Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G32900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006982: response to lipid hydroperoxide0.00E+00
2GO:0010335: response to non-ionic osmotic stress0.00E+00
3GO:1902171: regulation of tocopherol cyclase activity0.00E+00
4GO:1901918: negative regulation of exoribonuclease activity0.00E+00
5GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
6GO:0046471: phosphatidylglycerol metabolic process0.00E+00
7GO:0016553: base conversion or substitution editing0.00E+00
8GO:1905157: positive regulation of photosynthesis0.00E+00
9GO:0015995: chlorophyll biosynthetic process1.10E-06
10GO:0009704: de-etiolation3.06E-05
11GO:0010362: negative regulation of anion channel activity by blue light6.74E-05
12GO:0015969: guanosine tetraphosphate metabolic process6.74E-05
13GO:0071277: cellular response to calcium ion6.74E-05
14GO:0046467: membrane lipid biosynthetic process6.74E-05
15GO:0043489: RNA stabilization6.74E-05
16GO:0046167: glycerol-3-phosphate biosynthetic process6.74E-05
17GO:0043007: maintenance of rDNA6.74E-05
18GO:0042819: vitamin B6 biosynthetic process1.62E-04
19GO:0006650: glycerophospholipid metabolic process1.62E-04
20GO:0010155: regulation of proton transport1.62E-04
21GO:0055114: oxidation-reduction process1.68E-04
22GO:0046168: glycerol-3-phosphate catabolic process2.75E-04
23GO:0006072: glycerol-3-phosphate metabolic process3.98E-04
24GO:0042823: pyridoxal phosphate biosynthetic process3.98E-04
25GO:0008615: pyridoxine biosynthetic process3.98E-04
26GO:0019464: glycine decarboxylation via glycine cleavage system5.32E-04
27GO:0015994: chlorophyll metabolic process5.32E-04
28GO:0010600: regulation of auxin biosynthetic process5.32E-04
29GO:0006546: glycine catabolic process5.32E-04
30GO:0016123: xanthophyll biosynthetic process6.73E-04
31GO:0009904: chloroplast accumulation movement6.73E-04
32GO:0009643: photosynthetic acclimation8.23E-04
33GO:0009658: chloroplast organization9.40E-04
34GO:0010244: response to low fluence blue light stimulus by blue low-fluence system9.79E-04
35GO:0009903: chloroplast avoidance movement9.79E-04
36GO:0010019: chloroplast-nucleus signaling pathway9.79E-04
37GO:1900056: negative regulation of leaf senescence1.14E-03
38GO:0010161: red light signaling pathway1.14E-03
39GO:0010928: regulation of auxin mediated signaling pathway1.32E-03
40GO:0050821: protein stabilization1.32E-03
41GO:0044550: secondary metabolite biosynthetic process1.36E-03
42GO:0010114: response to red light1.38E-03
43GO:0009932: cell tip growth1.50E-03
44GO:0009657: plastid organization1.50E-03
45GO:0006098: pentose-phosphate shunt1.69E-03
46GO:0090333: regulation of stomatal closure1.69E-03
47GO:0006754: ATP biosynthetic process1.69E-03
48GO:0009638: phototropism1.89E-03
49GO:0010380: regulation of chlorophyll biosynthetic process1.89E-03
50GO:0009408: response to heat1.99E-03
51GO:0009688: abscisic acid biosynthetic process2.10E-03
52GO:0006397: mRNA processing2.10E-03
53GO:0043086: negative regulation of catalytic activity2.18E-03
54GO:0043085: positive regulation of catalytic activity2.31E-03
55GO:0016485: protein processing2.31E-03
56GO:0006396: RNA processing2.69E-03
57GO:0009725: response to hormone2.76E-03
58GO:0006094: gluconeogenesis2.76E-03
59GO:0009785: blue light signaling pathway2.76E-03
60GO:0018107: peptidyl-threonine phosphorylation2.76E-03
61GO:0009718: anthocyanin-containing compound biosynthetic process2.76E-03
62GO:0010207: photosystem II assembly2.99E-03
63GO:0042343: indole glucosinolate metabolic process3.23E-03
64GO:0019762: glucosinolate catabolic process3.48E-03
65GO:0006636: unsaturated fatty acid biosynthetic process3.48E-03
66GO:0009833: plant-type primary cell wall biogenesis3.48E-03
67GO:0006833: water transport3.48E-03
68GO:0098542: defense response to other organism4.26E-03
69GO:0007623: circadian rhythm4.48E-03
70GO:0010017: red or far-red light signaling pathway4.53E-03
71GO:0030433: ubiquitin-dependent ERAD pathway4.53E-03
72GO:0006817: phosphate ion transport5.09E-03
73GO:0009306: protein secretion5.09E-03
74GO:0034220: ion transmembrane transport5.68E-03
75GO:0006520: cellular amino acid metabolic process5.98E-03
76GO:0010182: sugar mediated signaling pathway5.98E-03
77GO:0009646: response to absence of light6.28E-03
78GO:0008654: phospholipid biosynthetic process6.60E-03
79GO:0009788: negative regulation of abscisic acid-activated signaling pathway9.29E-03
80GO:0010411: xyloglucan metabolic process1.00E-02
81GO:0030244: cellulose biosynthetic process1.08E-02
82GO:0018298: protein-chromophore linkage1.08E-02
83GO:0000160: phosphorelay signal transduction system1.11E-02
84GO:0009910: negative regulation of flower development1.19E-02
85GO:0009631: cold acclimation1.19E-02
86GO:0010119: regulation of stomatal movement1.19E-02
87GO:0045087: innate immune response1.27E-02
88GO:0009637: response to blue light1.27E-02
89GO:0034599: cellular response to oxidative stress1.31E-02
90GO:0009744: response to sucrose1.52E-02
91GO:0000209: protein polyubiquitination1.57E-02
92GO:0042546: cell wall biogenesis1.57E-02
93GO:0005975: carbohydrate metabolic process1.71E-02
94GO:0046686: response to cadmium ion1.77E-02
95GO:0042538: hyperosmotic salinity response1.79E-02
96GO:0009585: red, far-red light phototransduction1.88E-02
97GO:0006813: potassium ion transport1.88E-02
98GO:0010224: response to UV-B1.93E-02
99GO:0006857: oligopeptide transport1.97E-02
100GO:0006417: regulation of translation2.02E-02
101GO:0006096: glycolytic process2.12E-02
102GO:0035556: intracellular signal transduction2.38E-02
103GO:0018105: peptidyl-serine phosphorylation2.47E-02
104GO:0045893: positive regulation of transcription, DNA-templated2.59E-02
105GO:0009737: response to abscisic acid2.62E-02
106GO:0055085: transmembrane transport2.86E-02
107GO:0006413: translational initiation3.39E-02
108GO:0009451: RNA modification3.63E-02
109GO:0071555: cell wall organization4.55E-02
110GO:0006979: response to oxidative stress4.58E-02
111GO:0009651: response to salt stress4.58E-02
RankGO TermAdjusted P value
1GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
2GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
3GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
4GO:0046906: tetrapyrrole binding6.74E-05
5GO:0004565: beta-galactosidase activity1.15E-04
6GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity1.62E-04
7GO:0018708: thiol S-methyltransferase activity1.62E-04
8GO:0008728: GTP diphosphokinase activity1.62E-04
9GO:0003729: mRNA binding1.63E-04
10GO:0010277: chlorophyllide a oxygenase [overall] activity2.75E-04
11GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity2.75E-04
12GO:0004375: glycine dehydrogenase (decarboxylating) activity3.98E-04
13GO:0016851: magnesium chelatase activity3.98E-04
14GO:0022890: inorganic cation transmembrane transporter activity3.98E-04
15GO:0009882: blue light photoreceptor activity3.98E-04
16GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen6.73E-04
17GO:0004332: fructose-bisphosphate aldolase activity8.23E-04
18GO:0035673: oligopeptide transmembrane transporter activity8.23E-04
19GO:0003730: mRNA 3'-UTR binding9.79E-04
20GO:0019899: enzyme binding1.14E-03
21GO:0071949: FAD binding1.69E-03
22GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism1.69E-03
23GO:0015386: potassium:proton antiporter activity2.31E-03
24GO:0015198: oligopeptide transporter activity2.53E-03
25GO:0005315: inorganic phosphate transmembrane transporter activity2.76E-03
26GO:0000155: phosphorelay sensor kinase activity2.76E-03
27GO:0008266: poly(U) RNA binding2.99E-03
28GO:0016491: oxidoreductase activity3.17E-03
29GO:0016887: ATPase activity3.47E-03
30GO:0015079: potassium ion transmembrane transporter activity3.99E-03
31GO:0046910: pectinesterase inhibitor activity4.18E-03
32GO:0016760: cellulose synthase (UDP-forming) activity4.81E-03
33GO:0003727: single-stranded RNA binding5.09E-03
34GO:0015299: solute:proton antiporter activity6.28E-03
35GO:0010181: FMN binding6.28E-03
36GO:0004872: receptor activity6.60E-03
37GO:0016762: xyloglucan:xyloglucosyl transferase activity6.91E-03
38GO:0016759: cellulose synthase activity7.90E-03
39GO:0016722: oxidoreductase activity, oxidizing metal ions8.24E-03
40GO:0015250: water channel activity8.93E-03
41GO:0005506: iron ion binding9.87E-03
42GO:0016798: hydrolase activity, acting on glycosyl bonds1.00E-02
43GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.04E-02
44GO:0042803: protein homodimerization activity1.08E-02
45GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.11E-02
46GO:0051537: 2 iron, 2 sulfur cluster binding1.61E-02
47GO:0043621: protein self-association1.61E-02
48GO:0004672: protein kinase activity1.64E-02
49GO:0015293: symporter activity1.65E-02
50GO:0051287: NAD binding1.74E-02
51GO:0003690: double-stranded DNA binding1.93E-02
52GO:0031625: ubiquitin protein ligase binding2.02E-02
53GO:0016874: ligase activity2.31E-02
54GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.89E-02
55GO:0030170: pyridoxal phosphate binding3.05E-02
56GO:0019825: oxygen binding3.21E-02
57GO:0008565: protein transporter activity3.22E-02
58GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.23E-02
59GO:0042802: identical protein binding4.23E-02
60GO:0005524: ATP binding4.59E-02
61GO:0008168: methyltransferase activity4.73E-02
62GO:0046982: protein heterodimerization activity4.80E-02
63GO:0016788: hydrolase activity, acting on ester bonds4.93E-02
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Gene type



Gene DE type