Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G25682

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:1902289: negative regulation of defense response to oomycetes0.00E+00
3GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
4GO:1900367: positive regulation of defense response to insect0.00E+00
5GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
6GO:1902009: positive regulation of toxin transport0.00E+00
7GO:0010324: membrane invagination0.00E+00
8GO:0010200: response to chitin1.16E-06
9GO:0006468: protein phosphorylation1.68E-05
10GO:0080142: regulation of salicylic acid biosynthetic process1.84E-05
11GO:0010225: response to UV-C3.00E-05
12GO:0031348: negative regulation of defense response3.94E-05
13GO:0009751: response to salicylic acid4.02E-05
14GO:0015969: guanosine tetraphosphate metabolic process1.52E-04
15GO:0009609: response to symbiotic bacterium1.52E-04
16GO:0010421: hydrogen peroxide-mediated programmed cell death1.52E-04
17GO:0006643: membrane lipid metabolic process1.52E-04
18GO:0051180: vitamin transport1.52E-04
19GO:0010482: regulation of epidermal cell division1.52E-04
20GO:0030974: thiamine pyrophosphate transport1.52E-04
21GO:1901183: positive regulation of camalexin biosynthetic process1.52E-04
22GO:0009816: defense response to bacterium, incompatible interaction1.89E-04
23GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway2.00E-04
24GO:0012501: programmed cell death3.17E-04
25GO:0010150: leaf senescence3.29E-04
26GO:0080151: positive regulation of salicylic acid mediated signaling pathway3.47E-04
27GO:0009838: abscission3.47E-04
28GO:0080185: effector dependent induction by symbiont of host immune response3.47E-04
29GO:0010618: aerenchyma formation3.47E-04
30GO:0044419: interspecies interaction between organisms3.47E-04
31GO:0031349: positive regulation of defense response3.47E-04
32GO:0015893: drug transport3.47E-04
33GO:0000719: photoreactive repair3.47E-04
34GO:0019725: cellular homeostasis3.47E-04
35GO:0002221: pattern recognition receptor signaling pathway3.47E-04
36GO:0007166: cell surface receptor signaling pathway4.07E-04
37GO:0009617: response to bacterium4.36E-04
38GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway5.68E-04
39GO:0006048: UDP-N-acetylglucosamine biosynthetic process5.68E-04
40GO:1900140: regulation of seedling development5.68E-04
41GO:0071456: cellular response to hypoxia7.43E-04
42GO:2000022: regulation of jasmonic acid mediated signaling pathway7.43E-04
43GO:0042742: defense response to bacterium7.47E-04
44GO:0006979: response to oxidative stress7.59E-04
45GO:0043207: response to external biotic stimulus8.13E-04
46GO:0072334: UDP-galactose transmembrane transport8.13E-04
47GO:0072583: clathrin-dependent endocytosis8.13E-04
48GO:0009626: plant-type hypersensitive response9.33E-04
49GO:0060548: negative regulation of cell death1.08E-03
50GO:0051567: histone H3-K9 methylation1.08E-03
51GO:0006886: intracellular protein transport1.23E-03
52GO:0034052: positive regulation of plant-type hypersensitive response1.36E-03
53GO:1900425: negative regulation of defense response to bacterium1.67E-03
54GO:0009759: indole glucosinolate biosynthetic process1.67E-03
55GO:0010942: positive regulation of cell death1.67E-03
56GO:0001666: response to hypoxia1.92E-03
57GO:0010555: response to mannitol2.01E-03
58GO:0010310: regulation of hydrogen peroxide metabolic process2.01E-03
59GO:2000067: regulation of root morphogenesis2.01E-03
60GO:0031930: mitochondria-nucleus signaling pathway2.01E-03
61GO:0045926: negative regulation of growth2.01E-03
62GO:0009627: systemic acquired resistance2.14E-03
63GO:0010044: response to aluminum ion2.36E-03
64GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.36E-03
65GO:0009610: response to symbiotic fungus2.36E-03
66GO:0046470: phosphatidylcholine metabolic process2.36E-03
67GO:0043090: amino acid import2.36E-03
68GO:1900056: negative regulation of leaf senescence2.36E-03
69GO:0050829: defense response to Gram-negative bacterium2.36E-03
70GO:0009787: regulation of abscisic acid-activated signaling pathway2.73E-03
71GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline2.73E-03
72GO:0009819: drought recovery2.73E-03
73GO:0030162: regulation of proteolysis2.73E-03
74GO:0006605: protein targeting2.73E-03
75GO:0007568: aging2.88E-03
76GO:2000031: regulation of salicylic acid mediated signaling pathway3.12E-03
77GO:0007186: G-protein coupled receptor signaling pathway3.12E-03
78GO:0010120: camalexin biosynthetic process3.12E-03
79GO:0009821: alkaloid biosynthetic process3.53E-03
80GO:0010112: regulation of systemic acquired resistance3.53E-03
81GO:1900426: positive regulation of defense response to bacterium3.96E-03
82GO:0009611: response to wounding3.98E-03
83GO:0051707: response to other organism4.05E-03
84GO:0000209: protein polyubiquitination4.22E-03
85GO:0006032: chitin catabolic process4.40E-03
86GO:0048765: root hair cell differentiation4.86E-03
87GO:0019684: photosynthesis, light reaction4.86E-03
88GO:0009750: response to fructose4.86E-03
89GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.90E-03
90GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway5.13E-03
91GO:0016192: vesicle-mediated transport5.24E-03
92GO:0002213: defense response to insect5.34E-03
93GO:0010105: negative regulation of ethylene-activated signaling pathway5.34E-03
94GO:0055046: microgametogenesis5.83E-03
95GO:2000012: regulation of auxin polar transport5.83E-03
96GO:0045892: negative regulation of transcription, DNA-templated6.30E-03
97GO:0009266: response to temperature stimulus6.33E-03
98GO:0002237: response to molecule of bacterial origin6.33E-03
99GO:0046688: response to copper ion6.86E-03
100GO:0070588: calcium ion transmembrane transport6.86E-03
101GO:0009620: response to fungus7.09E-03
102GO:0030150: protein import into mitochondrial matrix7.95E-03
103GO:0080147: root hair cell development7.95E-03
104GO:2000377: regulation of reactive oxygen species metabolic process7.95E-03
105GO:0006825: copper ion transport8.51E-03
106GO:0051302: regulation of cell division8.51E-03
107GO:0010026: trichome differentiation8.51E-03
108GO:0009753: response to jasmonic acid8.81E-03
109GO:0010431: seed maturation9.10E-03
110GO:0016998: cell wall macromolecule catabolic process9.10E-03
111GO:0030433: ubiquitin-dependent ERAD pathway9.69E-03
112GO:0009625: response to insect1.03E-02
113GO:0009411: response to UV1.03E-02
114GO:0009737: response to abscisic acid1.10E-02
115GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.16E-02
116GO:0009749: response to glucose1.42E-02
117GO:0071554: cell wall organization or biogenesis1.50E-02
118GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.51E-02
119GO:0006470: protein dephosphorylation1.54E-02
120GO:0015031: protein transport1.61E-02
121GO:0010286: heat acclimation1.79E-02
122GO:0006904: vesicle docking involved in exocytosis1.79E-02
123GO:0035556: intracellular signal transduction1.79E-02
124GO:0009615: response to virus1.94E-02
125GO:0010029: regulation of seed germination2.02E-02
126GO:0006952: defense response2.12E-02
127GO:0006950: response to stress2.18E-02
128GO:0008219: cell death2.34E-02
129GO:0009817: defense response to fungus, incompatible interaction2.34E-02
130GO:0009723: response to ethylene2.41E-02
131GO:0048366: leaf development2.46E-02
132GO:0009407: toxin catabolic process2.51E-02
133GO:0006865: amino acid transport2.69E-02
134GO:0006839: mitochondrial transport3.05E-02
135GO:0007275: multicellular organism development3.07E-02
136GO:0006887: exocytosis3.14E-02
137GO:0006897: endocytosis3.14E-02
138GO:0042542: response to hydrogen peroxide3.23E-02
139GO:0010114: response to red light3.32E-02
140GO:0009744: response to sucrose3.32E-02
141GO:0007165: signal transduction3.34E-02
142GO:0009636: response to toxic substance3.61E-02
143GO:0009965: leaf morphogenesis3.61E-02
144GO:0016042: lipid catabolic process3.71E-02
145GO:0031347: regulation of defense response3.81E-02
146GO:0006629: lipid metabolic process3.81E-02
147GO:0009408: response to heat3.81E-02
148GO:0042538: hyperosmotic salinity response3.91E-02
149GO:0009809: lignin biosynthetic process4.11E-02
150GO:0009736: cytokinin-activated signaling pathway4.11E-02
151GO:0010224: response to UV-B4.21E-02
RankGO TermAdjusted P value
1GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
2GO:0008320: protein transmembrane transporter activity9.44E-07
3GO:0032050: clathrin heavy chain binding1.52E-04
4GO:2001227: quercitrin binding1.52E-04
5GO:1901149: salicylic acid binding1.52E-04
6GO:0090422: thiamine pyrophosphate transporter activity1.52E-04
7GO:0015085: calcium ion transmembrane transporter activity1.52E-04
8GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity1.52E-04
9GO:2001147: camalexin binding1.52E-04
10GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.94E-04
11GO:0015036: disulfide oxidoreductase activity3.47E-04
12GO:0008728: GTP diphosphokinase activity3.47E-04
13GO:0004672: protein kinase activity4.24E-04
14GO:0001664: G-protein coupled receptor binding5.68E-04
15GO:0016531: copper chaperone activity5.68E-04
16GO:0031683: G-protein beta/gamma-subunit complex binding5.68E-04
17GO:0005524: ATP binding5.69E-04
18GO:0004674: protein serine/threonine kinase activity6.80E-04
19GO:0031625: ubiquitin protein ligase binding7.96E-04
20GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.36E-03
21GO:0005459: UDP-galactose transmembrane transporter activity1.36E-03
22GO:0005546: phosphatidylinositol-4,5-bisphosphate binding1.36E-03
23GO:0004656: procollagen-proline 4-dioxygenase activity2.01E-03
24GO:0004806: triglyceride lipase activity2.26E-03
25GO:0043295: glutathione binding2.36E-03
26GO:0016301: kinase activity2.67E-03
27GO:0004714: transmembrane receptor protein tyrosine kinase activity2.73E-03
28GO:0004630: phospholipase D activity3.12E-03
29GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity3.12E-03
30GO:0071949: FAD binding3.53E-03
31GO:0016844: strictosidine synthase activity3.96E-03
32GO:0004568: chitinase activity4.40E-03
33GO:0008171: O-methyltransferase activity4.40E-03
34GO:0005543: phospholipid binding4.86E-03
35GO:0061630: ubiquitin protein ligase activity5.24E-03
36GO:0005388: calcium-transporting ATPase activity5.83E-03
37GO:0004871: signal transducer activity6.55E-03
38GO:0031418: L-ascorbic acid binding7.95E-03
39GO:0004707: MAP kinase activity9.10E-03
40GO:0033612: receptor serine/threonine kinase binding9.10E-03
41GO:0005509: calcium ion binding9.92E-03
42GO:0019901: protein kinase binding1.42E-02
43GO:0004197: cysteine-type endopeptidase activity1.57E-02
44GO:0004842: ubiquitin-protein transferase activity1.82E-02
45GO:0016413: O-acetyltransferase activity1.86E-02
46GO:0008375: acetylglucosaminyltransferase activity2.10E-02
47GO:0009931: calcium-dependent protein serine/threonine kinase activity2.10E-02
48GO:0016740: transferase activity2.15E-02
49GO:0004683: calmodulin-dependent protein kinase activity2.18E-02
50GO:0050897: cobalt ion binding2.60E-02
51GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.78E-02
52GO:0004364: glutathione transferase activity3.23E-02
53GO:0004722: protein serine/threonine phosphatase activity3.39E-02
54GO:0015293: symporter activity3.61E-02
55GO:0005198: structural molecule activity3.61E-02
56GO:0016298: lipase activity4.21E-02
57GO:0015171: amino acid transmembrane transporter activity4.42E-02
58GO:0008234: cysteine-type peptidase activity4.42E-02
59GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.73E-02
60GO:0043565: sequence-specific DNA binding4.78E-02
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Gene type



Gene DE type