Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G31410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010157: response to chlorate0.00E+00
2GO:0006399: tRNA metabolic process0.00E+00
3GO:0015843: methylammonium transport0.00E+00
4GO:0043488: regulation of mRNA stability0.00E+00
5GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
6GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
7GO:0090071: negative regulation of ribosome biogenesis0.00E+00
8GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
9GO:0031116: positive regulation of microtubule polymerization0.00E+00
10GO:0019447: D-cysteine catabolic process0.00E+00
11GO:0031129: inductive cell-cell signaling0.00E+00
12GO:0045037: protein import into chloroplast stroma9.33E-07
13GO:0009658: chloroplast organization9.45E-07
14GO:0006164: purine nucleotide biosynthetic process3.12E-05
15GO:0010020: chloroplast fission6.23E-05
16GO:0042793: transcription from plastid promoter1.29E-04
17GO:0009099: valine biosynthetic process1.76E-04
18GO:0009903: chloroplast avoidance movement1.76E-04
19GO:0009082: branched-chain amino acid biosynthetic process1.76E-04
20GO:0006400: tRNA modification2.30E-04
21GO:0009704: de-etiolation2.91E-04
22GO:0046620: regulation of organ growth2.91E-04
23GO:0010480: microsporocyte differentiation2.92E-04
24GO:2000021: regulation of ion homeostasis2.92E-04
25GO:1902458: positive regulation of stomatal opening2.92E-04
26GO:0050801: ion homeostasis2.92E-04
27GO:0006177: GMP biosynthetic process2.92E-04
28GO:0006419: alanyl-tRNA aminoacylation2.92E-04
29GO:0010482: regulation of epidermal cell division2.92E-04
30GO:1902265: abscisic acid homeostasis2.92E-04
31GO:0071028: nuclear mRNA surveillance2.92E-04
32GO:0043266: regulation of potassium ion transport2.92E-04
33GO:0071482: cellular response to light stimulus3.57E-04
34GO:0009097: isoleucine biosynthetic process3.57E-04
35GO:1900865: chloroplast RNA modification5.10E-04
36GO:0042814: monopolar cell growth6.40E-04
37GO:0009220: pyrimidine ribonucleotide biosynthetic process6.40E-04
38GO:0042550: photosystem I stabilization6.40E-04
39GO:0031125: rRNA 3'-end processing6.40E-04
40GO:1903426: regulation of reactive oxygen species biosynthetic process6.40E-04
41GO:0071051: polyadenylation-dependent snoRNA 3'-end processing6.40E-04
42GO:0034475: U4 snRNA 3'-end processing6.40E-04
43GO:0080005: photosystem stoichiometry adjustment6.40E-04
44GO:2000039: regulation of trichome morphogenesis6.40E-04
45GO:1900871: chloroplast mRNA modification6.40E-04
46GO:0007154: cell communication6.40E-04
47GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation6.40E-04
48GO:0006352: DNA-templated transcription, initiation6.86E-04
49GO:0001578: microtubule bundle formation1.04E-03
50GO:0045493: xylan catabolic process1.04E-03
51GO:0006760: folic acid-containing compound metabolic process1.04E-03
52GO:0010447: response to acidic pH1.04E-03
53GO:0016075: rRNA catabolic process1.04E-03
54GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'1.04E-03
55GO:0031022: nuclear migration along microfilament1.04E-03
56GO:0051127: positive regulation of actin nucleation1.04E-03
57GO:0045604: regulation of epidermal cell differentiation1.04E-03
58GO:0090351: seedling development1.11E-03
59GO:0009637: response to blue light1.12E-03
60GO:0005992: trehalose biosynthetic process1.37E-03
61GO:0043572: plastid fission1.48E-03
62GO:2001141: regulation of RNA biosynthetic process1.48E-03
63GO:0051639: actin filament network formation1.48E-03
64GO:0044211: CTP salvage1.48E-03
65GO:0015696: ammonium transport1.48E-03
66GO:0048530: fruit morphogenesis1.48E-03
67GO:0046739: transport of virus in multicellular host1.48E-03
68GO:2000904: regulation of starch metabolic process1.48E-03
69GO:0016556: mRNA modification1.48E-03
70GO:0071483: cellular response to blue light1.99E-03
71GO:0044205: 'de novo' UMP biosynthetic process1.99E-03
72GO:0009902: chloroplast relocation1.99E-03
73GO:0009165: nucleotide biosynthetic process1.99E-03
74GO:0051764: actin crosslink formation1.99E-03
75GO:0051322: anaphase1.99E-03
76GO:0072488: ammonium transmembrane transport1.99E-03
77GO:0046656: folic acid biosynthetic process1.99E-03
78GO:0007020: microtubule nucleation1.99E-03
79GO:0044206: UMP salvage1.99E-03
80GO:0010091: trichome branching2.15E-03
81GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.32E-03
82GO:0009904: chloroplast accumulation movement2.54E-03
83GO:0045038: protein import into chloroplast thylakoid membrane2.54E-03
84GO:0016123: xanthophyll biosynthetic process2.54E-03
85GO:0010158: abaxial cell fate specification2.54E-03
86GO:0016131: brassinosteroid metabolic process2.54E-03
87GO:0046785: microtubule polymerization2.54E-03
88GO:0009734: auxin-activated signaling pathway2.95E-03
89GO:0009635: response to herbicide3.14E-03
90GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.14E-03
91GO:0006655: phosphatidylglycerol biosynthetic process3.14E-03
92GO:0016554: cytidine to uridine editing3.14E-03
93GO:0006139: nucleobase-containing compound metabolic process3.14E-03
94GO:0006206: pyrimidine nucleobase metabolic process3.14E-03
95GO:0009228: thiamine biosynthetic process3.14E-03
96GO:0046654: tetrahydrofolate biosynthetic process3.77E-03
97GO:0030488: tRNA methylation3.77E-03
98GO:0048444: floral organ morphogenesis3.77E-03
99GO:0080086: stamen filament development3.77E-03
100GO:2000067: regulation of root morphogenesis3.77E-03
101GO:0042372: phylloquinone biosynthetic process3.77E-03
102GO:0017148: negative regulation of translation3.77E-03
103GO:0009828: plant-type cell wall loosening4.04E-03
104GO:0048528: post-embryonic root development4.45E-03
105GO:0010050: vegetative phase change4.45E-03
106GO:0048437: floral organ development4.45E-03
107GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process4.45E-03
108GO:2000070: regulation of response to water deprivation5.17E-03
109GO:0009231: riboflavin biosynthetic process5.17E-03
110GO:0009787: regulation of abscisic acid-activated signaling pathway5.17E-03
111GO:0009850: auxin metabolic process5.17E-03
112GO:0042255: ribosome assembly5.17E-03
113GO:0006353: DNA-templated transcription, termination5.17E-03
114GO:0070413: trehalose metabolism in response to stress5.17E-03
115GO:0019375: galactolipid biosynthetic process5.17E-03
116GO:0006875: cellular metal ion homeostasis5.17E-03
117GO:0010411: xyloglucan metabolic process5.68E-03
118GO:0006002: fructose 6-phosphate metabolic process5.92E-03
119GO:0010497: plasmodesmata-mediated intercellular transport5.92E-03
120GO:0009657: plastid organization5.92E-03
121GO:0009733: response to auxin6.01E-03
122GO:0000373: Group II intron splicing6.71E-03
123GO:0006189: 'de novo' IMP biosynthetic process6.71E-03
124GO:0010206: photosystem II repair6.71E-03
125GO:0009098: leucine biosynthetic process7.54E-03
126GO:0042761: very long-chain fatty acid biosynthetic process7.54E-03
127GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.54E-03
128GO:0045036: protein targeting to chloroplast8.40E-03
129GO:0006949: syncytium formation8.40E-03
130GO:0055114: oxidation-reduction process8.79E-03
131GO:0009793: embryo development ending in seed dormancy9.03E-03
132GO:0006839: mitochondrial transport9.10E-03
133GO:0048229: gametophyte development9.30E-03
134GO:0010015: root morphogenesis9.30E-03
135GO:0006415: translational termination9.30E-03
136GO:1903507: negative regulation of nucleic acid-templated transcription9.30E-03
137GO:0016024: CDP-diacylglycerol biosynthetic process1.02E-02
138GO:0010582: floral meristem determinacy1.02E-02
139GO:0009926: auxin polar transport1.03E-02
140GO:0030036: actin cytoskeleton organization1.12E-02
141GO:0050826: response to freezing1.12E-02
142GO:0010075: regulation of meristem growth1.12E-02
143GO:0030048: actin filament-based movement1.12E-02
144GO:0009934: regulation of meristem structural organization1.22E-02
145GO:0010030: positive regulation of seed germination1.32E-02
146GO:0010039: response to iron ion1.32E-02
147GO:0010025: wax biosynthetic process1.43E-02
148GO:0051017: actin filament bundle assembly1.54E-02
149GO:0009116: nucleoside metabolic process1.54E-02
150GO:0007010: cytoskeleton organization1.54E-02
151GO:0008299: isoprenoid biosynthetic process1.65E-02
152GO:0043622: cortical microtubule organization1.65E-02
153GO:0031408: oxylipin biosynthetic process1.76E-02
154GO:0031348: negative regulation of defense response1.88E-02
155GO:0080092: regulation of pollen tube growth1.88E-02
156GO:2000022: regulation of jasmonic acid mediated signaling pathway1.88E-02
157GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.00E-02
158GO:0009693: ethylene biosynthetic process2.00E-02
159GO:0010082: regulation of root meristem growth2.00E-02
160GO:0009306: protein secretion2.12E-02
161GO:0016117: carotenoid biosynthetic process2.25E-02
162GO:0008033: tRNA processing2.37E-02
163GO:0048653: anther development2.37E-02
164GO:0042631: cellular response to water deprivation2.37E-02
165GO:0000226: microtubule cytoskeleton organization2.37E-02
166GO:0008360: regulation of cell shape2.50E-02
167GO:0009646: response to absence of light2.64E-02
168GO:0055072: iron ion homeostasis2.77E-02
169GO:0016132: brassinosteroid biosynthetic process2.91E-02
170GO:0032502: developmental process3.05E-02
171GO:0010583: response to cyclopentenone3.05E-02
172GO:0016032: viral process3.05E-02
173GO:0030163: protein catabolic process3.19E-02
174GO:0006413: translational initiation3.20E-02
175GO:0006464: cellular protein modification process3.34E-02
176GO:0007623: circadian rhythm3.43E-02
177GO:0071805: potassium ion transmembrane transport3.48E-02
178GO:0000910: cytokinesis3.63E-02
179GO:0016126: sterol biosynthetic process3.78E-02
180GO:0007166: cell surface receptor signaling pathway3.92E-02
181GO:0010029: regulation of seed germination3.93E-02
182GO:0009627: systemic acquired resistance4.09E-02
183GO:0006974: cellular response to DNA damage stimulus4.09E-02
184GO:0071555: cell wall organization4.49E-02
185GO:0009813: flavonoid biosynthetic process4.73E-02
186GO:0006468: protein phosphorylation4.99E-02
RankGO TermAdjusted P value
1GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
2GO:0004056: argininosuccinate lyase activity0.00E+00
3GO:0019136: deoxynucleoside kinase activity0.00E+00
4GO:0003937: IMP cyclohydrolase activity0.00E+00
5GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
6GO:0008660: 1-aminocyclopropane-1-carboxylate deaminase activity0.00E+00
7GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity0.00E+00
8GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
9GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
10GO:0019148: D-cysteine desulfhydrase activity0.00E+00
11GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
12GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
13GO:0001053: plastid sigma factor activity5.61E-05
14GO:0016987: sigma factor activity5.61E-05
15GO:0016773: phosphotransferase activity, alcohol group as acceptor8.85E-05
16GO:0043022: ribosome binding2.91E-04
17GO:0015088: copper uptake transmembrane transporter activity2.92E-04
18GO:0046481: digalactosyldiacylglycerol synthase activity2.92E-04
19GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity2.92E-04
20GO:0050139: nicotinate-N-glucosyltransferase activity2.92E-04
21GO:0046480: galactolipid galactosyltransferase activity2.92E-04
22GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity2.92E-04
23GO:0004813: alanine-tRNA ligase activity2.92E-04
24GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity2.92E-04
25GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity2.92E-04
26GO:0003984: acetolactate synthase activity2.92E-04
27GO:0004805: trehalose-phosphatase activity5.95E-04
28GO:0010291: carotene beta-ring hydroxylase activity6.40E-04
29GO:0017118: lipoyltransferase activity6.40E-04
30GO:0009977: proton motive force dependent protein transmembrane transporter activity6.40E-04
31GO:0003938: IMP dehydrogenase activity6.40E-04
32GO:0102083: 7,8-dihydromonapterin aldolase activity6.40E-04
33GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity6.40E-04
34GO:0004150: dihydroneopterin aldolase activity6.40E-04
35GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding6.40E-04
36GO:0016614: oxidoreductase activity, acting on CH-OH group of donors9.96E-04
37GO:0046524: sucrose-phosphate synthase activity1.04E-03
38GO:0070330: aromatase activity1.04E-03
39GO:0042803: protein homodimerization activity1.21E-03
40GO:0052656: L-isoleucine transaminase activity1.48E-03
41GO:0043023: ribosomal large subunit binding1.48E-03
42GO:0052654: L-leucine transaminase activity1.48E-03
43GO:0052655: L-valine transaminase activity1.48E-03
44GO:0000254: C-4 methylsterol oxidase activity1.48E-03
45GO:0035250: UDP-galactosyltransferase activity1.48E-03
46GO:0043621: protein self-association1.69E-03
47GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity1.99E-03
48GO:0046556: alpha-L-arabinofuranosidase activity1.99E-03
49GO:0004845: uracil phosphoribosyltransferase activity1.99E-03
50GO:0004737: pyruvate decarboxylase activity1.99E-03
51GO:0004084: branched-chain-amino-acid transaminase activity1.99E-03
52GO:0009044: xylan 1,4-beta-xylosidase activity1.99E-03
53GO:0004040: amidase activity2.54E-03
54GO:0018685: alkane 1-monooxygenase activity2.54E-03
55GO:0008519: ammonium transmembrane transporter activity3.14E-03
56GO:0030976: thiamine pyrophosphate binding3.14E-03
57GO:0016208: AMP binding3.14E-03
58GO:0042578: phosphoric ester hydrolase activity3.14E-03
59GO:0005525: GTP binding3.18E-03
60GO:0004723: calcium-dependent protein serine/threonine phosphatase activity3.77E-03
61GO:0008195: phosphatidate phosphatase activity3.77E-03
62GO:0016832: aldehyde-lyase activity3.77E-03
63GO:0004849: uridine kinase activity3.77E-03
64GO:0003730: mRNA 3'-UTR binding3.77E-03
65GO:0003872: 6-phosphofructokinase activity4.45E-03
66GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.44E-03
67GO:0003747: translation release factor activity6.71E-03
68GO:0005381: iron ion transmembrane transporter activity7.54E-03
69GO:0051539: 4 iron, 4 sulfur cluster binding9.10E-03
70GO:0005089: Rho guanyl-nucleotide exchange factor activity9.30E-03
71GO:0000976: transcription regulatory region sequence-specific DNA binding1.02E-02
72GO:0000049: tRNA binding1.02E-02
73GO:0003723: RNA binding1.08E-02
74GO:0000175: 3'-5'-exoribonuclease activity1.12E-02
75GO:0004022: alcohol dehydrogenase (NAD) activity1.12E-02
76GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.22E-02
77GO:0005515: protein binding1.37E-02
78GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.39E-02
79GO:0050660: flavin adenine dinucleotide binding1.48E-02
80GO:0051536: iron-sulfur cluster binding1.54E-02
81GO:0005528: FK506 binding1.54E-02
82GO:0003714: transcription corepressor activity1.54E-02
83GO:0015079: potassium ion transmembrane transporter activity1.65E-02
84GO:0019706: protein-cysteine S-palmitoyltransferase activity1.76E-02
85GO:0008408: 3'-5' exonuclease activity1.76E-02
86GO:0033612: receptor serine/threonine kinase binding1.76E-02
87GO:0003727: single-stranded RNA binding2.12E-02
88GO:0016491: oxidoreductase activity2.41E-02
89GO:0008536: Ran GTPase binding2.50E-02
90GO:0003924: GTPase activity2.64E-02
91GO:0050662: coenzyme binding2.64E-02
92GO:0010181: FMN binding2.64E-02
93GO:0004252: serine-type endopeptidase activity2.76E-02
94GO:0016762: xyloglucan:xyloglucosyl transferase activity2.91E-02
95GO:0008565: protein transporter activity2.98E-02
96GO:0051015: actin filament binding3.19E-02
97GO:0016791: phosphatase activity3.34E-02
98GO:0008017: microtubule binding3.59E-02
99GO:0016597: amino acid binding3.63E-02
100GO:0003743: translation initiation factor activity4.01E-02
101GO:0016798: hydrolase activity, acting on glycosyl bonds4.25E-02
102GO:0004721: phosphoprotein phosphatase activity4.25E-02
103GO:0030247: polysaccharide binding4.25E-02
104GO:0042802: identical protein binding4.35E-02
105GO:0005506: iron ion binding4.39E-02
106GO:0008236: serine-type peptidase activity4.41E-02
107GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.57E-02
108GO:0015238: drug transmembrane transporter activity4.73E-02
109GO:0016757: transferase activity, transferring glycosyl groups4.88E-02
<
Gene type



Gene DE type