GO Enrichment Analysis of Co-expressed Genes with
AT1G32070
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 3 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 4 | GO:0006021: inositol biosynthetic process | 1.88E-05 |
| 5 | GO:0045038: protein import into chloroplast thylakoid membrane | 3.07E-05 |
| 6 | GO:0009395: phospholipid catabolic process | 8.59E-05 |
| 7 | GO:0051171: regulation of nitrogen compound metabolic process | 1.54E-04 |
| 8 | GO:0000481: maturation of 5S rRNA | 1.54E-04 |
| 9 | GO:0006659: phosphatidylserine biosynthetic process | 1.54E-04 |
| 10 | GO:0043686: co-translational protein modification | 1.54E-04 |
| 11 | GO:1902458: positive regulation of stomatal opening | 1.54E-04 |
| 12 | GO:0034337: RNA folding | 1.54E-04 |
| 13 | GO:0009684: indoleacetic acid biosynthetic process | 2.81E-04 |
| 14 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.23E-04 |
| 15 | GO:0015804: neutral amino acid transport | 3.51E-04 |
| 16 | GO:0016122: xanthophyll metabolic process | 3.51E-04 |
| 17 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.51E-04 |
| 18 | GO:0006568: tryptophan metabolic process | 3.51E-04 |
| 19 | GO:0010143: cutin biosynthetic process | 4.15E-04 |
| 20 | GO:0010207: photosystem II assembly | 4.15E-04 |
| 21 | GO:0019853: L-ascorbic acid biosynthetic process | 4.65E-04 |
| 22 | GO:0010589: leaf proximal/distal pattern formation | 5.75E-04 |
| 23 | GO:0080055: low-affinity nitrate transport | 5.75E-04 |
| 24 | GO:0051604: protein maturation | 5.75E-04 |
| 25 | GO:0045493: xylan catabolic process | 5.75E-04 |
| 26 | GO:0009647: skotomorphogenesis | 8.23E-04 |
| 27 | GO:0010255: glucose mediated signaling pathway | 8.23E-04 |
| 28 | GO:0006168: adenine salvage | 8.23E-04 |
| 29 | GO:0006166: purine ribonucleoside salvage | 8.23E-04 |
| 30 | GO:0009765: photosynthesis, light harvesting | 1.09E-03 |
| 31 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 1.09E-03 |
| 32 | GO:0008295: spermidine biosynthetic process | 1.09E-03 |
| 33 | GO:0016123: xanthophyll biosynthetic process | 1.38E-03 |
| 34 | GO:0044209: AMP salvage | 1.38E-03 |
| 35 | GO:0016120: carotene biosynthetic process | 1.38E-03 |
| 36 | GO:0010117: photoprotection | 1.38E-03 |
| 37 | GO:0010236: plastoquinone biosynthetic process | 1.38E-03 |
| 38 | GO:0031365: N-terminal protein amino acid modification | 1.38E-03 |
| 39 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.70E-03 |
| 40 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.70E-03 |
| 41 | GO:0046855: inositol phosphate dephosphorylation | 1.70E-03 |
| 42 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.70E-03 |
| 43 | GO:0010027: thylakoid membrane organization | 1.96E-03 |
| 44 | GO:0009648: photoperiodism | 2.03E-03 |
| 45 | GO:0048280: vesicle fusion with Golgi apparatus | 2.03E-03 |
| 46 | GO:0015995: chlorophyll biosynthetic process | 2.30E-03 |
| 47 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 2.39E-03 |
| 48 | GO:0016559: peroxisome fission | 2.77E-03 |
| 49 | GO:0010078: maintenance of root meristem identity | 2.77E-03 |
| 50 | GO:0032508: DNA duplex unwinding | 2.77E-03 |
| 51 | GO:2000070: regulation of response to water deprivation | 2.77E-03 |
| 52 | GO:0048527: lateral root development | 2.93E-03 |
| 53 | GO:0015996: chlorophyll catabolic process | 3.16E-03 |
| 54 | GO:0007186: G-protein coupled receptor signaling pathway | 3.16E-03 |
| 55 | GO:0043562: cellular response to nitrogen levels | 3.16E-03 |
| 56 | GO:0010206: photosystem II repair | 3.58E-03 |
| 57 | GO:0006783: heme biosynthetic process | 3.58E-03 |
| 58 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.01E-03 |
| 59 | GO:0010267: production of ta-siRNAs involved in RNA interference | 4.01E-03 |
| 60 | GO:0071577: zinc II ion transmembrane transport | 4.01E-03 |
| 61 | GO:0006896: Golgi to vacuole transport | 4.46E-03 |
| 62 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.46E-03 |
| 63 | GO:0006535: cysteine biosynthetic process from serine | 4.46E-03 |
| 64 | GO:0009688: abscisic acid biosynthetic process | 4.46E-03 |
| 65 | GO:0006790: sulfur compound metabolic process | 5.41E-03 |
| 66 | GO:0045037: protein import into chloroplast stroma | 5.41E-03 |
| 67 | GO:0010588: cotyledon vascular tissue pattern formation | 5.91E-03 |
| 68 | GO:0030036: actin cytoskeleton organization | 5.91E-03 |
| 69 | GO:0048467: gynoecium development | 6.42E-03 |
| 70 | GO:0006541: glutamine metabolic process | 6.42E-03 |
| 71 | GO:0010020: chloroplast fission | 6.42E-03 |
| 72 | GO:0046854: phosphatidylinositol phosphorylation | 6.95E-03 |
| 73 | GO:0000162: tryptophan biosynthetic process | 7.49E-03 |
| 74 | GO:0042753: positive regulation of circadian rhythm | 7.49E-03 |
| 75 | GO:0006833: water transport | 7.49E-03 |
| 76 | GO:0019344: cysteine biosynthetic process | 8.05E-03 |
| 77 | GO:0000027: ribosomal large subunit assembly | 8.05E-03 |
| 78 | GO:0010187: negative regulation of seed germination | 8.05E-03 |
| 79 | GO:0003333: amino acid transmembrane transport | 9.22E-03 |
| 80 | GO:0016998: cell wall macromolecule catabolic process | 9.22E-03 |
| 81 | GO:0048511: rhythmic process | 9.22E-03 |
| 82 | GO:0071215: cellular response to abscisic acid stimulus | 1.04E-02 |
| 83 | GO:0006012: galactose metabolic process | 1.04E-02 |
| 84 | GO:0019722: calcium-mediated signaling | 1.11E-02 |
| 85 | GO:0016117: carotenoid biosynthetic process | 1.17E-02 |
| 86 | GO:0042147: retrograde transport, endosome to Golgi | 1.17E-02 |
| 87 | GO:0080022: primary root development | 1.24E-02 |
| 88 | GO:0034220: ion transmembrane transport | 1.24E-02 |
| 89 | GO:0010087: phloem or xylem histogenesis | 1.24E-02 |
| 90 | GO:0010305: leaf vascular tissue pattern formation | 1.31E-02 |
| 91 | GO:0009958: positive gravitropism | 1.31E-02 |
| 92 | GO:0006520: cellular amino acid metabolic process | 1.31E-02 |
| 93 | GO:0010182: sugar mediated signaling pathway | 1.31E-02 |
| 94 | GO:0007623: circadian rhythm | 1.37E-02 |
| 95 | GO:0006623: protein targeting to vacuole | 1.44E-02 |
| 96 | GO:0009791: post-embryonic development | 1.44E-02 |
| 97 | GO:0010183: pollen tube guidance | 1.44E-02 |
| 98 | GO:0048825: cotyledon development | 1.44E-02 |
| 99 | GO:0008654: phospholipid biosynthetic process | 1.44E-02 |
| 100 | GO:0009851: auxin biosynthetic process | 1.44E-02 |
| 101 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.52E-02 |
| 102 | GO:0010583: response to cyclopentenone | 1.59E-02 |
| 103 | GO:0016032: viral process | 1.59E-02 |
| 104 | GO:0030163: protein catabolic process | 1.66E-02 |
| 105 | GO:0009416: response to light stimulus | 1.71E-02 |
| 106 | GO:0007267: cell-cell signaling | 1.81E-02 |
| 107 | GO:0016126: sterol biosynthetic process | 1.97E-02 |
| 108 | GO:0009627: systemic acquired resistance | 2.13E-02 |
| 109 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.21E-02 |
| 110 | GO:0010411: xyloglucan metabolic process | 2.21E-02 |
| 111 | GO:0016311: dephosphorylation | 2.29E-02 |
| 112 | GO:0009813: flavonoid biosynthetic process | 2.46E-02 |
| 113 | GO:0009723: response to ethylene | 2.46E-02 |
| 114 | GO:0006499: N-terminal protein myristoylation | 2.55E-02 |
| 115 | GO:0080167: response to karrikin | 2.64E-02 |
| 116 | GO:0009910: negative regulation of flower development | 2.64E-02 |
| 117 | GO:0007568: aging | 2.64E-02 |
| 118 | GO:0006865: amino acid transport | 2.72E-02 |
| 119 | GO:0006631: fatty acid metabolic process | 3.18E-02 |
| 120 | GO:0009640: photomorphogenesis | 3.37E-02 |
| 121 | GO:0009644: response to high light intensity | 3.56E-02 |
| 122 | GO:0006629: lipid metabolic process | 3.89E-02 |
| 123 | GO:0006812: cation transport | 3.96E-02 |
| 124 | GO:0009793: embryo development ending in seed dormancy | 3.99E-02 |
| 125 | GO:0009585: red, far-red light phototransduction | 4.17E-02 |
| 126 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.27E-02 |
| 127 | GO:0006857: oligopeptide transport | 4.37E-02 |
| 128 | GO:0048367: shoot system development | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 2 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 3 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 4 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 5 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 6 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 7 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 8 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 9 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 10 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 11 | GO:0036033: mediator complex binding | 0.00E+00 |
| 12 | GO:0003993: acid phosphatase activity | 2.69E-05 |
| 13 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 4.59E-05 |
| 14 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.54E-04 |
| 15 | GO:0004853: uroporphyrinogen decarboxylase activity | 1.54E-04 |
| 16 | GO:0042586: peptide deformylase activity | 1.54E-04 |
| 17 | GO:0004328: formamidase activity | 1.54E-04 |
| 18 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.54E-04 |
| 19 | GO:0004766: spermidine synthase activity | 3.51E-04 |
| 20 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.51E-04 |
| 21 | GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity | 3.51E-04 |
| 22 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.51E-04 |
| 23 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.51E-04 |
| 24 | GO:0004512: inositol-3-phosphate synthase activity | 3.51E-04 |
| 25 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 3.51E-04 |
| 26 | GO:0016630: protochlorophyllide reductase activity | 3.51E-04 |
| 27 | GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity | 3.51E-04 |
| 28 | GO:0015172: acidic amino acid transmembrane transporter activity | 3.51E-04 |
| 29 | GO:0050017: L-3-cyanoalanine synthase activity | 3.51E-04 |
| 30 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 3.51E-04 |
| 31 | GO:0050734: hydroxycinnamoyltransferase activity | 5.75E-04 |
| 32 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.75E-04 |
| 33 | GO:0005504: fatty acid binding | 5.75E-04 |
| 34 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 5.75E-04 |
| 35 | GO:0004049: anthranilate synthase activity | 5.75E-04 |
| 36 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 5.75E-04 |
| 37 | GO:0015175: neutral amino acid transmembrane transporter activity | 8.23E-04 |
| 38 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 8.23E-04 |
| 39 | GO:0016851: magnesium chelatase activity | 8.23E-04 |
| 40 | GO:0003999: adenine phosphoribosyltransferase activity | 8.23E-04 |
| 41 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 8.23E-04 |
| 42 | GO:0035198: miRNA binding | 8.23E-04 |
| 43 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.09E-03 |
| 44 | GO:0045430: chalcone isomerase activity | 1.09E-03 |
| 45 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.09E-03 |
| 46 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.09E-03 |
| 47 | GO:0016846: carbon-sulfur lyase activity | 1.38E-03 |
| 48 | GO:0004040: amidase activity | 1.38E-03 |
| 49 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.38E-03 |
| 50 | GO:0042578: phosphoric ester hydrolase activity | 1.70E-03 |
| 51 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.70E-03 |
| 52 | GO:0004124: cysteine synthase activity | 2.03E-03 |
| 53 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.03E-03 |
| 54 | GO:0009927: histidine phosphotransfer kinase activity | 2.03E-03 |
| 55 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.03E-03 |
| 56 | GO:0008236: serine-type peptidase activity | 2.42E-03 |
| 57 | GO:0004033: aldo-keto reductase (NADP) activity | 2.77E-03 |
| 58 | GO:0043022: ribosome binding | 2.77E-03 |
| 59 | GO:0042802: identical protein binding | 2.98E-03 |
| 60 | GO:0016788: hydrolase activity, acting on ester bonds | 3.92E-03 |
| 61 | GO:0047372: acylglycerol lipase activity | 4.92E-03 |
| 62 | GO:0003725: double-stranded RNA binding | 5.91E-03 |
| 63 | GO:0008081: phosphoric diester hydrolase activity | 5.91E-03 |
| 64 | GO:0031072: heat shock protein binding | 5.91E-03 |
| 65 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.42E-03 |
| 66 | GO:0005385: zinc ion transmembrane transporter activity | 8.05E-03 |
| 67 | GO:0016746: transferase activity, transferring acyl groups | 8.15E-03 |
| 68 | GO:0051087: chaperone binding | 8.63E-03 |
| 69 | GO:0008324: cation transmembrane transporter activity | 8.63E-03 |
| 70 | GO:0030570: pectate lyase activity | 1.04E-02 |
| 71 | GO:0001085: RNA polymerase II transcription factor binding | 1.31E-02 |
| 72 | GO:0008017: microtubule binding | 1.44E-02 |
| 73 | GO:0048038: quinone binding | 1.52E-02 |
| 74 | GO:0016791: phosphatase activity | 1.74E-02 |
| 75 | GO:0005200: structural constituent of cytoskeleton | 1.81E-02 |
| 76 | GO:0015250: water channel activity | 1.97E-02 |
| 77 | GO:0016740: transferase activity | 2.20E-02 |
| 78 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.64E-02 |
| 79 | GO:0050897: cobalt ion binding | 2.64E-02 |
| 80 | GO:0003746: translation elongation factor activity | 2.81E-02 |
| 81 | GO:0000149: SNARE binding | 2.99E-02 |
| 82 | GO:0004871: signal transducer activity | 3.31E-02 |
| 83 | GO:0042803: protein homodimerization activity | 3.31E-02 |
| 84 | GO:0005484: SNAP receptor activity | 3.37E-02 |
| 85 | GO:0004185: serine-type carboxypeptidase activity | 3.37E-02 |
| 86 | GO:0035091: phosphatidylinositol binding | 3.56E-02 |
| 87 | GO:0005198: structural molecule activity | 3.66E-02 |
| 88 | GO:0015293: symporter activity | 3.66E-02 |
| 89 | GO:0003777: microtubule motor activity | 4.48E-02 |
| 90 | GO:0015171: amino acid transmembrane transporter activity | 4.48E-02 |
| 91 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.80E-02 |
| 92 | GO:0005515: protein binding | 4.93E-02 |