GO Enrichment Analysis of Co-expressed Genes with
AT1G34065
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0009606: tropism | 0.00E+00 |
| 3 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 4 | GO:0032212: positive regulation of telomere maintenance via telomerase | 0.00E+00 |
| 5 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0032206: positive regulation of telomere maintenance | 0.00E+00 |
| 7 | GO:0090615: mitochondrial mRNA processing | 0.00E+00 |
| 8 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 9 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 10 | GO:0035884: arabinan biosynthetic process | 0.00E+00 |
| 11 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 12 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 13 | GO:0046620: regulation of organ growth | 1.03E-07 |
| 14 | GO:0009416: response to light stimulus | 1.89E-06 |
| 15 | GO:2000038: regulation of stomatal complex development | 6.53E-05 |
| 16 | GO:0009913: epidermal cell differentiation | 1.48E-04 |
| 17 | GO:0042793: transcription from plastid promoter | 1.48E-04 |
| 18 | GO:0009734: auxin-activated signaling pathway | 2.38E-04 |
| 19 | GO:0009926: auxin polar transport | 2.63E-04 |
| 20 | GO:0035987: endodermal cell differentiation | 3.19E-04 |
| 21 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.19E-04 |
| 22 | GO:0015904: tetracycline transport | 3.19E-04 |
| 23 | GO:0034757: negative regulation of iron ion transport | 3.19E-04 |
| 24 | GO:0042659: regulation of cell fate specification | 3.19E-04 |
| 25 | GO:1901537: positive regulation of DNA demethylation | 3.19E-04 |
| 26 | GO:0090558: plant epidermis development | 3.19E-04 |
| 27 | GO:1903866: palisade mesophyll development | 3.19E-04 |
| 28 | GO:0042255: ribosome assembly | 3.32E-04 |
| 29 | GO:0006353: DNA-templated transcription, termination | 3.32E-04 |
| 30 | GO:0007389: pattern specification process | 4.07E-04 |
| 31 | GO:0010252: auxin homeostasis | 5.61E-04 |
| 32 | GO:0010271: regulation of chlorophyll catabolic process | 6.97E-04 |
| 33 | GO:0018026: peptidyl-lysine monomethylation | 6.97E-04 |
| 34 | GO:1900033: negative regulation of trichome patterning | 6.97E-04 |
| 35 | GO:1904143: positive regulation of carotenoid biosynthetic process | 6.97E-04 |
| 36 | GO:0080009: mRNA methylation | 6.97E-04 |
| 37 | GO:2000123: positive regulation of stomatal complex development | 6.97E-04 |
| 38 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.97E-04 |
| 39 | GO:0010569: regulation of double-strand break repair via homologous recombination | 6.97E-04 |
| 40 | GO:2000039: regulation of trichome morphogenesis | 6.97E-04 |
| 41 | GO:0009733: response to auxin | 7.97E-04 |
| 42 | GO:0010588: cotyledon vascular tissue pattern formation | 1.01E-03 |
| 43 | GO:0080117: secondary growth | 1.13E-03 |
| 44 | GO:0090391: granum assembly | 1.13E-03 |
| 45 | GO:0006518: peptide metabolic process | 1.13E-03 |
| 46 | GO:0090708: specification of plant organ axis polarity | 1.13E-03 |
| 47 | GO:1902476: chloride transmembrane transport | 1.62E-03 |
| 48 | GO:0010239: chloroplast mRNA processing | 1.62E-03 |
| 49 | GO:0030104: water homeostasis | 2.18E-03 |
| 50 | GO:0006479: protein methylation | 2.18E-03 |
| 51 | GO:0048629: trichome patterning | 2.18E-03 |
| 52 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.25E-03 |
| 53 | GO:0080110: sporopollenin biosynthetic process | 2.78E-03 |
| 54 | GO:0048497: maintenance of floral organ identity | 2.78E-03 |
| 55 | GO:0016123: xanthophyll biosynthetic process | 2.78E-03 |
| 56 | GO:0032876: negative regulation of DNA endoreduplication | 2.78E-03 |
| 57 | GO:0030308: negative regulation of cell growth | 2.78E-03 |
| 58 | GO:0010375: stomatal complex patterning | 2.78E-03 |
| 59 | GO:0010087: phloem or xylem histogenesis | 2.86E-03 |
| 60 | GO:0009658: chloroplast organization | 3.26E-03 |
| 61 | GO:1902456: regulation of stomatal opening | 3.43E-03 |
| 62 | GO:0048831: regulation of shoot system development | 3.43E-03 |
| 63 | GO:0009959: negative gravitropism | 3.43E-03 |
| 64 | GO:0016554: cytidine to uridine editing | 3.43E-03 |
| 65 | GO:0010315: auxin efflux | 3.43E-03 |
| 66 | GO:0048825: cotyledon development | 3.56E-03 |
| 67 | GO:0080156: mitochondrial mRNA modification | 3.81E-03 |
| 68 | GO:0010583: response to cyclopentenone | 4.06E-03 |
| 69 | GO:0032502: developmental process | 4.06E-03 |
| 70 | GO:1901259: chloroplast rRNA processing | 4.13E-03 |
| 71 | GO:0009942: longitudinal axis specification | 4.13E-03 |
| 72 | GO:0048509: regulation of meristem development | 4.13E-03 |
| 73 | GO:2000037: regulation of stomatal complex patterning | 4.13E-03 |
| 74 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 4.13E-03 |
| 75 | GO:2000067: regulation of root morphogenesis | 4.13E-03 |
| 76 | GO:0071470: cellular response to osmotic stress | 4.13E-03 |
| 77 | GO:0009828: plant-type cell wall loosening | 4.61E-03 |
| 78 | GO:0006821: chloride transport | 4.87E-03 |
| 79 | GO:0015937: coenzyme A biosynthetic process | 4.87E-03 |
| 80 | GO:0010103: stomatal complex morphogenesis | 4.87E-03 |
| 81 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 4.87E-03 |
| 82 | GO:0007050: cell cycle arrest | 4.87E-03 |
| 83 | GO:0010027: thylakoid membrane organization | 5.50E-03 |
| 84 | GO:0001522: pseudouridine synthesis | 5.66E-03 |
| 85 | GO:0055075: potassium ion homeostasis | 5.66E-03 |
| 86 | GO:0048766: root hair initiation | 5.66E-03 |
| 87 | GO:0007186: G-protein coupled receptor signaling pathway | 6.49E-03 |
| 88 | GO:0009657: plastid organization | 6.49E-03 |
| 89 | GO:0009790: embryo development | 6.73E-03 |
| 90 | GO:0048481: plant ovule development | 7.19E-03 |
| 91 | GO:0000373: Group II intron splicing | 7.36E-03 |
| 92 | GO:0000160: phosphorelay signal transduction system | 7.55E-03 |
| 93 | GO:2000280: regulation of root development | 8.27E-03 |
| 94 | GO:0000723: telomere maintenance | 8.27E-03 |
| 95 | GO:1900865: chloroplast RNA modification | 8.27E-03 |
| 96 | GO:0031425: chloroplast RNA processing | 8.27E-03 |
| 97 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 9.22E-03 |
| 98 | GO:0048829: root cap development | 9.22E-03 |
| 99 | GO:0006949: syncytium formation | 9.22E-03 |
| 100 | GO:0031627: telomeric loop formation | 9.22E-03 |
| 101 | GO:0010015: root morphogenesis | 1.02E-02 |
| 102 | GO:0030001: metal ion transport | 1.04E-02 |
| 103 | GO:0008380: RNA splicing | 1.04E-02 |
| 104 | GO:0008361: regulation of cell size | 1.12E-02 |
| 105 | GO:0009691: cytokinin biosynthetic process | 1.23E-02 |
| 106 | GO:0030048: actin filament-based movement | 1.23E-02 |
| 107 | GO:0009767: photosynthetic electron transport chain | 1.23E-02 |
| 108 | GO:0080188: RNA-directed DNA methylation | 1.45E-02 |
| 109 | GO:0009664: plant-type cell wall organization | 1.48E-02 |
| 110 | GO:0006833: water transport | 1.57E-02 |
| 111 | GO:0009736: cytokinin-activated signaling pathway | 1.59E-02 |
| 112 | GO:0080147: root hair cell development | 1.69E-02 |
| 113 | GO:0010073: meristem maintenance | 1.81E-02 |
| 114 | GO:0006825: copper ion transport | 1.81E-02 |
| 115 | GO:0051302: regulation of cell division | 1.81E-02 |
| 116 | GO:0006418: tRNA aminoacylation for protein translation | 1.81E-02 |
| 117 | GO:0006874: cellular calcium ion homeostasis | 1.81E-02 |
| 118 | GO:0003333: amino acid transmembrane transport | 1.94E-02 |
| 119 | GO:0048367: shoot system development | 1.95E-02 |
| 120 | GO:0048316: seed development | 1.95E-02 |
| 121 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.99E-02 |
| 122 | GO:0031348: negative regulation of defense response | 2.07E-02 |
| 123 | GO:0010082: regulation of root meristem growth | 2.20E-02 |
| 124 | GO:0071215: cellular response to abscisic acid stimulus | 2.20E-02 |
| 125 | GO:0010584: pollen exine formation | 2.33E-02 |
| 126 | GO:0006284: base-excision repair | 2.33E-02 |
| 127 | GO:0070417: cellular response to cold | 2.47E-02 |
| 128 | GO:0080022: primary root development | 2.61E-02 |
| 129 | GO:0008033: tRNA processing | 2.61E-02 |
| 130 | GO:0010118: stomatal movement | 2.61E-02 |
| 131 | GO:0042631: cellular response to water deprivation | 2.61E-02 |
| 132 | GO:0010305: leaf vascular tissue pattern formation | 2.75E-02 |
| 133 | GO:0009958: positive gravitropism | 2.75E-02 |
| 134 | GO:0009741: response to brassinosteroid | 2.75E-02 |
| 135 | GO:0007018: microtubule-based movement | 2.90E-02 |
| 136 | GO:0009646: response to absence of light | 2.90E-02 |
| 137 | GO:0009851: auxin biosynthetic process | 3.05E-02 |
| 138 | GO:0009845: seed germination | 3.08E-02 |
| 139 | GO:0071554: cell wall organization or biogenesis | 3.20E-02 |
| 140 | GO:0048364: root development | 3.28E-02 |
| 141 | GO:0019761: glucosinolate biosynthetic process | 3.35E-02 |
| 142 | GO:0009630: gravitropism | 3.35E-02 |
| 143 | GO:0010090: trichome morphogenesis | 3.51E-02 |
| 144 | GO:1901657: glycosyl compound metabolic process | 3.51E-02 |
| 145 | GO:0009639: response to red or far red light | 3.67E-02 |
| 146 | GO:0040008: regulation of growth | 3.74E-02 |
| 147 | GO:0005975: carbohydrate metabolic process | 3.81E-02 |
| 148 | GO:0007267: cell-cell signaling | 3.83E-02 |
| 149 | GO:0009451: RNA modification | 4.01E-02 |
| 150 | GO:0010029: regulation of seed germination | 4.33E-02 |
| 151 | GO:0006974: cellular response to DNA damage stimulus | 4.50E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 2 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
| 3 | GO:0016274: protein-arginine N-methyltransferase activity | 3.19E-04 |
| 4 | GO:0004830: tryptophan-tRNA ligase activity | 3.19E-04 |
| 5 | GO:0004016: adenylate cyclase activity | 3.19E-04 |
| 6 | GO:0004632: phosphopantothenate--cysteine ligase activity | 3.19E-04 |
| 7 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 3.19E-04 |
| 8 | GO:0052381: tRNA dimethylallyltransferase activity | 3.19E-04 |
| 9 | GO:0009672: auxin:proton symporter activity | 5.78E-04 |
| 10 | GO:0008805: carbon-monoxide oxygenase activity | 6.97E-04 |
| 11 | GO:0008493: tetracycline transporter activity | 6.97E-04 |
| 12 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 6.97E-04 |
| 13 | GO:0009884: cytokinin receptor activity | 6.97E-04 |
| 14 | GO:0010329: auxin efflux transmembrane transporter activity | 1.01E-03 |
| 15 | GO:0016805: dipeptidase activity | 1.13E-03 |
| 16 | GO:0005034: osmosensor activity | 1.13E-03 |
| 17 | GO:0003723: RNA binding | 1.27E-03 |
| 18 | GO:0004871: signal transducer activity | 1.53E-03 |
| 19 | GO:0043047: single-stranded telomeric DNA binding | 1.62E-03 |
| 20 | GO:0001872: (1->3)-beta-D-glucan binding | 1.62E-03 |
| 21 | GO:0004930: G-protein coupled receptor activity | 2.18E-03 |
| 22 | GO:0005253: anion channel activity | 2.18E-03 |
| 23 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.18E-03 |
| 24 | GO:0016279: protein-lysine N-methyltransferase activity | 2.18E-03 |
| 25 | GO:0004519: endonuclease activity | 2.37E-03 |
| 26 | GO:0003727: single-stranded RNA binding | 2.45E-03 |
| 27 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.78E-03 |
| 28 | GO:0005247: voltage-gated chloride channel activity | 3.43E-03 |
| 29 | GO:0019901: protein kinase binding | 3.56E-03 |
| 30 | GO:0019900: kinase binding | 4.13E-03 |
| 31 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 4.13E-03 |
| 32 | GO:0016832: aldehyde-lyase activity | 4.13E-03 |
| 33 | GO:0042162: telomeric DNA binding | 4.87E-03 |
| 34 | GO:0019843: rRNA binding | 5.53E-03 |
| 35 | GO:0008173: RNA methyltransferase activity | 6.49E-03 |
| 36 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 6.52E-03 |
| 37 | GO:0004222: metalloendopeptidase activity | 7.93E-03 |
| 38 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 9.12E-03 |
| 39 | GO:0004673: protein histidine kinase activity | 9.22E-03 |
| 40 | GO:0003691: double-stranded telomeric DNA binding | 1.02E-02 |
| 41 | GO:0003725: double-stranded RNA binding | 1.23E-02 |
| 42 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.23E-02 |
| 43 | GO:0031072: heat shock protein binding | 1.23E-02 |
| 44 | GO:0000155: phosphorelay sensor kinase activity | 1.23E-02 |
| 45 | GO:0009982: pseudouridine synthase activity | 1.23E-02 |
| 46 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.34E-02 |
| 47 | GO:0003774: motor activity | 1.34E-02 |
| 48 | GO:0005217: intracellular ligand-gated ion channel activity | 1.45E-02 |
| 49 | GO:0004970: ionotropic glutamate receptor activity | 1.45E-02 |
| 50 | GO:0003690: double-stranded DNA binding | 1.65E-02 |
| 51 | GO:0043424: protein histidine kinase binding | 1.81E-02 |
| 52 | GO:0004650: polygalacturonase activity | 2.07E-02 |
| 53 | GO:0030570: pectate lyase activity | 2.20E-02 |
| 54 | GO:0005215: transporter activity | 2.25E-02 |
| 55 | GO:0004812: aminoacyl-tRNA ligase activity | 2.47E-02 |
| 56 | GO:0001085: RNA polymerase II transcription factor binding | 2.75E-02 |
| 57 | GO:0050662: coenzyme binding | 2.90E-02 |
| 58 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.93E-02 |
| 59 | GO:0004518: nuclease activity | 3.35E-02 |
| 60 | GO:0000156: phosphorelay response regulator activity | 3.51E-02 |
| 61 | GO:0008237: metallopeptidase activity | 3.83E-02 |
| 62 | GO:0005200: structural constituent of cytoskeleton | 3.83E-02 |
| 63 | GO:0016413: O-acetyltransferase activity | 3.99E-02 |
| 64 | GO:0051213: dioxygenase activity | 4.16E-02 |
| 65 | GO:0030247: polysaccharide binding | 4.67E-02 |
| 66 | GO:0102483: scopolin beta-glucosidase activity | 4.67E-02 |
| 67 | GO:0008289: lipid binding | 4.67E-02 |
| 68 | GO:0042802: identical protein binding | 4.96E-02 |