GO Enrichment Analysis of Co-expressed Genes with
AT1G29910
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 3 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 4 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 5 | GO:0008618: 7-methylguanosine metabolic process | 0.00E+00 |
| 6 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 7 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 8 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 9 | GO:0034337: RNA folding | 0.00E+00 |
| 10 | GO:0036265: RNA (guanine-N7)-methylation | 0.00E+00 |
| 11 | GO:0006982: response to lipid hydroperoxide | 0.00E+00 |
| 12 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 13 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 14 | GO:0010335: response to non-ionic osmotic stress | 0.00E+00 |
| 15 | GO:0080094: response to trehalose-6-phosphate | 0.00E+00 |
| 16 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 17 | GO:0006021: inositol biosynthetic process | 1.84E-05 |
| 18 | GO:0009904: chloroplast accumulation movement | 3.00E-05 |
| 19 | GO:0010190: cytochrome b6f complex assembly | 4.48E-05 |
| 20 | GO:0046855: inositol phosphate dephosphorylation | 4.48E-05 |
| 21 | GO:0009903: chloroplast avoidance movement | 6.27E-05 |
| 22 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 1.52E-04 |
| 23 | GO:0010426: DNA methylation on cytosine within a CHH sequence | 1.52E-04 |
| 24 | GO:0031426: polycistronic mRNA processing | 1.52E-04 |
| 25 | GO:0043489: RNA stabilization | 1.52E-04 |
| 26 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.52E-04 |
| 27 | GO:0000481: maturation of 5S rRNA | 1.52E-04 |
| 28 | GO:1904964: positive regulation of phytol biosynthetic process | 1.52E-04 |
| 29 | GO:0043686: co-translational protein modification | 1.52E-04 |
| 30 | GO:0071461: cellular response to redox state | 1.52E-04 |
| 31 | GO:1902458: positive regulation of stomatal opening | 1.52E-04 |
| 32 | GO:0010028: xanthophyll cycle | 1.52E-04 |
| 33 | GO:0048363: mucilage pectin metabolic process | 1.52E-04 |
| 34 | GO:0010362: negative regulation of anion channel activity by blue light | 1.52E-04 |
| 35 | GO:0015969: guanosine tetraphosphate metabolic process | 1.52E-04 |
| 36 | GO:0006169: adenosine salvage | 1.52E-04 |
| 37 | GO:0015979: photosynthesis | 1.86E-04 |
| 38 | GO:0015995: chlorophyll biosynthetic process | 2.20E-04 |
| 39 | GO:0018298: protein-chromophore linkage | 2.52E-04 |
| 40 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.75E-04 |
| 41 | GO:0006790: sulfur compound metabolic process | 3.17E-04 |
| 42 | GO:0018026: peptidyl-lysine monomethylation | 3.47E-04 |
| 43 | GO:0071668: plant-type cell wall assembly | 3.47E-04 |
| 44 | GO:0010155: regulation of proton transport | 3.47E-04 |
| 45 | GO:0006729: tetrahydrobiopterin biosynthetic process | 3.47E-04 |
| 46 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.47E-04 |
| 47 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.47E-04 |
| 48 | GO:0051262: protein tetramerization | 3.47E-04 |
| 49 | GO:0042819: vitamin B6 biosynthetic process | 3.47E-04 |
| 50 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.47E-04 |
| 51 | GO:0080005: photosystem stoichiometry adjustment | 3.47E-04 |
| 52 | GO:0019253: reductive pentose-phosphate cycle | 4.07E-04 |
| 53 | GO:0010207: photosystem II assembly | 4.07E-04 |
| 54 | GO:0046854: phosphatidylinositol phosphorylation | 4.57E-04 |
| 55 | GO:0034051: negative regulation of plant-type hypersensitive response | 5.68E-04 |
| 56 | GO:2001295: malonyl-CoA biosynthetic process | 5.68E-04 |
| 57 | GO:0000913: preprophase band assembly | 5.68E-04 |
| 58 | GO:0031022: nuclear migration along microfilament | 5.68E-04 |
| 59 | GO:0006000: fructose metabolic process | 5.68E-04 |
| 60 | GO:0009658: chloroplast organization | 6.49E-04 |
| 61 | GO:0008615: pyridoxine biosynthetic process | 8.13E-04 |
| 62 | GO:0042823: pyridoxal phosphate biosynthetic process | 8.13E-04 |
| 63 | GO:2001141: regulation of RNA biosynthetic process | 8.13E-04 |
| 64 | GO:0010371: regulation of gibberellin biosynthetic process | 8.13E-04 |
| 65 | GO:0006020: inositol metabolic process | 8.13E-04 |
| 66 | GO:0010239: chloroplast mRNA processing | 8.13E-04 |
| 67 | GO:0010021: amylopectin biosynthetic process | 1.08E-03 |
| 68 | GO:2000306: positive regulation of photomorphogenesis | 1.08E-03 |
| 69 | GO:0015994: chlorophyll metabolic process | 1.08E-03 |
| 70 | GO:0045489: pectin biosynthetic process | 1.09E-03 |
| 71 | GO:0019252: starch biosynthetic process | 1.25E-03 |
| 72 | GO:0009791: post-embryonic development | 1.25E-03 |
| 73 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.36E-03 |
| 74 | GO:0031365: N-terminal protein amino acid modification | 1.36E-03 |
| 75 | GO:0044209: AMP salvage | 1.36E-03 |
| 76 | GO:0016032: viral process | 1.43E-03 |
| 77 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.67E-03 |
| 78 | GO:0010405: arabinogalactan protein metabolic process | 1.67E-03 |
| 79 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.67E-03 |
| 80 | GO:0045962: positive regulation of development, heterochronic | 1.67E-03 |
| 81 | GO:0006633: fatty acid biosynthetic process | 1.91E-03 |
| 82 | GO:0010027: thylakoid membrane organization | 1.92E-03 |
| 83 | GO:1901259: chloroplast rRNA processing | 2.01E-03 |
| 84 | GO:0030488: tRNA methylation | 2.01E-03 |
| 85 | GO:0006400: tRNA modification | 2.36E-03 |
| 86 | GO:0032508: DNA duplex unwinding | 2.73E-03 |
| 87 | GO:2000070: regulation of response to water deprivation | 2.73E-03 |
| 88 | GO:0016559: peroxisome fission | 2.73E-03 |
| 89 | GO:0006811: ion transport | 2.75E-03 |
| 90 | GO:0055114: oxidation-reduction process | 3.02E-03 |
| 91 | GO:0032544: plastid translation | 3.12E-03 |
| 92 | GO:0006002: fructose 6-phosphate metabolic process | 3.12E-03 |
| 93 | GO:0071482: cellular response to light stimulus | 3.12E-03 |
| 94 | GO:0022900: electron transport chain | 3.12E-03 |
| 95 | GO:0015996: chlorophyll catabolic process | 3.12E-03 |
| 96 | GO:0007186: G-protein coupled receptor signaling pathway | 3.12E-03 |
| 97 | GO:0016051: carbohydrate biosynthetic process | 3.15E-03 |
| 98 | GO:0009637: response to blue light | 3.15E-03 |
| 99 | GO:0048507: meristem development | 3.53E-03 |
| 100 | GO:0098656: anion transmembrane transport | 3.53E-03 |
| 101 | GO:0010206: photosystem II repair | 3.53E-03 |
| 102 | GO:0009638: phototropism | 3.96E-03 |
| 103 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 3.96E-03 |
| 104 | GO:0006535: cysteine biosynthetic process from serine | 4.40E-03 |
| 105 | GO:0006352: DNA-templated transcription, initiation | 4.86E-03 |
| 106 | GO:0019684: photosynthesis, light reaction | 4.86E-03 |
| 107 | GO:0009773: photosynthetic electron transport in photosystem I | 4.86E-03 |
| 108 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.86E-03 |
| 109 | GO:0008285: negative regulation of cell proliferation | 4.86E-03 |
| 110 | GO:0009409: response to cold | 4.99E-03 |
| 111 | GO:0045037: protein import into chloroplast stroma | 5.34E-03 |
| 112 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.34E-03 |
| 113 | GO:0009785: blue light signaling pathway | 5.83E-03 |
| 114 | GO:0006006: glucose metabolic process | 5.83E-03 |
| 115 | GO:0030036: actin cytoskeleton organization | 5.83E-03 |
| 116 | GO:0009718: anthocyanin-containing compound biosynthetic process | 5.83E-03 |
| 117 | GO:0006094: gluconeogenesis | 5.83E-03 |
| 118 | GO:0009767: photosynthetic electron transport chain | 5.83E-03 |
| 119 | GO:0005986: sucrose biosynthetic process | 5.83E-03 |
| 120 | GO:0030048: actin filament-based movement | 5.83E-03 |
| 121 | GO:0009266: response to temperature stimulus | 6.33E-03 |
| 122 | GO:0034605: cellular response to heat | 6.33E-03 |
| 123 | GO:0010143: cutin biosynthetic process | 6.33E-03 |
| 124 | GO:0010020: chloroplast fission | 6.33E-03 |
| 125 | GO:0019853: L-ascorbic acid biosynthetic process | 6.86E-03 |
| 126 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.40E-03 |
| 127 | GO:0080147: root hair cell development | 7.95E-03 |
| 128 | GO:0019344: cysteine biosynthetic process | 7.95E-03 |
| 129 | GO:0007017: microtubule-based process | 8.51E-03 |
| 130 | GO:0010073: meristem maintenance | 8.51E-03 |
| 131 | GO:0008299: isoprenoid biosynthetic process | 8.51E-03 |
| 132 | GO:0006306: DNA methylation | 9.10E-03 |
| 133 | GO:0019748: secondary metabolic process | 9.69E-03 |
| 134 | GO:0010227: floral organ abscission | 1.03E-02 |
| 135 | GO:0000271: polysaccharide biosynthetic process | 1.22E-02 |
| 136 | GO:0010182: sugar mediated signaling pathway | 1.29E-02 |
| 137 | GO:0009741: response to brassinosteroid | 1.29E-02 |
| 138 | GO:0006520: cellular amino acid metabolic process | 1.29E-02 |
| 139 | GO:0007623: circadian rhythm | 1.34E-02 |
| 140 | GO:0007018: microtubule-based movement | 1.36E-02 |
| 141 | GO:0009646: response to absence of light | 1.36E-02 |
| 142 | GO:0009451: RNA modification | 1.38E-02 |
| 143 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.41E-02 |
| 144 | GO:0010183: pollen tube guidance | 1.42E-02 |
| 145 | GO:0000302: response to reactive oxygen species | 1.50E-02 |
| 146 | GO:0007264: small GTPase mediated signal transduction | 1.57E-02 |
| 147 | GO:0010583: response to cyclopentenone | 1.57E-02 |
| 148 | GO:0030163: protein catabolic process | 1.64E-02 |
| 149 | GO:0009416: response to light stimulus | 1.67E-02 |
| 150 | GO:0000910: cytokinesis | 1.86E-02 |
| 151 | GO:0005975: carbohydrate metabolic process | 2.10E-02 |
| 152 | GO:0009817: defense response to fungus, incompatible interaction | 2.34E-02 |
| 153 | GO:0000160: phosphorelay signal transduction system | 2.43E-02 |
| 154 | GO:0009813: flavonoid biosynthetic process | 2.43E-02 |
| 155 | GO:0009407: toxin catabolic process | 2.51E-02 |
| 156 | GO:0009631: cold acclimation | 2.60E-02 |
| 157 | GO:0007568: aging | 2.60E-02 |
| 158 | GO:0010119: regulation of stomatal movement | 2.60E-02 |
| 159 | GO:0045087: innate immune response | 2.78E-02 |
| 160 | GO:0034599: cellular response to oxidative stress | 2.86E-02 |
| 161 | GO:0006631: fatty acid metabolic process | 3.14E-02 |
| 162 | GO:0009640: photomorphogenesis | 3.32E-02 |
| 163 | GO:0009744: response to sucrose | 3.32E-02 |
| 164 | GO:0042546: cell wall biogenesis | 3.42E-02 |
| 165 | GO:0009636: response to toxic substance | 3.61E-02 |
| 166 | GO:0009965: leaf morphogenesis | 3.61E-02 |
| 167 | GO:0006855: drug transmembrane transport | 3.71E-02 |
| 168 | GO:0042538: hyperosmotic salinity response | 3.91E-02 |
| 169 | GO:0006364: rRNA processing | 4.11E-02 |
| 170 | GO:0010224: response to UV-B | 4.21E-02 |
| 171 | GO:0006096: glycolytic process | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 2 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 3 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 4 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 5 | GO:0036033: mediator complex binding | 0.00E+00 |
| 6 | GO:0008176: tRNA (guanine-N7-)-methyltransferase activity | 0.00E+00 |
| 7 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.13E-06 |
| 8 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.13E-06 |
| 9 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.13E-06 |
| 10 | GO:0000293: ferric-chelate reductase activity | 4.48E-05 |
| 11 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 6.27E-05 |
| 12 | GO:0005525: GTP binding | 9.74E-05 |
| 13 | GO:0042586: peptide deformylase activity | 1.52E-04 |
| 14 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.52E-04 |
| 15 | GO:0004001: adenosine kinase activity | 1.52E-04 |
| 16 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.52E-04 |
| 17 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.52E-04 |
| 18 | GO:0005227: calcium activated cation channel activity | 1.52E-04 |
| 19 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.52E-04 |
| 20 | GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity | 3.47E-04 |
| 21 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.47E-04 |
| 22 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.47E-04 |
| 23 | GO:0048531: beta-1,3-galactosyltransferase activity | 3.47E-04 |
| 24 | GO:0008728: GTP diphosphokinase activity | 3.47E-04 |
| 25 | GO:0050017: L-3-cyanoalanine synthase activity | 3.47E-04 |
| 26 | GO:0042389: omega-3 fatty acid desaturase activity | 3.47E-04 |
| 27 | GO:0033201: alpha-1,4-glucan synthase activity | 3.47E-04 |
| 28 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.47E-04 |
| 29 | GO:0016630: protochlorophyllide reductase activity | 3.47E-04 |
| 30 | GO:0004075: biotin carboxylase activity | 5.68E-04 |
| 31 | GO:0030267: glyoxylate reductase (NADP) activity | 5.68E-04 |
| 32 | GO:0070402: NADPH binding | 5.68E-04 |
| 33 | GO:0004373: glycogen (starch) synthase activity | 5.68E-04 |
| 34 | GO:0003913: DNA photolyase activity | 5.68E-04 |
| 35 | GO:0005504: fatty acid binding | 5.68E-04 |
| 36 | GO:0009882: blue light photoreceptor activity | 8.13E-04 |
| 37 | GO:0043023: ribosomal large subunit binding | 8.13E-04 |
| 38 | GO:0048027: mRNA 5'-UTR binding | 8.13E-04 |
| 39 | GO:0043495: protein anchor | 1.08E-03 |
| 40 | GO:0016279: protein-lysine N-methyltransferase activity | 1.08E-03 |
| 41 | GO:0001053: plastid sigma factor activity | 1.08E-03 |
| 42 | GO:0016987: sigma factor activity | 1.08E-03 |
| 43 | GO:0045430: chalcone isomerase activity | 1.08E-03 |
| 44 | GO:0009011: starch synthase activity | 1.08E-03 |
| 45 | GO:0016491: oxidoreductase activity | 1.28E-03 |
| 46 | GO:0003989: acetyl-CoA carboxylase activity | 1.36E-03 |
| 47 | GO:0003959: NADPH dehydrogenase activity | 1.36E-03 |
| 48 | GO:0003924: GTPase activity | 1.61E-03 |
| 49 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.67E-03 |
| 50 | GO:0042578: phosphoric ester hydrolase activity | 1.67E-03 |
| 51 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.67E-03 |
| 52 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.67E-03 |
| 53 | GO:0004130: cytochrome-c peroxidase activity | 1.67E-03 |
| 54 | GO:0005200: structural constituent of cytoskeleton | 1.71E-03 |
| 55 | GO:0005261: cation channel activity | 2.01E-03 |
| 56 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 2.01E-03 |
| 57 | GO:0004124: cysteine synthase activity | 2.01E-03 |
| 58 | GO:0016832: aldehyde-lyase activity | 2.01E-03 |
| 59 | GO:0004017: adenylate kinase activity | 2.01E-03 |
| 60 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.01E-03 |
| 61 | GO:0019899: enzyme binding | 2.36E-03 |
| 62 | GO:0009881: photoreceptor activity | 2.36E-03 |
| 63 | GO:0043022: ribosome binding | 2.73E-03 |
| 64 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.88E-03 |
| 65 | GO:0042802: identical protein binding | 2.91E-03 |
| 66 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.12E-03 |
| 67 | GO:0008135: translation factor activity, RNA binding | 3.12E-03 |
| 68 | GO:0071949: FAD binding | 3.53E-03 |
| 69 | GO:0008559: xenobiotic-transporting ATPase activity | 4.86E-03 |
| 70 | GO:0046872: metal ion binding | 5.32E-03 |
| 71 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.83E-03 |
| 72 | GO:0031072: heat shock protein binding | 5.83E-03 |
| 73 | GO:0000155: phosphorelay sensor kinase activity | 5.83E-03 |
| 74 | GO:0004565: beta-galactosidase activity | 5.83E-03 |
| 75 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.33E-03 |
| 76 | GO:0008266: poly(U) RNA binding | 6.33E-03 |
| 77 | GO:0003774: motor activity | 6.33E-03 |
| 78 | GO:0016758: transferase activity, transferring hexosyl groups | 9.46E-03 |
| 79 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 9.69E-03 |
| 80 | GO:0022891: substrate-specific transmembrane transporter activity | 1.03E-02 |
| 81 | GO:0008514: organic anion transmembrane transporter activity | 1.09E-02 |
| 82 | GO:0010181: FMN binding | 1.36E-02 |
| 83 | GO:0016853: isomerase activity | 1.36E-02 |
| 84 | GO:0008017: microtubule binding | 1.41E-02 |
| 85 | GO:0016791: phosphatase activity | 1.71E-02 |
| 86 | GO:0016168: chlorophyll binding | 2.02E-02 |
| 87 | GO:0003729: mRNA binding | 2.04E-02 |
| 88 | GO:0008236: serine-type peptidase activity | 2.26E-02 |
| 89 | GO:0050660: flavin adenine dinucleotide binding | 2.41E-02 |
| 90 | GO:0030246: carbohydrate binding | 2.43E-02 |
| 91 | GO:0015238: drug transmembrane transporter activity | 2.43E-02 |
| 92 | GO:0004222: metalloendopeptidase activity | 2.51E-02 |
| 93 | GO:0030145: manganese ion binding | 2.60E-02 |
| 94 | GO:0003746: translation elongation factor activity | 2.78E-02 |
| 95 | GO:0003993: acid phosphatase activity | 2.86E-02 |
| 96 | GO:0004364: glutathione transferase activity | 3.23E-02 |
| 97 | GO:0004185: serine-type carboxypeptidase activity | 3.32E-02 |
| 98 | GO:0016787: hydrolase activity | 3.48E-02 |
| 99 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.52E-02 |
| 100 | GO:0005509: calcium ion binding | 3.65E-02 |
| 101 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.71E-02 |
| 102 | GO:0009055: electron carrier activity | 4.09E-02 |
| 103 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.11E-02 |
| 104 | GO:0016298: lipase activity | 4.21E-02 |
| 105 | GO:0003777: microtubule motor activity | 4.42E-02 |
| 106 | GO:0005515: protein binding | 4.64E-02 |
| 107 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.73E-02 |