GO Enrichment Analysis of Co-expressed Genes with
AT1G24290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 2 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 3 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 4 | GO:0090615: mitochondrial mRNA processing | 0.00E+00 |
| 5 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 6 | GO:0006518: peptide metabolic process | 2.83E-06 |
| 7 | GO:0009102: biotin biosynthetic process | 6.65E-06 |
| 8 | GO:0006479: protein methylation | 1.25E-05 |
| 9 | GO:0010541: acropetal auxin transport | 2.82E-04 |
| 10 | GO:0080009: mRNA methylation | 2.82E-04 |
| 11 | GO:0051214: RNA virus induced gene silencing | 2.82E-04 |
| 12 | GO:1901529: positive regulation of anion channel activity | 2.82E-04 |
| 13 | GO:0010569: regulation of double-strand break repair via homologous recombination | 2.82E-04 |
| 14 | GO:0048731: system development | 2.82E-04 |
| 15 | GO:0030029: actin filament-based process | 4.65E-04 |
| 16 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 4.65E-04 |
| 17 | GO:0010371: regulation of gibberellin biosynthetic process | 6.66E-04 |
| 18 | GO:0007276: gamete generation | 6.66E-04 |
| 19 | GO:0006221: pyrimidine nucleotide biosynthetic process | 8.84E-04 |
| 20 | GO:0042793: transcription from plastid promoter | 1.37E-03 |
| 21 | GO:0009643: photosynthetic acclimation | 1.37E-03 |
| 22 | GO:0009959: negative gravitropism | 1.37E-03 |
| 23 | GO:0016554: cytidine to uridine editing | 1.37E-03 |
| 24 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.64E-03 |
| 25 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.64E-03 |
| 26 | GO:0010310: regulation of hydrogen peroxide metabolic process | 1.64E-03 |
| 27 | GO:0010492: maintenance of shoot apical meristem identity | 2.22E-03 |
| 28 | GO:0009642: response to light intensity | 2.22E-03 |
| 29 | GO:0042255: ribosome assembly | 2.22E-03 |
| 30 | GO:0006353: DNA-templated transcription, termination | 2.22E-03 |
| 31 | GO:0019430: removal of superoxide radicals | 2.54E-03 |
| 32 | GO:0001510: RNA methylation | 2.54E-03 |
| 33 | GO:0048589: developmental growth | 2.87E-03 |
| 34 | GO:0010267: production of ta-siRNAs involved in RNA interference | 3.21E-03 |
| 35 | GO:0006349: regulation of gene expression by genetic imprinting | 3.21E-03 |
| 36 | GO:0016571: histone methylation | 3.21E-03 |
| 37 | GO:0016573: histone acetylation | 3.21E-03 |
| 38 | GO:1900865: chloroplast RNA modification | 3.21E-03 |
| 39 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.47E-03 |
| 40 | GO:0006535: cysteine biosynthetic process from serine | 3.57E-03 |
| 41 | GO:0030422: production of siRNA involved in RNA interference | 3.57E-03 |
| 42 | GO:0048829: root cap development | 3.57E-03 |
| 43 | GO:0006949: syncytium formation | 3.57E-03 |
| 44 | GO:0010048: vernalization response | 3.57E-03 |
| 45 | GO:0009750: response to fructose | 3.94E-03 |
| 46 | GO:0010216: maintenance of DNA methylation | 3.94E-03 |
| 47 | GO:0010152: pollen maturation | 4.32E-03 |
| 48 | GO:0012501: programmed cell death | 4.32E-03 |
| 49 | GO:0010588: cotyledon vascular tissue pattern formation | 4.71E-03 |
| 50 | GO:0010102: lateral root morphogenesis | 4.71E-03 |
| 51 | GO:0048367: shoot system development | 4.90E-03 |
| 52 | GO:0009887: animal organ morphogenesis | 5.12E-03 |
| 53 | GO:0010540: basipetal auxin transport | 5.12E-03 |
| 54 | GO:0009266: response to temperature stimulus | 5.12E-03 |
| 55 | GO:0048768: root hair cell tip growth | 5.12E-03 |
| 56 | GO:0010020: chloroplast fission | 5.12E-03 |
| 57 | GO:0016569: covalent chromatin modification | 5.37E-03 |
| 58 | GO:0080188: RNA-directed DNA methylation | 5.54E-03 |
| 59 | GO:0006396: RNA processing | 5.87E-03 |
| 60 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.98E-03 |
| 61 | GO:0019344: cysteine biosynthetic process | 6.42E-03 |
| 62 | GO:0006338: chromatin remodeling | 6.42E-03 |
| 63 | GO:0003333: amino acid transmembrane transport | 7.34E-03 |
| 64 | GO:0010431: seed maturation | 7.34E-03 |
| 65 | GO:0009793: embryo development ending in seed dormancy | 7.38E-03 |
| 66 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 8.30E-03 |
| 67 | GO:0009734: auxin-activated signaling pathway | 8.41E-03 |
| 68 | GO:0042127: regulation of cell proliferation | 8.80E-03 |
| 69 | GO:0048443: stamen development | 8.80E-03 |
| 70 | GO:0040008: regulation of growth | 9.41E-03 |
| 71 | GO:0080022: primary root development | 9.83E-03 |
| 72 | GO:0008033: tRNA processing | 9.83E-03 |
| 73 | GO:0010087: phloem or xylem histogenesis | 9.83E-03 |
| 74 | GO:0009908: flower development | 9.92E-03 |
| 75 | GO:0009960: endosperm development | 1.04E-02 |
| 76 | GO:0010305: leaf vascular tissue pattern formation | 1.04E-02 |
| 77 | GO:0009749: response to glucose | 1.15E-02 |
| 78 | GO:0008380: RNA splicing | 1.18E-02 |
| 79 | GO:0080156: mitochondrial mRNA modification | 1.20E-02 |
| 80 | GO:0031047: gene silencing by RNA | 1.26E-02 |
| 81 | GO:0051301: cell division | 1.26E-02 |
| 82 | GO:0006355: regulation of transcription, DNA-templated | 1.32E-02 |
| 83 | GO:0030163: protein catabolic process | 1.32E-02 |
| 84 | GO:0009639: response to red or far red light | 1.38E-02 |
| 85 | GO:0009828: plant-type cell wall loosening | 1.38E-02 |
| 86 | GO:0019760: glucosinolate metabolic process | 1.38E-02 |
| 87 | GO:0051607: defense response to virus | 1.50E-02 |
| 88 | GO:0007049: cell cycle | 1.71E-02 |
| 89 | GO:0016311: dephosphorylation | 1.82E-02 |
| 90 | GO:0080167: response to karrikin | 1.90E-02 |
| 91 | GO:0009910: negative regulation of flower development | 2.09E-02 |
| 92 | GO:0006865: amino acid transport | 2.16E-02 |
| 93 | GO:0008283: cell proliferation | 2.67E-02 |
| 94 | GO:0009744: response to sucrose | 2.67E-02 |
| 95 | GO:0009664: plant-type cell wall organization | 3.14E-02 |
| 96 | GO:0006351: transcription, DNA-templated | 3.16E-02 |
| 97 | GO:0009733: response to auxin | 3.17E-02 |
| 98 | GO:0009736: cytokinin-activated signaling pathway | 3.30E-02 |
| 99 | GO:0006364: rRNA processing | 3.30E-02 |
| 100 | GO:0006417: regulation of translation | 3.55E-02 |
| 101 | GO:0009740: gibberellic acid mediated signaling pathway | 4.06E-02 |
| 102 | GO:0051726: regulation of cell cycle | 4.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008710: 8-amino-7-oxononanoate synthase activity | 0.00E+00 |
| 2 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 3 | GO:0016428: tRNA (cytosine-5-)-methyltransferase activity | 0.00E+00 |
| 4 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 5 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 6 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 7 | GO:0003723: RNA binding | 1.93E-05 |
| 8 | GO:0016274: protein-arginine N-methyltransferase activity | 1.22E-04 |
| 9 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.22E-04 |
| 10 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.22E-04 |
| 11 | GO:0003725: double-stranded RNA binding | 2.65E-04 |
| 12 | GO:0042389: omega-3 fatty acid desaturase activity | 2.82E-04 |
| 13 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 2.82E-04 |
| 14 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 2.82E-04 |
| 15 | GO:0003727: single-stranded RNA binding | 6.53E-04 |
| 16 | GO:0009041: uridylate kinase activity | 6.66E-04 |
| 17 | GO:0010011: auxin binding | 8.84E-04 |
| 18 | GO:0010328: auxin influx transmembrane transporter activity | 8.84E-04 |
| 19 | GO:0030170: pyridoxal phosphate binding | 1.11E-03 |
| 20 | GO:0004784: superoxide dismutase activity | 1.37E-03 |
| 21 | GO:0004124: cysteine synthase activity | 1.64E-03 |
| 22 | GO:0004222: metalloendopeptidase activity | 2.03E-03 |
| 23 | GO:0004525: ribonuclease III activity | 2.22E-03 |
| 24 | GO:0008168: methyltransferase activity | 2.41E-03 |
| 25 | GO:0008173: RNA methyltransferase activity | 2.54E-03 |
| 26 | GO:0003724: RNA helicase activity | 2.54E-03 |
| 27 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.54E-03 |
| 28 | GO:0003779: actin binding | 5.54E-03 |
| 29 | GO:0004190: aspartic-type endopeptidase activity | 5.54E-03 |
| 30 | GO:0004519: endonuclease activity | 6.05E-03 |
| 31 | GO:0003676: nucleic acid binding | 6.53E-03 |
| 32 | GO:0030570: pectate lyase activity | 8.30E-03 |
| 33 | GO:0005102: receptor binding | 9.31E-03 |
| 34 | GO:0018024: histone-lysine N-methyltransferase activity | 9.31E-03 |
| 35 | GO:0019901: protein kinase binding | 1.15E-02 |
| 36 | GO:0048038: quinone binding | 1.20E-02 |
| 37 | GO:0004672: protein kinase activity | 1.25E-02 |
| 38 | GO:0005200: structural constituent of cytoskeleton | 1.44E-02 |
| 39 | GO:0008483: transaminase activity | 1.44E-02 |
| 40 | GO:0005515: protein binding | 1.66E-02 |
| 41 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.02E-02 |
| 42 | GO:0003993: acid phosphatase activity | 2.30E-02 |
| 43 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.44E-02 |
| 44 | GO:0004674: protein serine/threonine kinase activity | 2.69E-02 |
| 45 | GO:0015293: symporter activity | 2.90E-02 |
| 46 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 2.95E-02 |
| 47 | GO:0003690: double-stranded DNA binding | 3.38E-02 |
| 48 | GO:0015171: amino acid transmembrane transporter activity | 3.55E-02 |
| 49 | GO:0008026: ATP-dependent helicase activity | 4.42E-02 |
| 50 | GO:0004386: helicase activity | 4.51E-02 |
| 51 | GO:0019843: rRNA binding | 4.97E-02 |