Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G24764

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046396: D-galacturonate metabolic process0.00E+00
2GO:1905177: tracheary element differentiation0.00E+00
3GO:0006429: leucyl-tRNA aminoacylation0.00E+00
4GO:0019685: photosynthesis, dark reaction0.00E+00
5GO:1905421: regulation of plant organ morphogenesis0.00E+00
6GO:0043488: regulation of mRNA stability0.00E+00
7GO:0030155: regulation of cell adhesion0.00E+00
8GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
9GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
10GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
11GO:0046460: neutral lipid biosynthetic process0.00E+00
12GO:0031116: positive regulation of microtubule polymerization0.00E+00
13GO:0042817: pyridoxal metabolic process0.00E+00
14GO:0006114: glycerol biosynthetic process0.00E+00
15GO:0009658: chloroplast organization3.57E-06
16GO:0006415: translational termination5.76E-05
17GO:0032543: mitochondrial translation1.31E-04
18GO:1901259: chloroplast rRNA processing2.54E-04
19GO:0006730: one-carbon metabolic process2.56E-04
20GO:0048528: post-embryonic root development3.30E-04
21GO:0042547: cell wall modification involved in multidimensional cell growth3.70E-04
22GO:0042371: vitamin K biosynthetic process3.70E-04
23GO:1902458: positive regulation of stomatal opening3.70E-04
24GO:0005991: trehalose metabolic process3.70E-04
25GO:0006747: FAD biosynthetic process3.70E-04
26GO:0006419: alanyl-tRNA aminoacylation3.70E-04
27GO:2000025: regulation of leaf formation3.70E-04
28GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process3.70E-04
29GO:0000476: maturation of 4.5S rRNA3.70E-04
30GO:0000967: rRNA 5'-end processing3.70E-04
31GO:0070509: calcium ion import3.70E-04
32GO:0006353: DNA-templated transcription, termination4.14E-04
33GO:0070413: trehalose metabolism in response to stress4.14E-04
34GO:0032544: plastid translation5.06E-04
35GO:0009657: plastid organization5.06E-04
36GO:1900865: chloroplast RNA modification7.16E-04
37GO:1900033: negative regulation of trichome patterning8.05E-04
38GO:0009220: pyrimidine ribonucleotide biosynthetic process8.05E-04
39GO:1903426: regulation of reactive oxygen species biosynthetic process8.05E-04
40GO:0015804: neutral amino acid transport8.05E-04
41GO:0034470: ncRNA processing8.05E-04
42GO:0006739: NADP metabolic process8.05E-04
43GO:0034755: iron ion transmembrane transport8.05E-04
44GO:0009627: systemic acquired resistance1.06E-03
45GO:2000012: regulation of auxin polar transport1.24E-03
46GO:0001578: microtubule bundle formation1.30E-03
47GO:0045493: xylan catabolic process1.30E-03
48GO:0033591: response to L-ascorbic acid1.30E-03
49GO:0048281: inflorescence morphogenesis1.30E-03
50GO:0006954: inflammatory response1.30E-03
51GO:0010623: programmed cell death involved in cell development1.30E-03
52GO:0009790: embryo development1.82E-03
53GO:0016556: mRNA modification1.88E-03
54GO:0043572: plastid fission1.88E-03
55GO:2001141: regulation of RNA biosynthetic process1.88E-03
56GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.88E-03
57GO:0009102: biotin biosynthetic process1.88E-03
58GO:0010239: chloroplast mRNA processing1.88E-03
59GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.88E-03
60GO:0009226: nucleotide-sugar biosynthetic process1.88E-03
61GO:0008615: pyridoxine biosynthetic process1.88E-03
62GO:0006424: glutamyl-tRNA aminoacylation1.88E-03
63GO:0010148: transpiration1.88E-03
64GO:0005992: trehalose biosynthetic process1.93E-03
65GO:0006418: tRNA aminoacylation for protein translation2.13E-03
66GO:0045490: pectin catabolic process2.35E-03
67GO:0048629: trichome patterning2.52E-03
68GO:0051322: anaphase2.52E-03
69GO:0009765: photosynthesis, light harvesting2.52E-03
70GO:0022622: root system development2.52E-03
71GO:0010508: positive regulation of autophagy2.52E-03
72GO:0007020: microtubule nucleation2.52E-03
73GO:0006734: NADH metabolic process2.52E-03
74GO:0044205: 'de novo' UMP biosynthetic process2.52E-03
75GO:0009664: plant-type cell wall organization3.21E-03
76GO:0010236: plastoquinone biosynthetic process3.23E-03
77GO:0045038: protein import into chloroplast thylakoid membrane3.23E-03
78GO:0016123: xanthophyll biosynthetic process3.23E-03
79GO:0006465: signal peptide processing3.23E-03
80GO:0046785: microtubule polymerization3.23E-03
81GO:0016120: carotene biosynthetic process3.23E-03
82GO:0050665: hydrogen peroxide biosynthetic process3.99E-03
83GO:0006655: phosphatidylglycerol biosynthetic process3.99E-03
84GO:0016554: cytidine to uridine editing3.99E-03
85GO:0032973: amino acid export3.99E-03
86GO:0009854: oxidative photosynthetic carbon pathway4.81E-03
87GO:0009648: photoperiodism4.81E-03
88GO:0009955: adaxial/abaxial pattern specification4.81E-03
89GO:0042372: phylloquinone biosynthetic process4.81E-03
90GO:0046835: carbohydrate phosphorylation4.81E-03
91GO:0034389: lipid particle organization4.81E-03
92GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process5.68E-03
93GO:0010103: stomatal complex morphogenesis5.68E-03
94GO:0032880: regulation of protein localization5.68E-03
95GO:0009772: photosynthetic electron transport in photosystem II5.68E-03
96GO:0043090: amino acid import5.68E-03
97GO:0070370: cellular heat acclimation5.68E-03
98GO:0010444: guard mother cell differentiation5.68E-03
99GO:0006400: tRNA modification5.68E-03
100GO:0006508: proteolysis5.86E-03
101GO:2000070: regulation of response to water deprivation6.61E-03
102GO:0000105: histidine biosynthetic process6.61E-03
103GO:0009231: riboflavin biosynthetic process6.61E-03
104GO:0052543: callose deposition in cell wall6.61E-03
105GO:0042255: ribosome assembly6.61E-03
106GO:0010027: thylakoid membrane organization6.87E-03
107GO:0009793: embryo development ending in seed dormancy7.53E-03
108GO:0071482: cellular response to light stimulus7.58E-03
109GO:0001558: regulation of cell growth7.58E-03
110GO:0009827: plant-type cell wall modification7.58E-03
111GO:0010204: defense response signaling pathway, resistance gene-independent7.58E-03
112GO:0000373: Group II intron splicing8.60E-03
113GO:0000902: cell morphogenesis8.60E-03
114GO:0006098: pentose-phosphate shunt8.60E-03
115GO:0080144: amino acid homeostasis8.60E-03
116GO:0019432: triglyceride biosynthetic process8.60E-03
117GO:0006783: heme biosynthetic process8.60E-03
118GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.67E-03
119GO:0006949: syncytium formation1.08E-02
120GO:0006259: DNA metabolic process1.08E-02
121GO:0006782: protoporphyrinogen IX biosynthetic process1.08E-02
122GO:0009684: indoleacetic acid biosynthetic process1.19E-02
123GO:0006265: DNA topological change1.19E-02
124GO:0009089: lysine biosynthetic process via diaminopimelate1.19E-02
125GO:0006879: cellular iron ion homeostasis1.19E-02
126GO:0006352: DNA-templated transcription, initiation1.19E-02
127GO:0007166: cell surface receptor signaling pathway1.31E-02
128GO:0016024: CDP-diacylglycerol biosynthetic process1.32E-02
129GO:0045037: protein import into chloroplast stroma1.32E-02
130GO:0008380: RNA splicing1.39E-02
131GO:0050826: response to freezing1.44E-02
132GO:0006094: gluconeogenesis1.44E-02
133GO:0010020: chloroplast fission1.57E-02
134GO:0009965: leaf morphogenesis1.66E-02
135GO:0090351: seedling development1.70E-02
136GO:0070588: calcium ion transmembrane transport1.70E-02
137GO:0071732: cellular response to nitric oxide1.70E-02
138GO:0006071: glycerol metabolic process1.84E-02
139GO:0006833: water transport1.84E-02
140GO:0000162: tryptophan biosynthetic process1.84E-02
141GO:0009116: nucleoside metabolic process1.98E-02
142GO:0009944: polarity specification of adaxial/abaxial axis1.98E-02
143GO:0030150: protein import into mitochondrial matrix1.98E-02
144GO:0006364: rRNA processing1.99E-02
145GO:0051603: proteolysis involved in cellular protein catabolic process2.06E-02
146GO:0051302: regulation of cell division2.12E-02
147GO:0043622: cortical microtubule organization2.12E-02
148GO:0005975: carbohydrate metabolic process2.14E-02
149GO:0046686: response to cadmium ion2.25E-02
150GO:0003333: amino acid transmembrane transport2.27E-02
151GO:0048511: rhythmic process2.27E-02
152GO:0061077: chaperone-mediated protein folding2.27E-02
153GO:0031348: negative regulation of defense response2.42E-02
154GO:0009814: defense response, incompatible interaction2.42E-02
155GO:0071369: cellular response to ethylene stimulus2.58E-02
156GO:0001944: vasculature development2.58E-02
157GO:0006012: galactose metabolic process2.58E-02
158GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.58E-02
159GO:0010082: regulation of root meristem growth2.58E-02
160GO:0009686: gibberellin biosynthetic process2.58E-02
161GO:0006468: protein phosphorylation2.66E-02
162GO:0009306: protein secretion2.73E-02
163GO:0010089: xylem development2.73E-02
164GO:0071555: cell wall organization2.77E-02
165GO:0016117: carotenoid biosynthetic process2.90E-02
166GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.90E-02
167GO:0008284: positive regulation of cell proliferation2.90E-02
168GO:0008033: tRNA processing3.06E-02
169GO:0034220: ion transmembrane transport3.06E-02
170GO:0048653: anther development3.06E-02
171GO:0000271: polysaccharide biosynthetic process3.06E-02
172GO:0010182: sugar mediated signaling pathway3.23E-02
173GO:0010268: brassinosteroid homeostasis3.23E-02
174GO:0009958: positive gravitropism3.23E-02
175GO:0045489: pectin biosynthetic process3.23E-02
176GO:0042752: regulation of circadian rhythm3.40E-02
177GO:0007059: chromosome segregation3.40E-02
178GO:0008654: phospholipid biosynthetic process3.57E-02
179GO:0016132: brassinosteroid biosynthetic process3.75E-02
180GO:0000302: response to reactive oxygen species3.75E-02
181GO:0032502: developmental process3.93E-02
182GO:0016032: viral process3.93E-02
183GO:0016042: lipid catabolic process3.95E-02
184GO:0071281: cellular response to iron ion4.11E-02
185GO:0009828: plant-type cell wall loosening4.30E-02
186GO:0016125: sterol metabolic process4.30E-02
187GO:0006413: translational initiation4.55E-02
188GO:0040008: regulation of growth4.66E-02
189GO:0000910: cytokinesis4.68E-02
190GO:0001666: response to hypoxia4.87E-02
191GO:0009911: positive regulation of flower development4.87E-02
RankGO TermAdjusted P value
1GO:0004056: argininosuccinate lyase activity0.00E+00
2GO:0015267: channel activity0.00E+00
3GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
4GO:0004076: biotin synthase activity0.00E+00
5GO:0043136: glycerol-3-phosphatase activity0.00E+00
6GO:0000121: glycerol-1-phosphatase activity0.00E+00
7GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
8GO:0043864: indoleacetamide hydrolase activity0.00E+00
9GO:0047912: galacturonokinase activity0.00E+00
10GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
11GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
12GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
13GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
14GO:0045435: lycopene epsilon cyclase activity0.00E+00
15GO:0004822: isoleucine-tRNA ligase activity0.00E+00
16GO:0004823: leucine-tRNA ligase activity0.00E+00
17GO:0004326: tetrahydrofolylpolyglutamate synthase activity6.16E-06
18GO:0030570: pectate lyase activity1.73E-05
19GO:0002161: aminoacyl-tRNA editing activity2.16E-05
20GO:0003747: translation release factor activity2.63E-05
21GO:0016829: lyase activity4.18E-05
22GO:0001872: (1->3)-beta-D-glucan binding4.74E-05
23GO:0016149: translation release factor activity, codon specific4.74E-05
24GO:0004176: ATP-dependent peptidase activity2.26E-04
25GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.70E-04
26GO:0052857: NADPHX epimerase activity3.70E-04
27GO:0010285: L,L-diaminopimelate aminotransferase activity3.70E-04
28GO:0004733: pyridoxamine-phosphate oxidase activity3.70E-04
29GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.70E-04
30GO:0051777: ent-kaurenoate oxidase activity3.70E-04
31GO:0004813: alanine-tRNA ligase activity3.70E-04
32GO:0004853: uroporphyrinogen decarboxylase activity3.70E-04
33GO:0052856: NADHX epimerase activity3.70E-04
34GO:0008237: metallopeptidase activity7.99E-04
35GO:0015172: acidic amino acid transmembrane transporter activity8.05E-04
36GO:0009977: proton motive force dependent protein transmembrane transporter activity8.05E-04
37GO:0003919: FMN adenylyltransferase activity8.05E-04
38GO:0000049: tRNA binding1.10E-03
39GO:0052692: raffinose alpha-galactosidase activity1.30E-03
40GO:0004180: carboxypeptidase activity1.30E-03
41GO:0070330: aromatase activity1.30E-03
42GO:0004557: alpha-galactosidase activity1.30E-03
43GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.88E-03
44GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity1.88E-03
45GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.88E-03
46GO:0015175: neutral amino acid transmembrane transporter activity1.88E-03
47GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.88E-03
48GO:0005528: FK506 binding1.93E-03
49GO:0008891: glycolate oxidase activity2.52E-03
50GO:0046556: alpha-L-arabinofuranosidase activity2.52E-03
51GO:0004335: galactokinase activity2.52E-03
52GO:0004659: prenyltransferase activity2.52E-03
53GO:0001053: plastid sigma factor activity2.52E-03
54GO:0004045: aminoacyl-tRNA hydrolase activity2.52E-03
55GO:0016987: sigma factor activity2.52E-03
56GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.52E-03
57GO:0009044: xylan 1,4-beta-xylosidase activity2.52E-03
58GO:0019199: transmembrane receptor protein kinase activity2.52E-03
59GO:0042277: peptide binding2.52E-03
60GO:0018685: alkane 1-monooxygenase activity3.23E-03
61GO:0004040: amidase activity3.23E-03
62GO:0004812: aminoacyl-tRNA ligase activity3.30E-03
63GO:0004605: phosphatidate cytidylyltransferase activity3.99E-03
64GO:0004332: fructose-bisphosphate aldolase activity3.99E-03
65GO:0042578: phosphoric ester hydrolase activity3.99E-03
66GO:0010181: FMN binding4.13E-03
67GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.81E-03
68GO:0003730: mRNA 3'-UTR binding4.81E-03
69GO:0004144: diacylglycerol O-acyltransferase activity4.81E-03
70GO:0019899: enzyme binding5.68E-03
71GO:0016791: phosphatase activity5.75E-03
72GO:0016597: amino acid binding6.48E-03
73GO:0043022: ribosome binding6.61E-03
74GO:0019843: rRNA binding7.34E-03
75GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity7.58E-03
76GO:0030247: polysaccharide binding8.10E-03
77GO:0008236: serine-type peptidase activity8.53E-03
78GO:0005381: iron ion transmembrane transporter activity9.67E-03
79GO:0004222: metalloendopeptidase activity9.91E-03
80GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.01E-02
81GO:0004805: trehalose-phosphatase activity1.08E-02
82GO:0004713: protein tyrosine kinase activity1.08E-02
83GO:0008327: methyl-CpG binding1.19E-02
84GO:0047372: acylglycerol lipase activity1.19E-02
85GO:0004519: endonuclease activity1.30E-02
86GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.34E-02
87GO:0004089: carbonate dehydratase activity1.44E-02
88GO:0005262: calcium channel activity1.44E-02
89GO:0004565: beta-galactosidase activity1.44E-02
90GO:0015266: protein channel activity1.44E-02
91GO:0004185: serine-type carboxypeptidase activity1.47E-02
92GO:0008083: growth factor activity1.57E-02
93GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.57E-02
94GO:0043621: protein self-association1.60E-02
95GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.72E-02
96GO:0005525: GTP binding1.95E-02
97GO:0016788: hydrolase activity, acting on ester bonds1.97E-02
98GO:0051087: chaperone binding2.12E-02
99GO:0015171: amino acid transmembrane transporter activity2.21E-02
100GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.42E-02
101GO:0003727: single-stranded RNA binding2.73E-02
102GO:0052689: carboxylic ester hydrolase activity2.86E-02
103GO:0003924: GTPase activity4.09E-02
104GO:0008483: transaminase activity4.49E-02
105GO:0015250: water channel activity4.87E-02
106GO:0005524: ATP binding4.99E-02
<
Gene type



Gene DE type