Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G23880

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090355: positive regulation of auxin metabolic process0.00E+00
2GO:0009661: chromoplast organization0.00E+00
3GO:0090358: positive regulation of tryptophan metabolic process0.00E+00
4GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
5GO:0006573: valine metabolic process0.00E+00
6GO:0006551: leucine metabolic process5.03E-05
7GO:1904143: positive regulation of carotenoid biosynthetic process1.23E-04
8GO:0006898: receptor-mediated endocytosis1.23E-04
9GO:0006696: ergosterol biosynthetic process2.11E-04
10GO:0015695: organic cation transport2.11E-04
11GO:0090308: regulation of methylation-dependent chromatin silencing3.09E-04
12GO:0045338: farnesyl diphosphate metabolic process3.09E-04
13GO:1990019: protein storage vacuole organization3.09E-04
14GO:0071483: cellular response to blue light4.15E-04
15GO:0009755: hormone-mediated signaling pathway4.15E-04
16GO:0072488: ammonium transmembrane transport4.15E-04
17GO:0009904: chloroplast accumulation movement5.26E-04
18GO:0010438: cellular response to sulfur starvation5.26E-04
19GO:0016120: carotene biosynthetic process5.26E-04
20GO:0010315: auxin efflux6.44E-04
21GO:0009082: branched-chain amino acid biosynthetic process7.68E-04
22GO:0009099: valine biosynthetic process7.68E-04
23GO:0009903: chloroplast avoidance movement7.68E-04
24GO:0009554: megasporogenesis7.68E-04
25GO:0009854: oxidative photosynthetic carbon pathway7.68E-04
26GO:0010019: chloroplast-nucleus signaling pathway7.68E-04
27GO:0031930: mitochondria-nucleus signaling pathway7.68E-04
28GO:1900056: negative regulation of leaf senescence8.97E-04
29GO:0010439: regulation of glucosinolate biosynthetic process1.03E-03
30GO:2000070: regulation of response to water deprivation1.03E-03
31GO:0050821: protein stabilization1.03E-03
32GO:0009819: drought recovery1.03E-03
33GO:0009097: isoleucine biosynthetic process1.17E-03
34GO:0006526: arginine biosynthetic process1.17E-03
35GO:0048354: mucilage biosynthetic process involved in seed coat development1.47E-03
36GO:0010380: regulation of chlorophyll biosynthetic process1.47E-03
37GO:0009641: shade avoidance1.63E-03
38GO:0010192: mucilage biosynthetic process1.63E-03
39GO:0031627: telomeric loop formation1.63E-03
40GO:0051555: flavonol biosynthetic process1.63E-03
41GO:0043085: positive regulation of catalytic activity1.79E-03
42GO:0010216: maintenance of DNA methylation1.79E-03
43GO:0009682: induced systemic resistance1.79E-03
44GO:0010105: negative regulation of ethylene-activated signaling pathway1.96E-03
45GO:0007015: actin filament organization2.32E-03
46GO:0010223: secondary shoot formation2.32E-03
47GO:0000162: tryptophan biosynthetic process2.69E-03
48GO:0019915: lipid storage3.29E-03
49GO:0009617: response to bacterium3.66E-03
50GO:0009294: DNA mediated transformation3.71E-03
51GO:0071369: cellular response to ethylene stimulus3.71E-03
52GO:0009625: response to insect3.71E-03
53GO:0019722: calcium-mediated signaling3.93E-03
54GO:0009826: unidimensional cell growth4.55E-03
55GO:0009851: auxin biosynthetic process5.07E-03
56GO:0048510: regulation of timing of transition from vegetative to reproductive phase5.32E-03
57GO:0032502: developmental process5.56E-03
58GO:0071555: cell wall organization6.18E-03
59GO:0007267: cell-cell signaling6.33E-03
60GO:0016126: sterol biosynthetic process6.85E-03
61GO:0015995: chlorophyll biosynthetic process7.68E-03
62GO:0030244: cellulose biosynthetic process8.24E-03
63GO:0009834: plant-type secondary cell wall biogenesis8.82E-03
64GO:0009910: negative regulation of flower development9.12E-03
65GO:0009867: jasmonic acid mediated signaling pathway9.73E-03
66GO:0009853: photorespiration9.73E-03
67GO:0009640: photomorphogenesis1.16E-02
68GO:0009644: response to high light intensity1.23E-02
69GO:0009664: plant-type cell wall organization1.37E-02
70GO:0006857: oligopeptide transport1.51E-02
71GO:0048367: shoot system development1.65E-02
72GO:0009740: gibberellic acid mediated signaling pathway1.77E-02
73GO:0045893: positive regulation of transcription, DNA-templated1.77E-02
74GO:0016569: covalent chromatin modification1.77E-02
75GO:0042744: hydrogen peroxide catabolic process2.37E-02
76GO:0040008: regulation of growth2.63E-02
77GO:0009739: response to gibberellin2.95E-02
78GO:0009658: chloroplast organization3.71E-02
79GO:0048366: leaf development4.17E-02
80GO:0080167: response to karrikin4.32E-02
81GO:0006810: transport4.56E-02
82GO:0045892: negative regulation of transcription, DNA-templated4.97E-02
RankGO TermAdjusted P value
1GO:0004055: argininosuccinate synthase activity0.00E+00
2GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
3GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity5.03E-05
4GO:0016618: hydroxypyruvate reductase activity5.03E-05
5GO:0003984: acetolactate synthase activity5.03E-05
6GO:0046906: tetrapyrrole binding5.03E-05
7GO:0047259: glucomannan 4-beta-mannosyltransferase activity5.03E-05
8GO:0004310: farnesyl-diphosphate farnesyltransferase activity1.23E-04
9GO:0030267: glyoxylate reductase (NADP) activity2.11E-04
10GO:0080032: methyl jasmonate esterase activity4.15E-04
11GO:0008519: ammonium transmembrane transporter activity6.44E-04
12GO:0080030: methyl indole-3-acetate esterase activity6.44E-04
13GO:0051753: mannan synthase activity7.68E-04
14GO:0019899: enzyme binding8.97E-04
15GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity1.17E-03
16GO:0103095: wax ester synthase activity1.17E-03
17GO:0022857: transmembrane transporter activity1.69E-03
18GO:0003691: double-stranded telomeric DNA binding1.79E-03
19GO:0016788: hydrolase activity, acting on ester bonds4.82E-03
20GO:0016759: cellulose synthase activity6.07E-03
21GO:0016597: amino acid binding6.59E-03
22GO:0051287: NAD binding1.33E-02
23GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.65E-02
24GO:0080043: quercetin 3-O-glucosyltransferase activity1.73E-02
25GO:0080044: quercetin 7-O-glucosyltransferase activity1.73E-02
26GO:0016746: transferase activity, transferring acyl groups1.88E-02
27GO:0008017: microtubule binding2.81E-02
28GO:0016757: transferase activity, transferring glycosyl groups2.90E-02
29GO:0008194: UDP-glycosyltransferase activity2.95E-02
30GO:0004601: peroxidase activity3.71E-02
31GO:0016491: oxidoreductase activity4.09E-02
32GO:0061630: ubiquitin protein ligase activity4.48E-02
33GO:0004674: protein serine/threonine kinase activity4.58E-02
34GO:0052689: carboxylic ester hydrolase activity4.64E-02
35GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.91E-02
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Gene type



Gene DE type