co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G25460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006490: oligosaccharide-lipid intermediate biosynthetic process	0.00E+00
2	GO:0015833: peptide transport	0.00E+00
3	GO:0042430: indole-containing compound metabolic process	0.00E+00
4	GO:0010120: camalexin biosynthetic process	7.69E-05
5	GO:1900368: regulation of RNA interference	1.04E-04
6	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.04E-04
7	GO:0046244: salicylic acid catabolic process	1.04E-04
8	GO:0042939: tripeptide transport	2.44E-04
9	GO:0009805: coumarin biosynthetic process	2.44E-04
10	GO:0006672: ceramide metabolic process	2.44E-04
11	GO:0045732: positive regulation of protein catabolic process	2.44E-04
12	GO:0006874: cellular calcium ion homeostasis	3.76E-04
13	GO:2000082: regulation of L-ascorbic acid biosynthetic process	4.05E-04
14	GO:0071456: cellular response to hypoxia	4.52E-04
15	GO:0019748: secondary metabolic process	4.52E-04
16	GO:0002239: response to oomycetes	5.82E-04
17	GO:0010971: positive regulation of G2/M transition of mitotic cell cycle	5.82E-04
18	GO:0006809: nitric oxide biosynthetic process	5.82E-04
19	GO:0006952: defense response	7.69E-04
20	GO:0042938: dipeptide transport	7.73E-04
21	GO:0045227: capsule polysaccharide biosynthetic process	7.73E-04
22	GO:0010483: pollen tube reception	7.73E-04
23	GO:0010387: COP9 signalosome assembly	7.73E-04
24	GO:0033358: UDP-L-arabinose biosynthetic process	7.73E-04
25	GO:0018279: protein N-linked glycosylation via asparagine	9.77E-04
26	GO:0006544: glycine metabolic process	9.77E-04
27	GO:0010150: leaf senescence	1.13E-03
28	GO:0009635: response to herbicide	1.19E-03
29	GO:0006561: proline biosynthetic process	1.19E-03
30	GO:0006563: L-serine metabolic process	1.19E-03
31	GO:0009617: response to bacterium	1.40E-03
32	GO:0009612: response to mechanical stimulus	1.43E-03
33	GO:0008219: cell death	1.51E-03
34	GO:1900056: negative regulation of leaf senescence	1.67E-03
35	GO:0000338: protein deneddylation	1.67E-03
36	GO:0010100: negative regulation of photomorphogenesis	2.21E-03
37	GO:0010204: defense response signaling pathway, resistance gene-independent	2.21E-03
38	GO:0009808: lignin metabolic process	2.21E-03
39	GO:0009699: phenylpropanoid biosynthetic process	2.21E-03
40	GO:0007186: G-protein coupled receptor signaling pathway	2.21E-03
41	GO:0043067: regulation of programmed cell death	2.79E-03
42	GO:0035999: tetrahydrofolate interconversion	2.79E-03
43	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.10E-03
44	GO:0009682: induced systemic resistance	3.42E-03
45	GO:0006790: sulfur compound metabolic process	3.75E-03
46	GO:0007275: multicellular organism development	3.85E-03
47	GO:0009718: anthocyanin-containing compound biosynthetic process	4.09E-03
48	GO:0010075: regulation of meristem growth	4.09E-03
49	GO:0009620: response to fungus	4.24E-03
50	GO:0007165: signal transduction	4.26E-03
51	GO:0009934: regulation of meristem structural organization	4.44E-03
52	GO:0046854: phosphatidylinositol phosphorylation	4.80E-03
53	GO:0009225: nucleotide-sugar metabolic process	4.80E-03
54	GO:0042742: defense response to bacterium	5.10E-03
55	GO:0006863: purine nucleobase transport	5.18E-03
56	GO:0034976: response to endoplasmic reticulum stress	5.18E-03
57	GO:0005992: trehalose biosynthetic process	5.56E-03
58	GO:0006487: protein N-linked glycosylation	5.56E-03
59	GO:0016114: terpenoid biosynthetic process	6.35E-03
60	GO:0030433: ubiquitin-dependent ERAD pathway	6.76E-03
61	GO:0031348: negative regulation of defense response	6.76E-03
62	GO:0006012: galactose metabolic process	7.18E-03
63	GO:0009306: protein secretion	7.61E-03
64	GO:0006284: base-excision repair	7.61E-03
65	GO:0009561: megagametogenesis	7.61E-03
66	GO:0008284: positive regulation of cell proliferation	8.05E-03
67	GO:0009416: response to light stimulus	8.64E-03
68	GO:0010197: polar nucleus fusion	8.95E-03
69	GO:0048868: pollen tube development	8.95E-03
70	GO:0006885: regulation of pH	8.95E-03
71	GO:0006623: protein targeting to vacuole	9.90E-03
72	GO:0002229: defense response to oomycetes	1.04E-02
73	GO:0009607: response to biotic stimulus	1.40E-02
74	GO:0009627: systemic acquired resistance	1.45E-02
75	GO:0042128: nitrate assimilation	1.45E-02
76	GO:0009817: defense response to fungus, incompatible interaction	1.62E-02
77	GO:0009407: toxin catabolic process	1.74E-02
78	GO:0016051: carbohydrate biosynthetic process	1.92E-02
79	GO:0009867: jasmonic acid mediated signaling pathway	1.92E-02
80	GO:0010114: response to red light	2.30E-02
81	GO:0009926: auxin polar transport	2.30E-02
82	GO:0051707: response to other organism	2.30E-02
83	GO:0009640: photomorphogenesis	2.30E-02
84	GO:0009636: response to toxic substance	2.50E-02
85	GO:0050832: defense response to fungus	2.62E-02
86	GO:0006812: cation transport	2.70E-02
87	GO:0042538: hyperosmotic salinity response	2.70E-02
88	GO:0016567: protein ubiquitination	2.71E-02
89	GO:0006486: protein glycosylation	2.84E-02
90	GO:0009585: red, far-red light phototransduction	2.84E-02
91	GO:0006813: potassium ion transport	2.84E-02
92	GO:0051603: proteolysis involved in cellular protein catabolic process	2.91E-02
93	GO:0006096: glycolytic process	3.20E-02
94	GO:0043086: negative regulation of catalytic activity	3.20E-02
95	GO:0009626: plant-type hypersensitive response	3.35E-02
96	GO:0055114: oxidation-reduction process	4.01E-02
97	GO:0009058: biosynthetic process	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0000026: alpha-1,2-mannosyltransferase activity	0.00E+00
2	GO:0052926: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
3	GO:0001729: ceramide kinase activity	0.00E+00
4	GO:0052918: dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
5	GO:0004377: GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
6	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
7	GO:0015197: peptide transporter activity	0.00E+00
8	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
9	GO:0102043: isopentenyl phosphate kinase activity	0.00E+00
10	GO:0000386: second spliceosomal transesterification activity	1.04E-04
11	GO:0043546: molybdopterin cofactor binding	1.04E-04
12	GO:0050464: nitrate reductase (NADPH) activity	1.04E-04
13	GO:0008940: nitrate reductase activity	1.04E-04
14	GO:0009703: nitrate reductase (NADH) activity	1.04E-04
15	GO:0015157: oligosaccharide transmembrane transporter activity	1.04E-04
16	GO:0042937: tripeptide transporter activity	2.44E-04
17	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	2.44E-04
18	GO:0004970: ionotropic glutamate receptor activity	2.74E-04
19	GO:0005217: intracellular ligand-gated ion channel activity	2.74E-04
20	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	4.05E-04
21	GO:0046527: glucosyltransferase activity	7.73E-04
22	GO:0050373: UDP-arabinose 4-epimerase activity	7.73E-04
23	GO:0042936: dipeptide transporter activity	7.73E-04
24	GO:0004930: G-protein coupled receptor activity	7.73E-04
25	GO:0030151: molybdenum ion binding	9.77E-04
26	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	9.77E-04
27	GO:0004372: glycine hydroxymethyltransferase activity	9.77E-04
28	GO:0051213: dioxygenase activity	1.16E-03
29	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.43E-03
30	GO:0003978: UDP-glucose 4-epimerase activity	1.43E-03
31	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.90E-03
32	GO:0003951: NAD+ kinase activity	2.21E-03
33	GO:0004497: monooxygenase activity	2.55E-03
34	GO:0030246: carbohydrate binding	2.74E-03
35	GO:0030955: potassium ion binding	2.79E-03
36	GO:0004743: pyruvate kinase activity	2.79E-03
37	GO:0008559: xenobiotic-transporting ATPase activity	3.42E-03
38	GO:0016301: kinase activity	4.05E-03
39	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.09E-03
40	GO:0005345: purine nucleobase transmembrane transporter activity	5.95E-03
41	GO:0004298: threonine-type endopeptidase activity	6.35E-03
42	GO:0008810: cellulase activity	7.18E-03
43	GO:0004499: N,N-dimethylaniline monooxygenase activity	7.61E-03
44	GO:0003727: single-stranded RNA binding	7.61E-03
45	GO:0005451: monovalent cation:proton antiporter activity	8.49E-03
46	GO:0015299: solute:proton antiporter activity	9.42E-03
47	GO:0020037: heme binding	1.02E-02
48	GO:0015385: sodium:proton antiporter activity	1.14E-02
49	GO:0000287: magnesium ion binding	1.22E-02
50	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.23E-02
51	GO:0008237: metallopeptidase activity	1.24E-02
52	GO:0019825: oxygen binding	1.35E-02
53	GO:0030247: polysaccharide binding	1.51E-02
54	GO:0030145: manganese ion binding	1.80E-02
55	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.99E-02
56	GO:0004722: protein serine/threonine phosphatase activity	2.02E-02
57	GO:0005506: iron ion binding	2.07E-02
58	GO:0050661: NADP binding	2.11E-02
59	GO:0051539: 4 iron, 4 sulfur cluster binding	2.11E-02
60	GO:0004364: glutathione transferase activity	2.24E-02
61	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.84E-02
62	GO:0004842: ubiquitin-protein transferase activity	3.17E-02
63	GO:0045735: nutrient reservoir activity	3.20E-02
64	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.43E-02
65	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.43E-02
66	GO:0016887: ATPase activity	3.53E-02
67	GO:0003779: actin binding	3.58E-02
68	GO:0051082: unfolded protein binding	3.66E-02
69	GO:0016758: transferase activity, transferring hexosyl groups	4.21E-02
70	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.37E-02
71	GO:0030170: pyridoxal phosphate binding	4.62E-02