GO Enrichment Analysis of Co-expressed Genes with
AT1G29720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 2 | GO:0090697: post-embryonic plant organ morphogenesis | 0.00E+00 |
| 3 | GO:2000469: negative regulation of peroxidase activity | 0.00E+00 |
| 4 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 5 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 6 | GO:0007155: cell adhesion | 1.77E-06 |
| 7 | GO:0010143: cutin biosynthetic process | 1.70E-05 |
| 8 | GO:0006021: inositol biosynthetic process | 2.11E-05 |
| 9 | GO:0031426: polycistronic mRNA processing | 1.64E-04 |
| 10 | GO:0006659: phosphatidylserine biosynthetic process | 1.64E-04 |
| 11 | GO:1902458: positive regulation of stomatal opening | 1.64E-04 |
| 12 | GO:0010362: negative regulation of anion channel activity by blue light | 1.64E-04 |
| 13 | GO:0015969: guanosine tetraphosphate metabolic process | 1.64E-04 |
| 14 | GO:0044550: secondary metabolite biosynthetic process | 2.11E-04 |
| 15 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 2.25E-04 |
| 16 | GO:0009641: shade avoidance | 2.65E-04 |
| 17 | GO:0010192: mucilage biosynthetic process | 2.65E-04 |
| 18 | GO:0010541: acropetal auxin transport | 3.73E-04 |
| 19 | GO:0010155: regulation of proton transport | 3.73E-04 |
| 20 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.73E-04 |
| 21 | GO:0015790: UDP-xylose transport | 3.73E-04 |
| 22 | GO:0009825: multidimensional cell growth | 5.09E-04 |
| 23 | GO:0080055: low-affinity nitrate transport | 6.11E-04 |
| 24 | GO:0046621: negative regulation of organ growth | 6.11E-04 |
| 25 | GO:0010160: formation of animal organ boundary | 6.11E-04 |
| 26 | GO:0009647: skotomorphogenesis | 8.73E-04 |
| 27 | GO:0006168: adenine salvage | 8.73E-04 |
| 28 | GO:0006166: purine ribonucleoside salvage | 8.73E-04 |
| 29 | GO:0010239: chloroplast mRNA processing | 8.73E-04 |
| 30 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 8.73E-04 |
| 31 | GO:0009963: positive regulation of flavonoid biosynthetic process | 8.73E-04 |
| 32 | GO:0032366: intracellular sterol transport | 1.16E-03 |
| 33 | GO:0009649: entrainment of circadian clock | 1.16E-03 |
| 34 | GO:0008295: spermidine biosynthetic process | 1.16E-03 |
| 35 | GO:0007018: microtubule-based movement | 1.30E-03 |
| 36 | GO:0009791: post-embryonic development | 1.40E-03 |
| 37 | GO:0046283: anthocyanin-containing compound metabolic process | 1.47E-03 |
| 38 | GO:0009904: chloroplast accumulation movement | 1.47E-03 |
| 39 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.47E-03 |
| 40 | GO:1902183: regulation of shoot apical meristem development | 1.47E-03 |
| 41 | GO:0044209: AMP salvage | 1.47E-03 |
| 42 | GO:0010158: abaxial cell fate specification | 1.47E-03 |
| 43 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.47E-03 |
| 44 | GO:0046855: inositol phosphate dephosphorylation | 1.80E-03 |
| 45 | GO:0060918: auxin transport | 1.80E-03 |
| 46 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.80E-03 |
| 47 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.80E-03 |
| 48 | GO:0009228: thiamine biosynthetic process | 1.80E-03 |
| 49 | GO:0048280: vesicle fusion with Golgi apparatus | 2.17E-03 |
| 50 | GO:0009903: chloroplast avoidance movement | 2.17E-03 |
| 51 | GO:0030488: tRNA methylation | 2.17E-03 |
| 52 | GO:0009648: photoperiodism | 2.17E-03 |
| 53 | GO:0015995: chlorophyll biosynthetic process | 2.52E-03 |
| 54 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 2.55E-03 |
| 55 | GO:0030307: positive regulation of cell growth | 2.55E-03 |
| 56 | GO:0048437: floral organ development | 2.55E-03 |
| 57 | GO:0043068: positive regulation of programmed cell death | 2.95E-03 |
| 58 | GO:0009704: de-etiolation | 2.95E-03 |
| 59 | GO:2000070: regulation of response to water deprivation | 2.95E-03 |
| 60 | GO:0000105: histidine biosynthetic process | 2.95E-03 |
| 61 | GO:0016559: peroxisome fission | 2.95E-03 |
| 62 | GO:0006811: ion transport | 3.07E-03 |
| 63 | GO:0048527: lateral root development | 3.21E-03 |
| 64 | GO:0010119: regulation of stomatal movement | 3.21E-03 |
| 65 | GO:0009932: cell tip growth | 3.37E-03 |
| 66 | GO:0015996: chlorophyll catabolic process | 3.37E-03 |
| 67 | GO:0007186: G-protein coupled receptor signaling pathway | 3.37E-03 |
| 68 | GO:0009637: response to blue light | 3.52E-03 |
| 69 | GO:0051865: protein autoubiquitination | 3.81E-03 |
| 70 | GO:2000024: regulation of leaf development | 3.81E-03 |
| 71 | GO:0048507: meristem development | 3.81E-03 |
| 72 | GO:0009638: phototropism | 4.27E-03 |
| 73 | GO:0009640: photomorphogenesis | 4.53E-03 |
| 74 | GO:0043069: negative regulation of programmed cell death | 4.75E-03 |
| 75 | GO:0010215: cellulose microfibril organization | 4.75E-03 |
| 76 | GO:0006896: Golgi to vacuole transport | 4.75E-03 |
| 77 | GO:0016485: protein processing | 5.25E-03 |
| 78 | GO:0000038: very long-chain fatty acid metabolic process | 5.25E-03 |
| 79 | GO:0008361: regulation of cell size | 5.77E-03 |
| 80 | GO:0006790: sulfur compound metabolic process | 5.77E-03 |
| 81 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.77E-03 |
| 82 | GO:0045037: protein import into chloroplast stroma | 5.77E-03 |
| 83 | GO:0030048: actin filament-based movement | 6.30E-03 |
| 84 | GO:0009718: anthocyanin-containing compound biosynthetic process | 6.30E-03 |
| 85 | GO:0009767: photosynthetic electron transport chain | 6.30E-03 |
| 86 | GO:0009785: blue light signaling pathway | 6.30E-03 |
| 87 | GO:0006857: oligopeptide transport | 6.53E-03 |
| 88 | GO:0010207: photosystem II assembly | 6.85E-03 |
| 89 | GO:0010223: secondary shoot formation | 6.85E-03 |
| 90 | GO:0009887: animal organ morphogenesis | 6.85E-03 |
| 91 | GO:0010540: basipetal auxin transport | 6.85E-03 |
| 92 | GO:0006541: glutamine metabolic process | 6.85E-03 |
| 93 | GO:0010020: chloroplast fission | 6.85E-03 |
| 94 | GO:0019853: L-ascorbic acid biosynthetic process | 7.41E-03 |
| 95 | GO:0046854: phosphatidylinositol phosphorylation | 7.41E-03 |
| 96 | GO:0042343: indole glucosinolate metabolic process | 7.41E-03 |
| 97 | GO:0010025: wax biosynthetic process | 8.00E-03 |
| 98 | GO:0042753: positive regulation of circadian rhythm | 8.00E-03 |
| 99 | GO:0000162: tryptophan biosynthetic process | 8.00E-03 |
| 100 | GO:0009944: polarity specification of adaxial/abaxial axis | 8.59E-03 |
| 101 | GO:0016114: terpenoid biosynthetic process | 9.84E-03 |
| 102 | GO:0048511: rhythmic process | 9.84E-03 |
| 103 | GO:0098542: defense response to other organism | 9.84E-03 |
| 104 | GO:0019915: lipid storage | 9.84E-03 |
| 105 | GO:0048278: vesicle docking | 9.84E-03 |
| 106 | GO:0009814: defense response, incompatible interaction | 1.05E-02 |
| 107 | GO:0019748: secondary metabolic process | 1.05E-02 |
| 108 | GO:0009294: DNA mediated transformation | 1.11E-02 |
| 109 | GO:0071369: cellular response to ethylene stimulus | 1.11E-02 |
| 110 | GO:0048443: stamen development | 1.18E-02 |
| 111 | GO:0019722: calcium-mediated signaling | 1.18E-02 |
| 112 | GO:0042147: retrograde transport, endosome to Golgi | 1.25E-02 |
| 113 | GO:0006633: fatty acid biosynthetic process | 1.37E-02 |
| 114 | GO:0009958: positive gravitropism | 1.39E-02 |
| 115 | GO:0006520: cellular amino acid metabolic process | 1.39E-02 |
| 116 | GO:0010182: sugar mediated signaling pathway | 1.39E-02 |
| 117 | GO:0045489: pectin biosynthetic process | 1.39E-02 |
| 118 | GO:0010154: fruit development | 1.39E-02 |
| 119 | GO:0061025: membrane fusion | 1.47E-02 |
| 120 | GO:0009646: response to absence of light | 1.47E-02 |
| 121 | GO:0007623: circadian rhythm | 1.51E-02 |
| 122 | GO:0008654: phospholipid biosynthetic process | 1.54E-02 |
| 123 | GO:0006623: protein targeting to vacuole | 1.54E-02 |
| 124 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.62E-02 |
| 125 | GO:0010583: response to cyclopentenone | 1.70E-02 |
| 126 | GO:0009617: response to bacterium | 1.80E-02 |
| 127 | GO:0009639: response to red or far red light | 1.86E-02 |
| 128 | GO:0010252: auxin homeostasis | 1.86E-02 |
| 129 | GO:0009416: response to light stimulus | 1.92E-02 |
| 130 | GO:0007267: cell-cell signaling | 1.94E-02 |
| 131 | GO:0055114: oxidation-reduction process | 2.02E-02 |
| 132 | GO:0010027: thylakoid membrane organization | 2.10E-02 |
| 133 | GO:0006906: vesicle fusion | 2.27E-02 |
| 134 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.36E-02 |
| 135 | GO:0048573: photoperiodism, flowering | 2.36E-02 |
| 136 | GO:0016311: dephosphorylation | 2.45E-02 |
| 137 | GO:0030244: cellulose biosynthetic process | 2.54E-02 |
| 138 | GO:0018298: protein-chromophore linkage | 2.54E-02 |
| 139 | GO:0010311: lateral root formation | 2.63E-02 |
| 140 | GO:0000160: phosphorelay signal transduction system | 2.63E-02 |
| 141 | GO:0010218: response to far red light | 2.72E-02 |
| 142 | GO:0007568: aging | 2.82E-02 |
| 143 | GO:0046777: protein autophosphorylation | 3.09E-02 |
| 144 | GO:0006887: exocytosis | 3.40E-02 |
| 145 | GO:0006631: fatty acid metabolic process | 3.40E-02 |
| 146 | GO:0009926: auxin polar transport | 3.60E-02 |
| 147 | GO:0042546: cell wall biogenesis | 3.70E-02 |
| 148 | GO:0008643: carbohydrate transport | 3.81E-02 |
| 149 | GO:0007165: signal transduction | 3.93E-02 |
| 150 | GO:0009664: plant-type cell wall organization | 4.23E-02 |
| 151 | GO:0006629: lipid metabolic process | 4.26E-02 |
| 152 | GO:0009408: response to heat | 4.26E-02 |
| 153 | GO:0006281: DNA repair | 4.26E-02 |
| 154 | GO:0009585: red, far-red light phototransduction | 4.45E-02 |
| 155 | GO:0010224: response to UV-B | 4.56E-02 |
| 156 | GO:0071555: cell wall organization | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 3 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 4 | GO:0000293: ferric-chelate reductase activity | 5.10E-05 |
| 5 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 1.64E-04 |
| 6 | GO:0004328: formamidase activity | 1.64E-04 |
| 7 | GO:0003879: ATP phosphoribosyltransferase activity | 1.64E-04 |
| 8 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.64E-04 |
| 9 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 1.64E-04 |
| 10 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.64E-04 |
| 11 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.94E-04 |
| 12 | GO:0008728: GTP diphosphokinase activity | 3.73E-04 |
| 13 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 3.73E-04 |
| 14 | GO:0004766: spermidine synthase activity | 3.73E-04 |
| 15 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 3.73E-04 |
| 16 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.73E-04 |
| 17 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.73E-04 |
| 18 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.73E-04 |
| 19 | GO:0005464: UDP-xylose transmembrane transporter activity | 3.73E-04 |
| 20 | GO:0004512: inositol-3-phosphate synthase activity | 3.73E-04 |
| 21 | GO:0048531: beta-1,3-galactosyltransferase activity | 3.73E-04 |
| 22 | GO:0008017: microtubule binding | 4.23E-04 |
| 23 | GO:0004049: anthranilate synthase activity | 6.11E-04 |
| 24 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 6.11E-04 |
| 25 | GO:0050734: hydroxycinnamoyltransferase activity | 6.11E-04 |
| 26 | GO:0003913: DNA photolyase activity | 6.11E-04 |
| 27 | GO:0003999: adenine phosphoribosyltransferase activity | 8.73E-04 |
| 28 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 8.73E-04 |
| 29 | GO:0009882: blue light photoreceptor activity | 8.73E-04 |
| 30 | GO:0048027: mRNA 5'-UTR binding | 8.73E-04 |
| 31 | GO:0005506: iron ion binding | 9.05E-04 |
| 32 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.80E-03 |
| 33 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 1.80E-03 |
| 34 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.80E-03 |
| 35 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.91E-03 |
| 36 | GO:0019825: oxygen binding | 1.93E-03 |
| 37 | GO:0051753: mannan synthase activity | 2.17E-03 |
| 38 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.17E-03 |
| 39 | GO:0102391: decanoate--CoA ligase activity | 2.17E-03 |
| 40 | GO:0009927: histidine phosphotransfer kinase activity | 2.17E-03 |
| 41 | GO:0020037: heme binding | 2.29E-03 |
| 42 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.55E-03 |
| 43 | GO:0042802: identical protein binding | 3.36E-03 |
| 44 | GO:0008173: RNA methyltransferase activity | 3.37E-03 |
| 45 | GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity | 3.37E-03 |
| 46 | GO:0103095: wax ester synthase activity | 3.37E-03 |
| 47 | GO:0000149: SNARE binding | 3.84E-03 |
| 48 | GO:0005484: SNAP receptor activity | 4.53E-03 |
| 49 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 5.77E-03 |
| 50 | GO:0016491: oxidoreductase activity | 5.80E-03 |
| 51 | GO:0008081: phosphoric diester hydrolase activity | 6.30E-03 |
| 52 | GO:0000155: phosphorelay sensor kinase activity | 6.30E-03 |
| 53 | GO:0010329: auxin efflux transmembrane transporter activity | 6.30E-03 |
| 54 | GO:0003777: microtubule motor activity | 6.75E-03 |
| 55 | GO:0003774: motor activity | 6.85E-03 |
| 56 | GO:0031624: ubiquitin conjugating enzyme binding | 6.85E-03 |
| 57 | GO:0008146: sulfotransferase activity | 7.41E-03 |
| 58 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 7.44E-03 |
| 59 | GO:0016746: transferase activity, transferring acyl groups | 8.94E-03 |
| 60 | GO:0030570: pectate lyase activity | 1.11E-02 |
| 61 | GO:0010181: FMN binding | 1.47E-02 |
| 62 | GO:0016887: ATPase activity | 1.62E-02 |
| 63 | GO:0016791: phosphatase activity | 1.86E-02 |
| 64 | GO:0030247: polysaccharide binding | 2.36E-02 |
| 65 | GO:0016757: transferase activity, transferring glycosyl groups | 2.95E-02 |
| 66 | GO:0003993: acid phosphatase activity | 3.10E-02 |
| 67 | GO:0004185: serine-type carboxypeptidase activity | 3.60E-02 |
| 68 | GO:0004871: signal transducer activity | 3.63E-02 |
| 69 | GO:0035091: phosphatidylinositol binding | 3.81E-02 |