GO Enrichment Analysis of Co-expressed Genes with
AT1G31800
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 2 | GO:0010157: response to chlorate | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 5 | GO:0010422: regulation of brassinosteroid biosynthetic process | 0.00E+00 |
| 6 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 7 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 8 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 9 | GO:0045037: protein import into chloroplast stroma | 2.57E-05 |
| 10 | GO:0042793: transcription from plastid promoter | 9.17E-05 |
| 11 | GO:0006400: tRNA modification | 1.67E-04 |
| 12 | GO:0006353: DNA-templated transcription, termination | 2.12E-04 |
| 13 | GO:0009704: de-etiolation | 2.12E-04 |
| 14 | GO:0000476: maturation of 4.5S rRNA | 2.36E-04 |
| 15 | GO:0000967: rRNA 5'-end processing | 2.36E-04 |
| 16 | GO:0043266: regulation of potassium ion transport | 2.36E-04 |
| 17 | GO:2000021: regulation of ion homeostasis | 2.36E-04 |
| 18 | GO:1902458: positive regulation of stomatal opening | 2.36E-04 |
| 19 | GO:0006177: GMP biosynthetic process | 2.36E-04 |
| 20 | GO:0006419: alanyl-tRNA aminoacylation | 2.36E-04 |
| 21 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 2.36E-04 |
| 22 | GO:0071482: cellular response to light stimulus | 2.63E-04 |
| 23 | GO:0009657: plastid organization | 2.63E-04 |
| 24 | GO:0009658: chloroplast organization | 3.20E-04 |
| 25 | GO:0006352: DNA-templated transcription, initiation | 5.11E-04 |
| 26 | GO:0042325: regulation of phosphorylation | 5.24E-04 |
| 27 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 5.24E-04 |
| 28 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 5.24E-04 |
| 29 | GO:0034470: ncRNA processing | 5.24E-04 |
| 30 | GO:0010020: chloroplast fission | 7.46E-04 |
| 31 | GO:0090351: seedling development | 8.34E-04 |
| 32 | GO:0045493: xylan catabolic process | 8.52E-04 |
| 33 | GO:0006760: folic acid-containing compound metabolic process | 8.52E-04 |
| 34 | GO:0016556: mRNA modification | 1.21E-03 |
| 35 | GO:0043572: plastid fission | 1.21E-03 |
| 36 | GO:2001141: regulation of RNA biosynthetic process | 1.21E-03 |
| 37 | GO:0010239: chloroplast mRNA processing | 1.21E-03 |
| 38 | GO:0006730: one-carbon metabolic process | 1.35E-03 |
| 39 | GO:0015846: polyamine transport | 1.62E-03 |
| 40 | GO:0046656: folic acid biosynthetic process | 1.62E-03 |
| 41 | GO:0071483: cellular response to blue light | 1.62E-03 |
| 42 | GO:0044205: 'de novo' UMP biosynthetic process | 1.62E-03 |
| 43 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.72E-03 |
| 44 | GO:0016131: brassinosteroid metabolic process | 2.07E-03 |
| 45 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.07E-03 |
| 46 | GO:0009228: thiamine biosynthetic process | 2.55E-03 |
| 47 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.55E-03 |
| 48 | GO:0010190: cytochrome b6f complex assembly | 2.55E-03 |
| 49 | GO:0016554: cytidine to uridine editing | 2.55E-03 |
| 50 | GO:0032973: amino acid export | 2.55E-03 |
| 51 | GO:1901259: chloroplast rRNA processing | 3.06E-03 |
| 52 | GO:0006458: 'de novo' protein folding | 3.06E-03 |
| 53 | GO:0017148: negative regulation of translation | 3.06E-03 |
| 54 | GO:0046654: tetrahydrofolate biosynthetic process | 3.06E-03 |
| 55 | GO:0030488: tRNA methylation | 3.06E-03 |
| 56 | GO:0080086: stamen filament development | 3.06E-03 |
| 57 | GO:0019509: L-methionine salvage from methylthioadenosine | 3.06E-03 |
| 58 | GO:0042026: protein refolding | 3.06E-03 |
| 59 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 3.61E-03 |
| 60 | GO:0015693: magnesium ion transport | 3.61E-03 |
| 61 | GO:0043090: amino acid import | 3.61E-03 |
| 62 | GO:0070413: trehalose metabolism in response to stress | 4.19E-03 |
| 63 | GO:0006875: cellular metal ion homeostasis | 4.19E-03 |
| 64 | GO:0010411: xyloglucan metabolic process | 4.19E-03 |
| 65 | GO:2000070: regulation of response to water deprivation | 4.19E-03 |
| 66 | GO:0009231: riboflavin biosynthetic process | 4.19E-03 |
| 67 | GO:0042255: ribosome assembly | 4.19E-03 |
| 68 | GO:0046620: regulation of organ growth | 4.19E-03 |
| 69 | GO:0006526: arginine biosynthetic process | 4.79E-03 |
| 70 | GO:0006002: fructose 6-phosphate metabolic process | 4.79E-03 |
| 71 | GO:0010206: photosystem II repair | 5.43E-03 |
| 72 | GO:0080144: amino acid homeostasis | 5.43E-03 |
| 73 | GO:0000373: Group II intron splicing | 5.43E-03 |
| 74 | GO:0006098: pentose-phosphate shunt | 5.43E-03 |
| 75 | GO:0045087: innate immune response | 5.87E-03 |
| 76 | GO:0042761: very long-chain fatty acid biosynthetic process | 6.09E-03 |
| 77 | GO:1900865: chloroplast RNA modification | 6.09E-03 |
| 78 | GO:0006839: mitochondrial transport | 6.69E-03 |
| 79 | GO:0045036: protein targeting to chloroplast | 6.78E-03 |
| 80 | GO:0006949: syncytium formation | 6.78E-03 |
| 81 | GO:0006415: translational termination | 7.50E-03 |
| 82 | GO:1903507: negative regulation of nucleic acid-templated transcription | 7.50E-03 |
| 83 | GO:0009684: indoleacetic acid biosynthetic process | 7.50E-03 |
| 84 | GO:0010015: root morphogenesis | 7.50E-03 |
| 85 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.25E-03 |
| 86 | GO:0006094: gluconeogenesis | 9.02E-03 |
| 87 | GO:2000012: regulation of auxin polar transport | 9.02E-03 |
| 88 | GO:0010207: photosystem II assembly | 9.82E-03 |
| 89 | GO:0071732: cellular response to nitric oxide | 1.06E-02 |
| 90 | GO:0010030: positive regulation of seed germination | 1.06E-02 |
| 91 | GO:0010025: wax biosynthetic process | 1.15E-02 |
| 92 | GO:0006096: glycolytic process | 1.21E-02 |
| 93 | GO:0005992: trehalose biosynthetic process | 1.24E-02 |
| 94 | GO:0009116: nucleoside metabolic process | 1.24E-02 |
| 95 | GO:0030150: protein import into mitochondrial matrix | 1.24E-02 |
| 96 | GO:0016575: histone deacetylation | 1.32E-02 |
| 97 | GO:0009793: embryo development ending in seed dormancy | 1.34E-02 |
| 98 | GO:0061077: chaperone-mediated protein folding | 1.42E-02 |
| 99 | GO:0009409: response to cold | 1.50E-02 |
| 100 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.51E-02 |
| 101 | GO:0007005: mitochondrion organization | 1.51E-02 |
| 102 | GO:0031348: negative regulation of defense response | 1.51E-02 |
| 103 | GO:0080092: regulation of pollen tube growth | 1.51E-02 |
| 104 | GO:0071369: cellular response to ethylene stimulus | 1.61E-02 |
| 105 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.61E-02 |
| 106 | GO:0009306: protein secretion | 1.70E-02 |
| 107 | GO:0008033: tRNA processing | 1.91E-02 |
| 108 | GO:0042631: cellular response to water deprivation | 1.91E-02 |
| 109 | GO:0009646: response to absence of light | 2.12E-02 |
| 110 | GO:0009790: embryo development | 2.14E-02 |
| 111 | GO:0016132: brassinosteroid biosynthetic process | 2.34E-02 |
| 112 | GO:0016032: viral process | 2.45E-02 |
| 113 | GO:0032502: developmental process | 2.45E-02 |
| 114 | GO:0007623: circadian rhythm | 2.53E-02 |
| 115 | GO:1901657: glycosyl compound metabolic process | 2.56E-02 |
| 116 | GO:0030163: protein catabolic process | 2.56E-02 |
| 117 | GO:0071281: cellular response to iron ion | 2.56E-02 |
| 118 | GO:0009828: plant-type cell wall loosening | 2.68E-02 |
| 119 | GO:0071805: potassium ion transmembrane transport | 2.80E-02 |
| 120 | GO:0071555: cell wall organization | 2.87E-02 |
| 121 | GO:0007166: cell surface receptor signaling pathway | 2.89E-02 |
| 122 | GO:0001666: response to hypoxia | 3.04E-02 |
| 123 | GO:0009911: positive regulation of flower development | 3.04E-02 |
| 124 | GO:0009737: response to abscisic acid | 3.22E-02 |
| 125 | GO:0006974: cellular response to DNA damage stimulus | 3.29E-02 |
| 126 | GO:0009627: systemic acquired resistance | 3.29E-02 |
| 127 | GO:0015995: chlorophyll biosynthetic process | 3.41E-02 |
| 128 | GO:0018298: protein-chromophore linkage | 3.67E-02 |
| 129 | GO:0009813: flavonoid biosynthetic process | 3.80E-02 |
| 130 | GO:0055114: oxidation-reduction process | 4.30E-02 |
| 131 | GO:0009637: response to blue light | 4.34E-02 |
| 132 | GO:0009853: photorespiration | 4.34E-02 |
| 133 | GO:0045893: positive regulation of transcription, DNA-templated | 4.34E-02 |
| 134 | GO:0080167: response to karrikin | 4.82E-02 |
| 135 | GO:0006631: fatty acid metabolic process | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 3 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 4 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 5 | GO:0019808: polyamine binding | 0.00E+00 |
| 6 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 7 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 8 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 9 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 10 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 11 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 12 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 2.61E-06 |
| 13 | GO:0016851: magnesium chelatase activity | 2.15E-05 |
| 14 | GO:0001053: plastid sigma factor activity | 3.91E-05 |
| 15 | GO:0016987: sigma factor activity | 3.91E-05 |
| 16 | GO:0004040: amidase activity | 6.26E-05 |
| 17 | GO:0043621: protein self-association | 1.43E-04 |
| 18 | GO:0015088: copper uptake transmembrane transporter activity | 2.36E-04 |
| 19 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.36E-04 |
| 20 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.36E-04 |
| 21 | GO:0004813: alanine-tRNA ligase activity | 2.36E-04 |
| 22 | GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity | 2.36E-04 |
| 23 | GO:0003723: RNA binding | 2.75E-04 |
| 24 | GO:0004150: dihydroneopterin aldolase activity | 5.24E-04 |
| 25 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 5.24E-04 |
| 26 | GO:0003938: IMP dehydrogenase activity | 5.24E-04 |
| 27 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 5.24E-04 |
| 28 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.24E-04 |
| 29 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 6.81E-04 |
| 30 | GO:0052692: raffinose alpha-galactosidase activity | 8.52E-04 |
| 31 | GO:0070330: aromatase activity | 8.52E-04 |
| 32 | GO:0003913: DNA photolyase activity | 8.52E-04 |
| 33 | GO:0004557: alpha-galactosidase activity | 8.52E-04 |
| 34 | GO:0048487: beta-tubulin binding | 1.21E-03 |
| 35 | GO:0043023: ribosomal large subunit binding | 1.21E-03 |
| 36 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.62E-03 |
| 37 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.62E-03 |
| 38 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.62E-03 |
| 39 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.62E-03 |
| 40 | GO:0018685: alkane 1-monooxygenase activity | 2.07E-03 |
| 41 | GO:0004332: fructose-bisphosphate aldolase activity | 2.55E-03 |
| 42 | GO:0003730: mRNA 3'-UTR binding | 3.06E-03 |
| 43 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.06E-03 |
| 44 | GO:0042803: protein homodimerization activity | 3.27E-03 |
| 45 | GO:0009881: photoreceptor activity | 3.61E-03 |
| 46 | GO:0003872: 6-phosphofructokinase activity | 3.61E-03 |
| 47 | GO:0043022: ribosome binding | 4.19E-03 |
| 48 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.64E-03 |
| 49 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 4.79E-03 |
| 50 | GO:0003747: translation release factor activity | 5.43E-03 |
| 51 | GO:0005381: iron ion transmembrane transporter activity | 6.09E-03 |
| 52 | GO:0005525: GTP binding | 6.17E-03 |
| 53 | GO:0004805: trehalose-phosphatase activity | 6.78E-03 |
| 54 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.50E-03 |
| 55 | GO:0044183: protein binding involved in protein folding | 7.50E-03 |
| 56 | GO:0000049: tRNA binding | 8.25E-03 |
| 57 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.02E-03 |
| 58 | GO:0015095: magnesium ion transmembrane transporter activity | 9.02E-03 |
| 59 | GO:0019888: protein phosphatase regulator activity | 9.02E-03 |
| 60 | GO:0015266: protein channel activity | 9.02E-03 |
| 61 | GO:0008266: poly(U) RNA binding | 9.82E-03 |
| 62 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.02E-02 |
| 63 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.15E-02 |
| 64 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.15E-02 |
| 65 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.15E-02 |
| 66 | GO:0051536: iron-sulfur cluster binding | 1.24E-02 |
| 67 | GO:0004407: histone deacetylase activity | 1.24E-02 |
| 68 | GO:0005528: FK506 binding | 1.24E-02 |
| 69 | GO:0003714: transcription corepressor activity | 1.24E-02 |
| 70 | GO:0015079: potassium ion transmembrane transporter activity | 1.32E-02 |
| 71 | GO:0004176: ATP-dependent peptidase activity | 1.42E-02 |
| 72 | GO:0016491: oxidoreductase activity | 1.43E-02 |
| 73 | GO:0051082: unfolded protein binding | 1.46E-02 |
| 74 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.52E-02 |
| 75 | GO:0003727: single-stranded RNA binding | 1.70E-02 |
| 76 | GO:0019843: rRNA binding | 1.83E-02 |
| 77 | GO:0008536: Ran GTPase binding | 2.01E-02 |
| 78 | GO:0004252: serine-type endopeptidase activity | 2.03E-02 |
| 79 | GO:0050662: coenzyme binding | 2.12E-02 |
| 80 | GO:0016853: isomerase activity | 2.12E-02 |
| 81 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.34E-02 |
| 82 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.36E-02 |
| 83 | GO:0016791: phosphatase activity | 2.68E-02 |
| 84 | GO:0008237: metallopeptidase activity | 2.80E-02 |
| 85 | GO:0016597: amino acid binding | 2.92E-02 |
| 86 | GO:0004721: phosphoprotein phosphatase activity | 3.41E-02 |
| 87 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.41E-02 |
| 88 | GO:0102483: scopolin beta-glucosidase activity | 3.41E-02 |
| 89 | GO:0008236: serine-type peptidase activity | 3.54E-02 |
| 90 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 4.34E-02 |
| 91 | GO:0050660: flavin adenine dinucleotide binding | 4.51E-02 |
| 92 | GO:0008422: beta-glucosidase activity | 4.62E-02 |
| 93 | GO:0016740: transferase activity | 4.68E-02 |
| 94 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.76E-02 |