GO Enrichment Analysis of Co-expressed Genes with
AT1G24310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008064: regulation of actin polymerization or depolymerization | 0.00E+00 |
| 2 | GO:0051493: regulation of cytoskeleton organization | 0.00E+00 |
| 3 | GO:0033206: meiotic cytokinesis | 4.31E-05 |
| 4 | GO:0010424: DNA methylation on cytosine within a CG sequence | 1.07E-04 |
| 5 | GO:0090309: positive regulation of methylation-dependent chromatin silencing | 1.07E-04 |
| 6 | GO:0032776: DNA methylation on cytosine | 1.84E-04 |
| 7 | GO:1904278: positive regulation of wax biosynthetic process | 1.84E-04 |
| 8 | GO:0006168: adenine salvage | 2.70E-04 |
| 9 | GO:0006166: purine ribonucleoside salvage | 2.70E-04 |
| 10 | GO:0006808: regulation of nitrogen utilization | 3.64E-04 |
| 11 | GO:1900864: mitochondrial RNA modification | 3.64E-04 |
| 12 | GO:0071249: cellular response to nitrate | 3.64E-04 |
| 13 | GO:0016131: brassinosteroid metabolic process | 4.63E-04 |
| 14 | GO:0006097: glyoxylate cycle | 4.63E-04 |
| 15 | GO:0044209: AMP salvage | 4.63E-04 |
| 16 | GO:0035435: phosphate ion transmembrane transport | 5.67E-04 |
| 17 | GO:0048444: floral organ morphogenesis | 6.76E-04 |
| 18 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 6.76E-04 |
| 19 | GO:2000033: regulation of seed dormancy process | 6.76E-04 |
| 20 | GO:0010098: suspensor development | 7.90E-04 |
| 21 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 7.90E-04 |
| 22 | GO:0010374: stomatal complex development | 7.90E-04 |
| 23 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 9.08E-04 |
| 24 | GO:0010928: regulation of auxin mediated signaling pathway | 9.08E-04 |
| 25 | GO:0010052: guard cell differentiation | 1.03E-03 |
| 26 | GO:0007186: G-protein coupled receptor signaling pathway | 1.03E-03 |
| 27 | GO:0010233: phloem transport | 1.03E-03 |
| 28 | GO:0006261: DNA-dependent DNA replication | 1.03E-03 |
| 29 | GO:0016441: posttranscriptional gene silencing | 1.43E-03 |
| 30 | GO:0010216: maintenance of DNA methylation | 1.57E-03 |
| 31 | GO:0010152: pollen maturation | 1.72E-03 |
| 32 | GO:0046274: lignin catabolic process | 1.87E-03 |
| 33 | GO:0010102: lateral root morphogenesis | 1.87E-03 |
| 34 | GO:0009934: regulation of meristem structural organization | 2.03E-03 |
| 35 | GO:0010020: chloroplast fission | 2.03E-03 |
| 36 | GO:0006270: DNA replication initiation | 2.03E-03 |
| 37 | GO:2000377: regulation of reactive oxygen species metabolic process | 2.52E-03 |
| 38 | GO:0000027: ribosomal large subunit assembly | 2.52E-03 |
| 39 | GO:0009863: salicylic acid mediated signaling pathway | 2.52E-03 |
| 40 | GO:0010187: negative regulation of seed germination | 2.52E-03 |
| 41 | GO:0051302: regulation of cell division | 2.70E-03 |
| 42 | GO:0006874: cellular calcium ion homeostasis | 2.70E-03 |
| 43 | GO:0048443: stamen development | 3.43E-03 |
| 44 | GO:0080022: primary root development | 3.82E-03 |
| 45 | GO:0010501: RNA secondary structure unwinding | 3.82E-03 |
| 46 | GO:0009658: chloroplast organization | 3.88E-03 |
| 47 | GO:0008360: regulation of cell shape | 4.02E-03 |
| 48 | GO:0009958: positive gravitropism | 4.02E-03 |
| 49 | GO:0009741: response to brassinosteroid | 4.02E-03 |
| 50 | GO:0010268: brassinosteroid homeostasis | 4.02E-03 |
| 51 | GO:0007264: small GTPase mediated signal transduction | 4.86E-03 |
| 52 | GO:0010029: regulation of seed germination | 6.21E-03 |
| 53 | GO:0010218: response to far red light | 7.69E-03 |
| 54 | GO:0006811: ion transport | 7.69E-03 |
| 55 | GO:0048527: lateral root development | 7.95E-03 |
| 56 | GO:0009867: jasmonic acid mediated signaling pathway | 8.47E-03 |
| 57 | GO:0006099: tricarboxylic acid cycle | 8.74E-03 |
| 58 | GO:0006260: DNA replication | 1.16E-02 |
| 59 | GO:0042538: hyperosmotic salinity response | 1.19E-02 |
| 60 | GO:0006364: rRNA processing | 1.25E-02 |
| 61 | GO:0009416: response to light stimulus | 1.26E-02 |
| 62 | GO:0009740: gibberellic acid mediated signaling pathway | 1.54E-02 |
| 63 | GO:0016569: covalent chromatin modification | 1.54E-02 |
| 64 | GO:0006396: RNA processing | 1.64E-02 |
| 65 | GO:0051726: regulation of cell cycle | 1.67E-02 |
| 66 | GO:0009058: biosynthetic process | 1.95E-02 |
| 67 | GO:0040008: regulation of growth | 2.29E-02 |
| 68 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.44E-02 |
| 69 | GO:0009739: response to gibberellin | 2.56E-02 |
| 70 | GO:0006970: response to osmotic stress | 3.40E-02 |
| 71 | GO:0007049: cell cycle | 3.49E-02 |
| 72 | GO:0009723: response to ethylene | 3.58E-02 |
| 73 | GO:0016192: vesicle-mediated transport | 3.89E-02 |
| 74 | GO:0006869: lipid transport | 4.56E-02 |
| 75 | GO:0032259: methylation | 4.81E-02 |
| 76 | GO:0006629: lipid metabolic process | 4.95E-02 |
| 77 | GO:0006281: DNA repair | 4.95E-02 |
| 78 | GO:0007275: multicellular organism development | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004808: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity | 0.00E+00 |
| 2 | GO:0004474: malate synthase activity | 0.00E+00 |
| 3 | GO:0008395: steroid hydroxylase activity | 4.31E-05 |
| 4 | GO:0010429: methyl-CpNpN binding | 1.84E-04 |
| 5 | GO:0010428: methyl-CpNpG binding | 1.84E-04 |
| 6 | GO:0003999: adenine phosphoribosyltransferase activity | 2.70E-04 |
| 7 | GO:0010011: auxin binding | 3.64E-04 |
| 8 | GO:0004930: G-protein coupled receptor activity | 3.64E-04 |
| 9 | GO:0003688: DNA replication origin binding | 5.67E-04 |
| 10 | GO:0003697: single-stranded DNA binding | 6.25E-04 |
| 11 | GO:0000989: transcription factor activity, transcription factor binding | 1.16E-03 |
| 12 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.57E-03 |
| 13 | GO:0008327: methyl-CpG binding | 1.57E-03 |
| 14 | GO:0052716: hydroquinone:oxygen oxidoreductase activity | 1.72E-03 |
| 15 | GO:0015114: phosphate ion transmembrane transporter activity | 1.87E-03 |
| 16 | GO:0004970: ionotropic glutamate receptor activity | 2.19E-03 |
| 17 | GO:0005217: intracellular ligand-gated ion channel activity | 2.19E-03 |
| 18 | GO:0004527: exonuclease activity | 4.02E-03 |
| 19 | GO:0010181: FMN binding | 4.23E-03 |
| 20 | GO:0019901: protein kinase binding | 4.43E-03 |
| 21 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 5.52E-03 |
| 22 | GO:0004004: ATP-dependent RNA helicase activity | 6.69E-03 |
| 23 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 7.69E-03 |
| 24 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 9.01E-03 |
| 25 | GO:0003690: double-stranded DNA binding | 1.28E-02 |
| 26 | GO:0016298: lipase activity | 1.28E-02 |
| 27 | GO:0016874: ligase activity | 1.54E-02 |
| 28 | GO:0008026: ATP-dependent helicase activity | 1.67E-02 |
| 29 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.91E-02 |
| 30 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 2.50E-02 |
| 31 | GO:0008168: methyltransferase activity | 3.14E-02 |
| 32 | GO:0046983: protein dimerization activity | 3.41E-02 |
| 33 | GO:0004842: ubiquitin-protein transferase activity | 3.53E-02 |
| 34 | GO:0003729: mRNA binding | 3.80E-02 |
| 35 | GO:0061630: ubiquitin protein ligase activity | 3.89E-02 |