNA aminoacylation1.68E-03
60GO:0006164: purine nucleotide biosynthetic process1.68E-03
61GO:0010148: transpiration1.68E-03
62GO:0006168: adenine salvage1.68E-03
63GO:0043572: plastid fission1.68E-03
64GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.68E-03
65GO:0006166: purine ribonucleoside salvage1.68E-03
66GO:0009102: biotin biosynthetic process1.68E-03
67GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.68E-03
68GO:0008615: pyridoxine biosynthetic process1.68E-03
69GO:0006418: tRNA aminoacylation for protein translation1.82E-03
70GO:0007020: microtubule nucleation2.26E-03
71GO:0071483: cellular response to blue light2.26E-03
72GO:0006734: NADH metabolic process2.26E-03
73GO:0044205: 'de novo' UMP biosynthetic process2.26E-03
74GO:0048629: trichome patterning2.26E-03
75GO:0010109: regulation of photosynthesis2.26E-03
76GO:0051322: anaphase2.26E-03
77GO:0009765: photosynthesis, light harvesting2.26E-03
78GO:0022622: root system development2.26E-03
79GO:0006012: galactose metabolic process2.38E-03
80GO:0016120: carotene biosynthetic process2.89E-03
81GO:0016123: xanthophyll biosynthetic process2.89E-03
82GO:0044209: AMP salvage2.89E-03
83GO:0006465: signal peptide processing2.89E-03
84GO:0046785: microtubule polymerization2.89E-03
85GO:0009958: positive gravitropism3.26E-03
86GO:0032973: amino acid export3.57E-03
87GO:0016554: cytidine to uridine editing3.57E-03
88GO:1901259: chloroplast rRNA processing4.30E-03
89GO:0030488: tRNA methylation4.30E-03
90GO:0009648: photoperiodism4.30E-03
91GO:0009955: adaxial/abaxial pattern specification4.30E-03
92GO:0046835: carbohydrate phosphorylation4.30E-03
93GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process5.07E-03
94GO:0006400: tRNA modification5.07E-03
95GO:0010103: stomatal complex morphogenesis5.07E-03
96GO:0032880: regulation of protein localization5.07E-03
97GO:0009395: phospholipid catabolic process5.07E-03
98GO:0048528: post-embryonic root development5.07E-03
99GO:0043090: amino acid import5.07E-03
100GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.07E-03
101GO:0070370: cellular heat acclimation5.07E-03
102GO:0010027: thylakoid membrane organization5.83E-03
103GO:0042255: ribosome assembly5.89E-03
104GO:0006605: protein targeting5.89E-03
105GO:0006353: DNA-templated transcription, termination5.89E-03
106GO:0010078: maintenance of root meristem identity5.89E-03
107GO:2000070: regulation of response to water deprivation5.89E-03
108GO:0009231: riboflavin biosynthetic process5.89E-03
109GO:0052543: callose deposition in cell wall5.89E-03
110GO:0043562: cellular response to nitrogen levels6.76E-03
111GO:0071482: cellular response to light stimulus6.76E-03
112GO:0022900: electron transport chain6.76E-03
113GO:0001558: regulation of cell growth6.76E-03
114GO:0009657: plastid organization6.76E-03
115GO:0009790: embryo development7.24E-03
116GO:0006783: heme biosynthetic process7.67E-03
117GO:0009821: alkaloid biosynthetic process7.67E-03
118GO:0010206: photosystem II repair7.67E-03
119GO:0080144: amino acid homeostasis7.67E-03
120GO:0005982: starch metabolic process8.61E-03
121GO:0043067: regulation of programmed cell death8.61E-03
122GO:0006779: porphyrin-containing compound biosynthetic process8.61E-03
123GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.61E-03
124GO:0048527: lateral root development8.81E-03
125GO:0006949: syncytium formation9.61E-03
126GO:0045087: innate immune response9.66E-03
127GO:0006879: cellular iron ion homeostasis1.06E-02
128GO:0006352: DNA-templated transcription, initiation1.06E-02
129GO:0019684: photosynthesis, light reaction1.06E-02
130GO:0008380: RNA splicing1.12E-02
131GO:0045037: protein import into chloroplast stroma1.17E-02
132GO:0009409: response to cold1.26E-02
133GO:0009725: response to hormone1.28E-02
134GO:0010588: cotyledon vascular tissue pattern formation1.28E-02
135GO:2000012: regulation of auxin polar transport1.28E-02
136GO:0048467: gynoecium development1.40E-02
137GO:0010020: chloroplast fission1.40E-02
138GO:0071732: cellular response to nitric oxide1.51E-02
139GO:0090351: seedling development1.51E-02
140GO:0019853: L-ascorbic acid biosynthetic process1.51E-02
141GO:0009664: plant-type cell wall organization1.57E-02
142GO:0006833: water transport1.63E-02
143GO:0000162: tryptophan biosynthetic process1.63E-02
144GO:0046686: response to cadmium ion1.64E-02
145GO:0007010: cytoskeleton organization1.76E-02
146GO:0009116: nucleoside metabolic process1.76E-02
147GO:0009944: polarity specification of adaxial/abaxial axis1.76E-02
148GO:0043622: cortical microtubule organization1.89E-02
149GO:0051302: regulation of cell division1.89E-02
150GO:0003333: amino acid transmembrane transport2.02E-02
151GO:0048511: rhythmic process2.02E-02
152GO:0061077: chaperone-mediated protein folding2.02E-02
153GO:0009416: response to light stimulus2.12E-02
154GO:0031348: negative regulation of defense response2.15E-02
155GO:0009814: defense response, incompatible interaction2.15E-02
156GO:0071369: cellular response to ethylene stimulus2.29E-02
157GO:0001944: vasculature development2.29E-02
158GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.29E-02
159GO:0009306: protein secretion2.43E-02
160GO:0006396: RNA processing2.48E-02
161GO:0016117: carotenoid biosynthetic process2.57E-02
162GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.57E-02
163GO:0008284: positive regulation of cell proliferation2.57E-02
164GO:0080022: primary root development2.72E-02
165GO:0008033: tRNA processing2.72E-02
166GO:0034220: ion transmembrane transport2.72E-02
167GO:0010087: phloem or xylem histogenesis2.72E-02
168GO:0010197: polar nucleus fusion2.87E-02
169GO:0010182: sugar mediated signaling pathway2.87E-02
170GO:0042752: regulation of circadian rhythm3.02E-02
171GO:0009646: response to absence of light3.02E-02
172GO:0032259: methylation3.17E-02
173GO:0009851: auxin biosynthetic process3.18E-02
174GO:0048825: cotyledon development3.18E-02
175GO:0016042: lipid catabolic process3.23E-02
176GO:0000302: response to reactive oxygen species3.33E-02
177GO:0032502: developmental process3.49E-02
178GO:0016032: viral process3.49E-02
179GO:0071281: cellular response to iron ion3.66E-02
180GO:0010090: trichome morphogenesis3.66E-02
181GO:0009828: plant-type cell wall loosening3.82E-02
182GO:0045490: pectin catabolic process4.15E-02
183GO:0000910: cytokinesis4.16E-02
184GO:0009451: RNA modification4.24E-02
185GO:0016126: sterol biosynthetic process4.33E-02
186GO:0007166: cell surface receptor signaling pathway4.73E-02
187GO:0010411: xyloglucan metabolic process4.86E-02
RankGO TermAdjusted P value
1GO:0045435: lycopene epsilon cyclase activity0.00E+00
2GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
3GO:0004822: isoleucine-tRNA ligase activity0.00E+00
4GO:0004823: leucine-tRNA ligase activity0.00E+00
5GO:0004636: phosphoribosyl-ATP diphosphatase activity0.00E+00
6GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
7GO:0005048: signal sequence binding0.00E+00
8GO:0004076: biotin synthase activity0.00E+00
9GO:0003937: IMP cyclohydrolase activity0.00E+00
10GO:0043136: glycerol-3-phosphatase activity0.00E+00
11GO:0000121: glycerol-1-phosphatase activity0.00E+00
12GO:0010349: L-galactose dehydrogenase activity0.00E+00
13GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
14GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
15GO:0043864: indoleacetamide hydrolase activity0.00E+00
16GO:0047912: galacturonokinase activity0.00E+00
17GO:0004635: phosphoribosyl-AMP cyclohydrolase activity0.00E+00
18GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
19GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity0.00E+00
20GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
21GO:0050613: delta14-sterol reductase activity0.00E+00
22GO:0002161: aminoacyl-tRNA editing activity1.77E-05
23GO:0003747: translation release factor activity2.02E-05
24GO:0016149: translation release factor activity, codon specific3.91E-05
25GO:0016851: magnesium chelatase activity3.91E-05
26GO:0000049: tRNA binding5.59E-05
27GO:0004040: amidase activity1.10E-04
28GO:0004176: ATP-dependent peptidase activity1.80E-04
29GO:0004853: uroporphyrinogen decarboxylase activity3.32E-04
30GO:0052856: NADHX epimerase activity3.32E-04
31GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.32E-04
32GO:0052857: NADPHX epimerase activity3.32E-04
33GO:0010285: L,L-diaminopimelate aminotransferase activity3.32E-04
34GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.32E-04
35GO:0005227: calcium activated cation channel activity3.32E-04
36GO:0004733: pyridoxamine-phosphate oxidase activity3.32E-04
37GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.32E-04
38GO:0004813: alanine-tRNA ligase activity3.32E-04
39GO:0008237: metallopeptidase activity6.51E-04
40GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase7.24E-04
41GO:0015172: acidic amino acid transmembrane transporter activity7.24E-04
42GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity7.24E-04
43GO:0009977: proton motive force dependent protein transmembrane transporter activity7.24E-04
44GO:0004817: cysteine-tRNA ligase activity7.24E-04
45GO:0003919: FMN adenylyltransferase activity7.24E-04
46GO:0080097: L-tryptophan:pyruvate aminotransferase activity7.24E-04
47GO:0004829: threonine-tRNA ligase activity7.24E-04
48GO:0004826: phenylalanine-tRNA ligase activity7.24E-04
49GO:0016788: hydrolase activity, acting on ester bonds8.10E-04
50GO:0008236: serine-type peptidase activity9.86E-04
51GO:0015462: ATPase-coupled protein transmembrane transporter activity1.17E-03
52GO:0004180: carboxypeptidase activity1.17E-03
53GO:0003913: DNA photolyase activity1.17E-03
54GO:0004222: metalloendopeptidase activity1.19E-03
55GO:0005525: GTP binding1.41E-03
56GO:0005528: FK506 binding1.65E-03
57GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.68E-03
58GO:0001872: (1->3)-beta-D-glucan binding1.68E-03
59GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity1.68E-03
60GO:0015175: neutral amino acid transmembrane transporter activity1.68E-03
61GO:0003999: adenine phosphoribosyltransferase activity1.68E-03
62GO:0042277: peptide binding2.26E-03
63GO:0046556: alpha-L-arabinofuranosidase activity2.26E-03
64GO:0004335: galactokinase activity2.26E-03
65GO:0001053: plastid sigma factor activity2.26E-03
66GO:0004045: aminoacyl-tRNA hydrolase activity2.26E-03
67GO:0016987: sigma factor activity2.26E-03
68GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.26E-03
69GO:0009044: xylan 1,4-beta-xylosidase activity2.26E-03
70GO:0019199: transmembrane receptor protein kinase activity2.26E-03
71GO:0003743: translation initiation factor activity2.32E-03
72GO:0030570: pectate lyase activity2.38E-03
73GO:0004812: aminoacyl-tRNA ligase activity2.80E-03
74GO:0016846: carbon-sulfur lyase activity2.89E-03
75GO:0042578: phosphoric ester hydrolase activity3.57E-03
76GO:2001070: starch binding3.57E-03
77GO:0003730: mRNA 3'-UTR binding4.30E-03
78GO:0005261: cation channel activity4.30E-03
79GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.30E-03
80GO:0016791: phosphatase activity4.88E-03
81GO:0009881: photoreceptor activity5.07E-03
82GO:0008483: transaminase activity5.19E-03
83GO:0043022: ribosome binding5.89E-03
84GO:0004033: aldo-keto reductase (NADP) activity5.89E-03
85GO:0008312: 7S RNA binding5.89E-03
86GO:0008173: RNA methyltransferase activity6.76E-03
87GO:0030247: polysaccharide binding6.87E-03
88GO:0003723: RNA binding8.12E-03
89GO:0016844: strictosidine synthase activity8.61E-03
90GO:0005381: iron ion transmembrane transporter activity8.61E-03
91GO:0003924: GTPase activity8.93E-03
92GO:0008017: microtubule binding9.51E-03
93GO:0004805: trehalose-phosphatase activity9.61E-03
94GO:0003746: translation elongation factor activity9.66E-03
95GO:0003993: acid phosphatase activity1.01E-02
96GO:0047372: acylglycerol lipase activity1.06E-02
97GO:0031072: heat shock protein binding1.28E-02
98GO:0051537: 2 iron, 2 sulfur cluster binding1.35E-02
99GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.40E-02
100GO:0008266: poly(U) RNA binding1.40E-02
101GO:0008083: growth factor activity1.40E-02
102GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.46E-02
103GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.63E-02
104GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.63E-02
105GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.63E-02
106GO:0015171: amino acid transmembrane transporter activity1.87E-02
107GO:0052689: carboxylic ester hydrolase activity2.33E-02
108GO:0003727: single-stranded RNA binding2.43E-02
109GO:0003756: protein disulfide isomerase activity2.43E-02
110GO:0005524: ATP binding2.59E-02
111GO:0019843: rRNA binding3.01E-02
112GO:0010181: FMN binding3.02E-02
113GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.09E-02
114GO:0004872: receptor activity3.18E-02
115GO:0016829: lyase activity3.26E-02
116GO:0030170: pyridoxal phosphate binding3.34E-02
117GO:0004252: serine-type endopeptidase activity3.34E-02
118GO:0004519: endonuclease activity3.71E-02
119GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.87E-02
120GO:0003729: mRNA binding4.06E-02
121GO:0016597: amino acid binding4.16E-02
122GO:0015250: water channel activity4.33E-02
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Gene type



Gene DE type