Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G28610

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032928: regulation of superoxide anion generation0.00E+00
2GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
3GO:2000505: regulation of energy homeostasis0.00E+00
4GO:0033494: ferulate metabolic process0.00E+00
5GO:0006021: inositol biosynthetic process2.06E-05
6GO:0046855: inositol phosphate dephosphorylation4.99E-05
7GO:0010426: DNA methylation on cytosine within a CHH sequence1.62E-04
8GO:0031426: polycistronic mRNA processing1.62E-04
9GO:0043686: co-translational protein modification1.62E-04
10GO:1902458: positive regulation of stomatal opening1.62E-04
11GO:0048363: mucilage pectin metabolic process1.62E-04
12GO:0010362: negative regulation of anion channel activity by blue light1.62E-04
13GO:0015969: guanosine tetraphosphate metabolic process1.62E-04
14GO:0015979: photosynthesis2.24E-04
15GO:0009773: photosynthetic electron transport in photosystem I3.02E-04
16GO:0006790: sulfur compound metabolic process3.48E-04
17GO:0071668: plant-type cell wall assembly3.69E-04
18GO:0016122: xanthophyll metabolic process3.69E-04
19GO:0010155: regulation of proton transport3.69E-04
20GO:0006729: tetrahydrobiopterin biosynthetic process3.69E-04
21GO:1903426: regulation of reactive oxygen species biosynthetic process3.69E-04
22GO:0015790: UDP-xylose transport3.69E-04
23GO:0010143: cutin biosynthetic process4.47E-04
24GO:0046854: phosphatidylinositol phosphorylation5.00E-04
25GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly8.63E-04
26GO:0006020: inositol metabolic process8.63E-04
27GO:0009152: purine ribonucleotide biosynthetic process8.63E-04
28GO:0046653: tetrahydrofolate metabolic process8.63E-04
29GO:0010239: chloroplast mRNA processing8.63E-04
30GO:0008295: spermidine biosynthetic process1.14E-03
31GO:0032366: intracellular sterol transport1.14E-03
32GO:2000306: positive regulation of photomorphogenesis1.14E-03
33GO:0045489: pectin biosynthetic process1.19E-03
34GO:0010117: photoprotection1.45E-03
35GO:0009904: chloroplast accumulation movement1.45E-03
36GO:0045038: protein import into chloroplast thylakoid membrane1.45E-03
37GO:0031365: N-terminal protein amino acid modification1.45E-03
38GO:0006465: signal peptide processing1.45E-03
39GO:0045962: positive regulation of development, heterochronic1.78E-03
40GO:0009903: chloroplast avoidance movement2.14E-03
41GO:0015995: chlorophyll biosynthetic process2.47E-03
42GO:0042255: ribosome assembly2.91E-03
43GO:0006353: DNA-templated transcription, termination2.91E-03
44GO:2000070: regulation of response to water deprivation2.91E-03
45GO:0016559: peroxisome fission2.91E-03
46GO:0015996: chlorophyll catabolic process3.33E-03
47GO:0007186: G-protein coupled receptor signaling pathway3.33E-03
48GO:0016051: carbohydrate biosynthetic process3.46E-03
49GO:0009637: response to blue light3.46E-03
50GO:0048507: meristem development3.77E-03
51GO:0006631: fatty acid metabolic process4.10E-03
52GO:0009638: phototropism4.22E-03
53GO:0048354: mucilage biosynthetic process involved in seed coat development4.22E-03
54GO:0006535: cysteine biosynthetic process from serine4.69E-03
55GO:0009688: abscisic acid biosynthetic process4.69E-03
56GO:0043069: negative regulation of programmed cell death4.69E-03
57GO:0045037: protein import into chloroplast stroma5.69E-03
58GO:0016024: CDP-diacylglycerol biosynthetic process5.69E-03
59GO:0030048: actin filament-based movement6.22E-03
60GO:0018107: peptidyl-threonine phosphorylation6.22E-03
61GO:0009718: anthocyanin-containing compound biosynthetic process6.22E-03
62GO:0009785: blue light signaling pathway6.22E-03
63GO:0010207: photosystem II assembly6.76E-03
64GO:0009266: response to temperature stimulus6.76E-03
65GO:0034605: cellular response to heat6.76E-03
66GO:0010020: chloroplast fission6.76E-03
67GO:0019853: L-ascorbic acid biosynthetic process7.32E-03
68GO:0006636: unsaturated fatty acid biosynthetic process7.90E-03
69GO:0019344: cysteine biosynthetic process8.48E-03
70GO:0055114: oxidation-reduction process9.03E-03
71GO:0007017: microtubule-based process9.09E-03
72GO:0009768: photosynthesis, light harvesting in photosystem I9.09E-03
73GO:0006306: DNA methylation9.72E-03
74GO:0019722: calcium-mediated signaling1.17E-02
75GO:0009306: protein secretion1.17E-02
76GO:0000271: polysaccharide biosynthetic process1.31E-02
77GO:0006633: fatty acid biosynthetic process1.34E-02
78GO:0010182: sugar mediated signaling pathway1.38E-02
79GO:0007623: circadian rhythm1.48E-02
80GO:0009791: post-embryonic development1.52E-02
81GO:0032502: developmental process1.67E-02
82GO:0007264: small GTPase mediated signal transduction1.67E-02
83GO:0009416: response to light stimulus1.88E-02
84GO:0007267: cell-cell signaling1.91E-02
85GO:0035556: intracellular signal transduction2.01E-02
86GO:0010027: thylakoid membrane organization2.07E-02
87GO:0016126: sterol biosynthetic process2.07E-02
88GO:0016311: dephosphorylation2.42E-02
89GO:0018298: protein-chromophore linkage2.51E-02
90GO:0000160: phosphorelay signal transduction system2.60E-02
91GO:0009813: flavonoid biosynthetic process2.60E-02
92GO:0006811: ion transport2.69E-02
93GO:0009407: toxin catabolic process2.69E-02
94GO:0010119: regulation of stomatal movement2.78E-02
95GO:0007568: aging2.78E-02
96GO:0009853: photorespiration2.97E-02
97GO:0046777: protein autophosphorylation3.04E-02
98GO:0008643: carbohydrate transport3.76E-02
99GO:0007165: signal transduction3.83E-02
100GO:0009636: response to toxic substance3.86E-02
101GO:0009965: leaf morphogenesis3.86E-02
102GO:0032259: methylation4.01E-02
103GO:0006364: rRNA processing4.39E-02
104GO:0006857: oligopeptide transport4.61E-02
RankGO TermAdjusted P value
1GO:0050613: delta14-sterol reductase activity0.00E+00
2GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
3GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
4GO:0052832: inositol monophosphate 3-phosphatase activity1.29E-06
5GO:0008934: inositol monophosphate 1-phosphatase activity1.29E-06
6GO:0052833: inositol monophosphate 4-phosphatase activity1.29E-06
7GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.99E-05
8GO:0042586: peptide deformylase activity1.62E-04
9GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity1.62E-04
10GO:0009496: plastoquinol--plastocyanin reductase activity1.62E-04
11GO:0010347: L-galactose-1-phosphate phosphatase activity1.62E-04
12GO:0080132: fatty acid alpha-hydroxylase activity1.62E-04
13GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity3.69E-04
14GO:0008728: GTP diphosphokinase activity3.69E-04
15GO:0050017: L-3-cyanoalanine synthase activity3.69E-04
16GO:0042389: omega-3 fatty acid desaturase activity3.69E-04
17GO:0004766: spermidine synthase activity3.69E-04
18GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity3.69E-04
19GO:0005464: UDP-xylose transmembrane transporter activity3.69E-04
20GO:0016491: oxidoreductase activity4.10E-04
21GO:0005504: fatty acid binding6.04E-04
22GO:0030267: glyoxylate reductase (NADP) activity6.04E-04
23GO:0016742: hydroxymethyl-, formyl- and related transferase activity6.04E-04
24GO:0008864: formyltetrahydrofolate deformylase activity6.04E-04
25GO:0050734: hydroxycinnamoyltransferase activity6.04E-04
26GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity8.11E-04
27GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor8.63E-04
28GO:0009882: blue light photoreceptor activity8.63E-04
29GO:0048027: mRNA 5'-UTR binding8.63E-04
30GO:0045430: chalcone isomerase activity1.14E-03
31GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.14E-03
32GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.78E-03
33GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.78E-03
34GO:0000293: ferric-chelate reductase activity1.78E-03
35GO:0035673: oligopeptide transmembrane transporter activity1.78E-03
36GO:0003886: DNA (cytosine-5-)-methyltransferase activity2.14E-03
37GO:0009927: histidine phosphotransfer kinase activity2.14E-03
38GO:0004017: adenylate kinase activity2.14E-03
39GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.14E-03
40GO:0004124: cysteine synthase activity2.14E-03
41GO:0051920: peroxiredoxin activity2.14E-03
42GO:0016832: aldehyde-lyase activity2.14E-03
43GO:0016209: antioxidant activity2.91E-03
44GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water3.33E-03
45GO:0003993: acid phosphatase activity3.61E-03
46GO:0015198: oligopeptide transporter activity5.69E-03
47GO:0000155: phosphorelay sensor kinase activity6.22E-03
48GO:0004565: beta-galactosidase activity6.22E-03
49GO:0042973: glucan endo-1,3-beta-D-glucosidase activity6.76E-03
50GO:0003774: motor activity6.76E-03
51GO:0031409: pigment binding7.90E-03
52GO:0016746: transferase activity, transferring acyl groups8.78E-03
53GO:0005509: calcium ion binding1.14E-02
54GO:0003727: single-stranded RNA binding1.17E-02
55GO:0005102: receptor binding1.24E-02
56GO:0008080: N-acetyltransferase activity1.38E-02
57GO:0010181: FMN binding1.45E-02
58GO:0048038: quinone binding1.60E-02
59GO:0016791: phosphatase activity1.83E-02
60GO:0042802: identical protein binding1.88E-02
61GO:0016168: chlorophyll binding2.16E-02
62GO:0004601: peroxidase activity2.29E-02
63GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.78E-02
64GO:0004364: glutathione transferase activity3.45E-02
65GO:0005525: GTP binding3.50E-02
66GO:0035091: phosphatidylinositol binding3.76E-02
67GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.97E-02
68GO:0016787: hydrolase activity3.98E-02
69GO:0003924: GTPase activity4.18E-02
70GO:0003690: double-stranded DNA binding4.50E-02
71GO:0003777: microtubule motor activity4.72E-02
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Gene type



Gene DE type