Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G31160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002184: cytoplasmic translational termination0.00E+00
2GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
3GO:0090470: shoot organ boundary specification0.00E+00
4GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
5GO:0042821: pyridoxal biosynthetic process0.00E+00
6GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
7GO:0006114: glycerol biosynthetic process0.00E+00
8GO:0018023: peptidyl-lysine trimethylation0.00E+00
9GO:0090279: regulation of calcium ion import0.00E+00
10GO:0042820: vitamin B6 catabolic process0.00E+00
11GO:0071474: cellular hyperosmotic response0.00E+00
12GO:0015995: chlorophyll biosynthetic process1.22E-10
13GO:0006783: heme biosynthetic process1.63E-05
14GO:0006782: protoporphyrinogen IX biosynthetic process2.87E-05
15GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.35E-05
16GO:0010207: photosystem II assembly6.83E-05
17GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.37E-04
18GO:0055114: oxidation-reduction process1.45E-04
19GO:0015979: photosynthesis2.47E-04
20GO:0009443: pyridoxal 5'-phosphate salvage3.04E-04
21GO:0043953: protein transport by the Tat complex3.04E-04
22GO:1902478: negative regulation of defense response to bacterium, incompatible interaction3.04E-04
23GO:0015671: oxygen transport3.04E-04
24GO:0065002: intracellular protein transmembrane transport3.04E-04
25GO:0048363: mucilage pectin metabolic process3.04E-04
26GO:0048564: photosystem I assembly3.09E-04
27GO:0071482: cellular response to light stimulus3.80E-04
28GO:0006779: porphyrin-containing compound biosynthetic process5.40E-04
29GO:0010027: thylakoid membrane organization6.42E-04
30GO:0010198: synergid death6.66E-04
31GO:0006435: threonyl-tRNA aminoacylation6.66E-04
32GO:1900871: chloroplast mRNA modification6.66E-04
33GO:0018026: peptidyl-lysine monomethylation6.66E-04
34GO:0000256: allantoin catabolic process6.66E-04
35GO:0071668: plant-type cell wall assembly6.66E-04
36GO:0080183: response to photooxidative stress6.66E-04
37GO:0051262: protein tetramerization6.66E-04
38GO:0010275: NAD(P)H dehydrogenase complex assembly6.66E-04
39GO:0009773: photosynthetic electron transport in photosystem I7.28E-04
40GO:0009089: lysine biosynthetic process via diaminopimelate7.28E-04
41GO:0009817: defense response to fungus, incompatible interaction8.97E-04
42GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.08E-03
43GO:0010136: ureide catabolic process1.08E-03
44GO:0034051: negative regulation of plant-type hypersensitive response1.08E-03
45GO:0015940: pantothenate biosynthetic process1.08E-03
46GO:0005977: glycogen metabolic process1.08E-03
47GO:0009152: purine ribonucleotide biosynthetic process1.55E-03
48GO:0046653: tetrahydrofolate metabolic process1.55E-03
49GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.55E-03
50GO:0006145: purine nucleobase catabolic process1.55E-03
51GO:0009052: pentose-phosphate shunt, non-oxidative branch1.55E-03
52GO:0033014: tetrapyrrole biosynthetic process1.55E-03
53GO:0006424: glutamyl-tRNA aminoacylation1.55E-03
54GO:1901332: negative regulation of lateral root development1.55E-03
55GO:0006986: response to unfolded protein1.55E-03
56GO:2001141: regulation of RNA biosynthetic process1.55E-03
57GO:0010371: regulation of gibberellin biosynthetic process1.55E-03
58GO:0009102: biotin biosynthetic process1.55E-03
59GO:0051085: chaperone mediated protein folding requiring cofactor1.55E-03
60GO:0048511: rhythmic process1.76E-03
61GO:0009765: photosynthesis, light harvesting2.07E-03
62GO:0010021: amylopectin biosynthetic process2.07E-03
63GO:0000304: response to singlet oxygen2.65E-03
64GO:0080110: sporopollenin biosynthetic process2.65E-03
65GO:0016120: carotene biosynthetic process2.65E-03
66GO:0046907: intracellular transport2.65E-03
67GO:0032543: mitochondrial translation2.65E-03
68GO:0045038: protein import into chloroplast thylakoid membrane2.65E-03
69GO:0016123: xanthophyll biosynthetic process2.65E-03
70GO:0006655: phosphatidylglycerol biosynthetic process3.27E-03
71GO:0010190: cytochrome b6f complex assembly3.27E-03
72GO:0030488: tRNA methylation3.93E-03
73GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.64E-03
74GO:0000105: histidine biosynthetic process5.39E-03
75GO:0022900: electron transport chain6.18E-03
76GO:0006526: arginine biosynthetic process6.18E-03
77GO:0032544: plastid translation6.18E-03
78GO:0017004: cytochrome complex assembly6.18E-03
79GO:0006633: fatty acid biosynthetic process6.75E-03
80GO:0019432: triglyceride biosynthetic process7.01E-03
81GO:0010206: photosystem II repair7.01E-03
82GO:0007568: aging7.74E-03
83GO:0048354: mucilage biosynthetic process involved in seed coat development7.87E-03
84GO:0006535: cysteine biosynthetic process from serine8.77E-03
85GO:0019684: photosynthesis, light reaction9.71E-03
86GO:0008285: negative regulation of cell proliferation9.71E-03
87GO:0006352: DNA-templated transcription, initiation9.71E-03
88GO:0006631: fatty acid metabolic process1.01E-02
89GO:0005983: starch catabolic process1.07E-02
90GO:0016024: CDP-diacylglycerol biosynthetic process1.07E-02
91GO:0009725: response to hormone1.17E-02
92GO:0005975: carbohydrate metabolic process1.22E-02
93GO:0009266: response to temperature stimulus1.27E-02
94GO:0009658: chloroplast organization1.33E-02
95GO:0000162: tryptophan biosynthetic process1.49E-02
96GO:0006636: unsaturated fatty acid biosynthetic process1.49E-02
97GO:0019762: glucosinolate catabolic process1.49E-02
98GO:0009735: response to cytokinin1.53E-02
99GO:0006289: nucleotide-excision repair1.60E-02
100GO:0019344: cysteine biosynthetic process1.60E-02
101GO:0007017: microtubule-based process1.72E-02
102GO:0010073: meristem maintenance1.72E-02
103GO:0061077: chaperone-mediated protein folding1.84E-02
104GO:0031408: oxylipin biosynthetic process1.84E-02
105GO:0016114: terpenoid biosynthetic process1.84E-02
106GO:0035428: hexose transmembrane transport1.96E-02
107GO:0016226: iron-sulfur cluster assembly1.96E-02
108GO:0080092: regulation of pollen tube growth1.96E-02
109GO:0019748: secondary metabolic process1.96E-02
110GO:0009625: response to insect2.09E-02
111GO:0010227: floral organ abscission2.09E-02
112GO:0010584: pollen exine formation2.22E-02
113GO:0051028: mRNA transport2.35E-02
114GO:0016117: carotenoid biosynthetic process2.35E-02
115GO:0000271: polysaccharide biosynthetic process2.48E-02
116GO:0015031: protein transport2.52E-02
117GO:0006457: protein folding2.56E-02
118GO:0045489: pectin biosynthetic process2.62E-02
119GO:0006520: cellular amino acid metabolic process2.62E-02
120GO:0046323: glucose import2.62E-02
121GO:0042752: regulation of circadian rhythm2.76E-02
122GO:0019252: starch biosynthetic process2.90E-02
123GO:0042744: hydrogen peroxide catabolic process3.01E-02
124GO:0000302: response to reactive oxygen species3.04E-02
125GO:0006810: transport3.21E-02
126GO:0006413: translational initiation3.40E-02
127GO:0009567: double fertilization forming a zygote and endosperm3.49E-02
128GO:0010286: heat acclimation3.64E-02
129GO:0009451: RNA modification3.73E-02
130GO:0010228: vegetative to reproductive phase transition of meristem3.82E-02
131GO:0016126: sterol biosynthetic process3.95E-02
132GO:0016311: dephosphorylation4.60E-02
133GO:0009813: flavonoid biosynthetic process4.94E-02
134GO:0010311: lateral root formation4.94E-02
RankGO TermAdjusted P value
1GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
2GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
3GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
4GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
5GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
6GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
7GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
8GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
9GO:0045435: lycopene epsilon cyclase activity0.00E+00
10GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
11GO:0050613: delta14-sterol reductase activity0.00E+00
12GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
13GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
14GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
15GO:0005048: signal sequence binding0.00E+00
16GO:0004076: biotin synthase activity0.00E+00
17GO:0043136: glycerol-3-phosphatase activity0.00E+00
18GO:0000121: glycerol-1-phosphatase activity0.00E+00
19GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.84E-06
20GO:0005528: FK506 binding4.14E-06
21GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase4.22E-06
22GO:0030267: glyoxylate reductase (NADP) activity1.50E-05
23GO:0070402: NADPH binding1.50E-05
24GO:0016851: magnesium chelatase activity3.35E-05
25GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor6.01E-05
26GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.88E-04
27GO:0016491: oxidoreductase activity2.97E-04
28GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.04E-04
29GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.04E-04
30GO:0050308: sugar-phosphatase activity3.04E-04
31GO:0004325: ferrochelatase activity3.04E-04
32GO:0004856: xylulokinase activity3.04E-04
33GO:0019203: carbohydrate phosphatase activity3.04E-04
34GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.04E-04
35GO:0016784: 3-mercaptopyruvate sulfurtransferase activity3.04E-04
36GO:0005344: oxygen transporter activity3.04E-04
37GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.04E-04
38GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity3.04E-04
39GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.04E-04
40GO:0005227: calcium activated cation channel activity3.04E-04
41GO:0004033: aldo-keto reductase (NADP) activity3.09E-04
42GO:0048038: quinone binding3.99E-04
43GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity6.66E-04
44GO:0016630: protochlorophyllide reductase activity6.66E-04
45GO:0004829: threonine-tRNA ligase activity6.66E-04
46GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity6.66E-04
47GO:0019156: isoamylase activity6.66E-04
48GO:0050017: L-3-cyanoalanine synthase activity6.66E-04
49GO:0042389: omega-3 fatty acid desaturase activity6.66E-04
50GO:0009977: proton motive force dependent protein transmembrane transporter activity6.66E-04
51GO:0008266: poly(U) RNA binding1.06E-03
52GO:0005504: fatty acid binding1.08E-03
53GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.08E-03
54GO:0004751: ribose-5-phosphate isomerase activity1.08E-03
55GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.08E-03
56GO:0008864: formyltetrahydrofolate deformylase activity1.08E-03
57GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.08E-03
58GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.55E-03
59GO:0004792: thiosulfate sulfurtransferase activity1.55E-03
60GO:0043023: ribosomal large subunit binding1.55E-03
61GO:0051087: chaperone binding1.60E-03
62GO:0004045: aminoacyl-tRNA hydrolase activity2.07E-03
63GO:0016987: sigma factor activity2.07E-03
64GO:0070628: proteasome binding2.07E-03
65GO:0045430: chalcone isomerase activity2.07E-03
66GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity2.07E-03
67GO:0016279: protein-lysine N-methyltransferase activity2.07E-03
68GO:0001053: plastid sigma factor activity2.07E-03
69GO:0005319: lipid transporter activity2.07E-03
70GO:0008374: O-acyltransferase activity2.65E-03
71GO:0016773: phosphotransferase activity, alcohol group as acceptor2.65E-03
72GO:0003959: NADPH dehydrogenase activity2.65E-03
73GO:0004601: peroxidase activity2.92E-03
74GO:0004130: cytochrome-c peroxidase activity3.27E-03
75GO:0031593: polyubiquitin binding3.27E-03
76GO:0004366: glycerol-3-phosphate O-acyltransferase activity3.27E-03
77GO:0004556: alpha-amylase activity3.27E-03
78GO:2001070: starch binding3.27E-03
79GO:0005261: cation channel activity3.93E-03
80GO:0004124: cysteine synthase activity3.93E-03
81GO:0051920: peroxiredoxin activity3.93E-03
82GO:0019843: rRNA binding5.05E-03
83GO:0008312: 7S RNA binding5.39E-03
84GO:0016209: antioxidant activity5.39E-03
85GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water6.18E-03
86GO:0008173: RNA methyltransferase activity6.18E-03
87GO:0071949: FAD binding7.01E-03
88GO:0008138: protein tyrosine/serine/threonine phosphatase activity7.01E-03
89GO:0003746: translation elongation factor activity8.49E-03
90GO:0005089: Rho guanyl-nucleotide exchange factor activity9.71E-03
91GO:0004565: beta-galactosidase activity1.17E-02
92GO:0031072: heat shock protein binding1.17E-02
93GO:0051537: 2 iron, 2 sulfur cluster binding1.19E-02
94GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.27E-02
95GO:0051287: NAD binding1.33E-02
96GO:0043130: ubiquitin binding1.60E-02
97GO:0051536: iron-sulfur cluster binding1.60E-02
98GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.96E-02
99GO:0051082: unfolded protein binding2.11E-02
100GO:0003756: protein disulfide isomerase activity2.22E-02
101GO:0016787: hydrolase activity2.35E-02
102GO:0008080: N-acetyltransferase activity2.62E-02
103GO:0005355: glucose transmembrane transporter activity2.76E-02
104GO:0050662: coenzyme binding2.76E-02
105GO:0004872: receptor activity2.90E-02
106GO:0004252: serine-type endopeptidase activity2.94E-02
107GO:0030170: pyridoxal phosphate binding2.94E-02
108GO:0009055: electron carrier activity3.11E-02
109GO:0003684: damaged DNA binding3.49E-02
110GO:0008483: transaminase activity3.64E-02
111GO:0005200: structural constituent of cytoskeleton3.64E-02
112GO:0003743: translation initiation factor activity4.26E-02
113GO:0005509: calcium ion binding4.37E-02
114GO:0004721: phosphoprotein phosphatase activity4.44E-02
115GO:0008236: serine-type peptidase activity4.60E-02
116GO:0016887: ATPase activity4.88E-02
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Gene type



Gene DE type