Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G23740

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006982: response to lipid hydroperoxide0.00E+00
2GO:0010335: response to non-ionic osmotic stress0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0033231: carbohydrate export0.00E+00
5GO:0033468: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
6GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
7GO:0005996: monosaccharide metabolic process0.00E+00
8GO:0006573: valine metabolic process0.00E+00
9GO:0015717: triose phosphate transport0.00E+00
10GO:0009103: lipopolysaccharide biosynthetic process0.00E+00
11GO:0046471: phosphatidylglycerol metabolic process0.00E+00
12GO:1905157: positive regulation of photosynthesis0.00E+00
13GO:0030388: fructose 1,6-bisphosphate metabolic process2.41E-06
14GO:0006000: fructose metabolic process8.79E-06
15GO:0042823: pyridoxal phosphate biosynthetic process2.00E-05
16GO:0055114: oxidation-reduction process2.63E-05
17GO:0006094: gluconeogenesis2.90E-05
18GO:0019253: reductive pentose-phosphate cycle3.55E-05
19GO:0006636: unsaturated fatty acid biosynthetic process5.10E-05
20GO:0009643: photosynthetic acclimation8.60E-05
21GO:0009772: photosynthetic electron transport in photosystem II1.57E-04
22GO:0009704: de-etiolation2.00E-04
23GO:0019510: S-adenosylhomocysteine catabolic process2.27E-04
24GO:1902334: fructose export from vacuole to cytoplasm2.27E-04
25GO:0000476: maturation of 4.5S rRNA2.27E-04
26GO:0000967: rRNA 5'-end processing2.27E-04
27GO:0015755: fructose transport2.27E-04
28GO:0046467: membrane lipid biosynthetic process2.27E-04
29GO:0046900: tetrahydrofolylpolyglutamate metabolic process2.27E-04
30GO:1904966: positive regulation of vitamin E biosynthetic process2.27E-04
31GO:0051775: response to redox state2.27E-04
32GO:0071277: cellular response to calcium ion2.27E-04
33GO:1904964: positive regulation of phytol biosynthetic process2.27E-04
34GO:0006551: leucine metabolic process2.27E-04
35GO:0042371: vitamin K biosynthetic process2.27E-04
36GO:0046167: glycerol-3-phosphate biosynthetic process2.27E-04
37GO:0043007: maintenance of rDNA2.27E-04
38GO:0006002: fructose 6-phosphate metabolic process2.48E-04
39GO:0009658: chloroplast organization2.86E-04
40GO:0044550: secondary metabolite biosynthetic process4.98E-04
41GO:0015790: UDP-xylose transport5.05E-04
42GO:0034470: ncRNA processing5.05E-04
43GO:0042819: vitamin B6 biosynthetic process5.05E-04
44GO:0033353: S-adenosylmethionine cycle5.05E-04
45GO:1902326: positive regulation of chlorophyll biosynthetic process5.05E-04
46GO:0006898: receptor-mediated endocytosis5.05E-04
47GO:0010541: acropetal auxin transport5.05E-04
48GO:0006650: glycerophospholipid metabolic process5.05E-04
49GO:0015979: photosynthesis5.43E-04
50GO:0005986: sucrose biosynthetic process6.27E-04
51GO:0010207: photosystem II assembly7.06E-04
52GO:0032259: methylation7.93E-04
53GO:0046168: glycerol-3-phosphate catabolic process8.21E-04
54GO:0010160: formation of animal organ boundary8.21E-04
55GO:0035436: triose phosphate transmembrane transport8.21E-04
56GO:0006696: ergosterol biosynthetic process8.21E-04
57GO:0071484: cellular response to light intensity1.17E-03
58GO:0006107: oxaloacetate metabolic process1.17E-03
59GO:0043481: anthocyanin accumulation in tissues in response to UV light1.17E-03
60GO:0006072: glycerol-3-phosphate metabolic process1.17E-03
61GO:0008615: pyridoxine biosynthetic process1.17E-03
62GO:0015976: carbon utilization1.56E-03
63GO:0015689: molybdate ion transport1.56E-03
64GO:0009765: photosynthesis, light harvesting1.56E-03
65GO:0045727: positive regulation of translation1.56E-03
66GO:0015994: chlorophyll metabolic process1.56E-03
67GO:0031122: cytoplasmic microtubule organization1.56E-03
68GO:0006546: glycine catabolic process1.56E-03
69GO:0010600: regulation of auxin biosynthetic process1.56E-03
70GO:0015713: phosphoglycerate transport1.56E-03
71GO:0071483: cellular response to blue light1.56E-03
72GO:0006734: NADH metabolic process1.56E-03
73GO:0016123: xanthophyll biosynthetic process1.99E-03
74GO:0009904: chloroplast accumulation movement1.99E-03
75GO:0009646: response to absence of light2.03E-03
76GO:0019252: starch biosynthetic process2.18E-03
77GO:0060918: auxin transport2.45E-03
78GO:1902456: regulation of stomatal opening2.45E-03
79GO:0009082: branched-chain amino acid biosynthetic process2.94E-03
80GO:0010244: response to low fluence blue light stimulus by blue low-fluence system2.94E-03
81GO:0017148: negative regulation of translation2.94E-03
82GO:0009099: valine biosynthetic process2.94E-03
83GO:0009903: chloroplast avoidance movement2.94E-03
84GO:0009854: oxidative photosynthetic carbon pathway2.94E-03
85GO:0010019: chloroplast-nucleus signaling pathway2.94E-03
86GO:1900056: negative regulation of leaf senescence3.47E-03
87GO:1900057: positive regulation of leaf senescence3.47E-03
88GO:0010161: red light signaling pathway3.47E-03
89GO:0015995: chlorophyll biosynthetic process3.95E-03
90GO:0010928: regulation of auxin mediated signaling pathway4.02E-03
91GO:0008610: lipid biosynthetic process4.02E-03
92GO:0005978: glycogen biosynthetic process4.02E-03
93GO:0000105: histidine biosynthetic process4.02E-03
94GO:0009231: riboflavin biosynthetic process4.02E-03
95GO:0030244: cellulose biosynthetic process4.38E-03
96GO:0007623: circadian rhythm4.43E-03
97GO:0009932: cell tip growth4.60E-03
98GO:0009657: plastid organization4.60E-03
99GO:0009097: isoleucine biosynthetic process4.60E-03
100GO:0032544: plastid translation4.60E-03
101GO:2000031: regulation of salicylic acid mediated signaling pathway4.60E-03
102GO:0009821: alkaloid biosynthetic process5.22E-03
103GO:0010206: photosystem II repair5.22E-03
104GO:0006098: pentose-phosphate shunt5.22E-03
105GO:0090333: regulation of stomatal closure5.22E-03
106GO:0006754: ATP biosynthetic process5.22E-03
107GO:0010205: photoinhibition5.85E-03
108GO:0010267: production of ta-siRNAs involved in RNA interference5.85E-03
109GO:0009098: leucine biosynthetic process5.85E-03
110GO:0048354: mucilage biosynthetic process involved in seed coat development5.85E-03
111GO:0010380: regulation of chlorophyll biosynthetic process5.85E-03
112GO:0010192: mucilage biosynthetic process6.51E-03
113GO:0006995: cellular response to nitrogen starvation6.51E-03
114GO:0019538: protein metabolic process6.51E-03
115GO:0009688: abscisic acid biosynthetic process6.51E-03
116GO:0010114: response to red light7.14E-03
117GO:0009744: response to sucrose7.14E-03
118GO:0019684: photosynthesis, light reaction7.20E-03
119GO:0043085: positive regulation of catalytic activity7.20E-03
120GO:0009773: photosynthetic electron transport in photosystem I7.20E-03
121GO:0000272: polysaccharide catabolic process7.20E-03
122GO:0009750: response to fructose7.20E-03
123GO:0018119: peptidyl-cysteine S-nitrosylation7.20E-03
124GO:0016485: protein processing7.20E-03
125GO:0008361: regulation of cell size7.92E-03
126GO:0002213: defense response to insect7.92E-03
127GO:0016925: protein sumoylation7.92E-03
128GO:0042742: defense response to bacterium8.01E-03
129GO:0071555: cell wall organization8.01E-03
130GO:0009725: response to hormone8.66E-03
131GO:0006108: malate metabolic process8.66E-03
132GO:0006006: glucose metabolic process8.66E-03
133GO:0018107: peptidyl-threonine phosphorylation8.66E-03
134GO:0042538: hyperosmotic salinity response8.97E-03
135GO:0006541: glutamine metabolic process9.42E-03
136GO:0007015: actin filament organization9.42E-03
137GO:0010540: basipetal auxin transport9.42E-03
138GO:0009585: red, far-red light phototransduction9.64E-03
139GO:0042343: indole glucosinolate metabolic process1.02E-02
140GO:0005985: sucrose metabolic process1.02E-02
141GO:0006857: oligopeptide transport1.03E-02
142GO:0019762: glucosinolate catabolic process1.10E-02
143GO:0006863: purine nucleobase transport1.10E-02
144GO:0009833: plant-type primary cell wall biogenesis1.10E-02
145GO:0006096: glycolytic process1.14E-02
146GO:0006406: mRNA export from nucleus1.19E-02
147GO:0019953: sexual reproduction1.27E-02
148GO:0009695: jasmonic acid biosynthetic process1.27E-02
149GO:0098542: defense response to other organism1.36E-02
150GO:0061077: chaperone-mediated protein folding1.36E-02
151GO:0031408: oxylipin biosynthetic process1.36E-02
152GO:0051260: protein homooligomerization1.36E-02
153GO:0006396: RNA processing1.42E-02
154GO:0030245: cellulose catabolic process1.45E-02
155GO:0010017: red or far-red light signaling pathway1.45E-02
156GO:2000022: regulation of jasmonic acid mediated signaling pathway1.45E-02
157GO:0030433: ubiquitin-dependent ERAD pathway1.45E-02
158GO:0006730: one-carbon metabolic process1.45E-02
159GO:0019748: secondary metabolic process1.45E-02
160GO:0071369: cellular response to ethylene stimulus1.54E-02
161GO:0016042: lipid catabolic process1.60E-02
162GO:0006817: phosphate ion transport1.64E-02
163GO:0048443: stamen development1.64E-02
164GO:0009306: protein secretion1.64E-02
165GO:0009408: response to heat1.66E-02
166GO:0016117: carotenoid biosynthetic process1.73E-02
167GO:0070417: cellular response to cold1.73E-02
168GO:0042631: cellular response to water deprivation1.83E-02
169GO:0009958: positive gravitropism1.93E-02
170GO:0006520: cellular amino acid metabolic process1.93E-02
171GO:0010182: sugar mediated signaling pathway1.93E-02
172GO:0007059: chromosome segregation2.03E-02
173GO:0015986: ATP synthesis coupled proton transport2.03E-02
174GO:0008654: phospholipid biosynthetic process2.14E-02
175GO:0007264: small GTPase mediated signal transduction2.35E-02
176GO:0031047: gene silencing by RNA2.35E-02
177GO:0009639: response to red or far red light2.57E-02
178GO:0006979: response to oxidative stress2.67E-02
179GO:0051607: defense response to virus2.80E-02
180GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.03E-02
181GO:0010411: xyloglucan metabolic process3.27E-02
182GO:0009555: pollen development3.41E-02
183GO:0018298: protein-chromophore linkage3.52E-02
184GO:0009813: flavonoid biosynthetic process3.65E-02
185GO:0006499: N-terminal protein myristoylation3.77E-02
186GO:0009407: toxin catabolic process3.77E-02
187GO:0010218: response to far red light3.77E-02
188GO:0009910: negative regulation of flower development3.90E-02
189GO:0048527: lateral root development3.90E-02
190GO:0009853: photorespiration4.17E-02
191GO:0016051: carbohydrate biosynthetic process4.17E-02
192GO:0009637: response to blue light4.17E-02
193GO:0006099: tricarboxylic acid cycle4.30E-02
194GO:0034599: cellular response to oxidative stress4.30E-02
195GO:0055085: transmembrane transport4.57E-02
196GO:0006631: fatty acid metabolic process4.71E-02
197GO:0005975: carbohydrate metabolic process4.82E-02
198GO:0009640: photomorphogenesis4.98E-02
199GO:0009926: auxin polar transport4.98E-02
RankGO TermAdjusted P value
1GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
2GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
3GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
4GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
5GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
6GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
7GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
8GO:0008690: 3-deoxy-manno-octulosonate cytidylyltransferase activity0.00E+00
9GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
10GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
11GO:0046905: phytoene synthase activity0.00E+00
12GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
13GO:0004768: stearoyl-CoA 9-desaturase activity0.00E+00
14GO:0015284: fructose uniporter activity0.00E+00
15GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity2.41E-06
16GO:0018708: thiol S-methyltransferase activity2.41E-06
17GO:0051287: NAD binding1.19E-05
18GO:0019899: enzyme binding1.57E-04
19GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity2.27E-04
20GO:0046906: tetrapyrrole binding2.27E-04
21GO:0004013: adenosylhomocysteinase activity2.27E-04
22GO:0008568: microtubule-severing ATPase activity2.27E-04
23GO:0016618: hydroxypyruvate reductase activity2.27E-04
24GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity2.27E-04
25GO:0003984: acetolactate synthase activity2.27E-04
26GO:0008242: omega peptidase activity2.27E-04
27GO:0051996: squalene synthase activity2.27E-04
28GO:0010313: phytochrome binding2.27E-04
29GO:0008746: NAD(P)+ transhydrogenase activity2.27E-04
30GO:0003879: ATP phosphoribosyltransferase activity2.27E-04
31GO:0008168: methyltransferase activity2.67E-04
32GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity5.05E-04
33GO:0004047: aminomethyltransferase activity5.05E-04
34GO:0005353: fructose transmembrane transporter activity5.05E-04
35GO:0005464: UDP-xylose transmembrane transporter activity5.05E-04
36GO:0034722: gamma-glutamyl-peptidase activity5.05E-04
37GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity5.05E-04
38GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity5.05E-04
39GO:0004310: farnesyl-diphosphate farnesyltransferase activity5.05E-04
40GO:0003862: 3-isopropylmalate dehydrogenase activity5.05E-04
41GO:0010297: heteropolysaccharide binding5.05E-04
42GO:0019948: SUMO activating enzyme activity8.21E-04
43GO:0010277: chlorophyllide a oxygenase [overall] activity8.21E-04
44GO:0003935: GTP cyclohydrolase II activity8.21E-04
45GO:0030267: glyoxylate reductase (NADP) activity8.21E-04
46GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity8.21E-04
47GO:0071917: triose-phosphate transmembrane transporter activity8.21E-04
48GO:0048027: mRNA 5'-UTR binding1.17E-03
49GO:0022890: inorganic cation transmembrane transporter activity1.17E-03
50GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.17E-03
51GO:0080032: methyl jasmonate esterase activity1.56E-03
52GO:0008878: glucose-1-phosphate adenylyltransferase activity1.56E-03
53GO:0015098: molybdate ion transmembrane transporter activity1.56E-03
54GO:0043495: protein anchor1.56E-03
55GO:0015120: phosphoglycerate transmembrane transporter activity1.56E-03
56GO:0045300: acyl-[acyl-carrier-protein] desaturase activity1.99E-03
57GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1.99E-03
58GO:0080030: methyl indole-3-acetate esterase activity2.45E-03
59GO:0004332: fructose-bisphosphate aldolase activity2.45E-03
60GO:0035673: oligopeptide transmembrane transporter activity2.45E-03
61GO:0042578: phosphoric ester hydrolase activity2.45E-03
62GO:0016615: malate dehydrogenase activity2.45E-03
63GO:0052689: carboxylic ester hydrolase activity2.47E-03
64GO:0004602: glutathione peroxidase activity2.94E-03
65GO:0030060: L-malate dehydrogenase activity2.94E-03
66GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.14E-03
67GO:0004525: ribonuclease III activity4.02E-03
68GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water4.60E-03
69GO:0071949: FAD binding5.22E-03
70GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.85E-03
71GO:0016844: strictosidine synthase activity5.85E-03
72GO:0042802: identical protein binding6.00E-03
73GO:0030234: enzyme regulator activity6.51E-03
74GO:0015386: potassium:proton antiporter activity7.20E-03
75GO:0005506: iron ion binding7.79E-03
76GO:0015198: oligopeptide transporter activity7.92E-03
77GO:0004565: beta-galactosidase activity8.66E-03
78GO:0010329: auxin efflux transmembrane transporter activity8.66E-03
79GO:0005315: inorganic phosphate transmembrane transporter activity8.66E-03
80GO:0004089: carbonate dehydratase activity8.66E-03
81GO:0031072: heat shock protein binding8.66E-03
82GO:0016298: lipase activity9.98E-03
83GO:0051119: sugar transmembrane transporter activity1.02E-02
84GO:0005528: FK506 binding1.19E-02
85GO:0005345: purine nucleobase transmembrane transporter activity1.27E-02
86GO:0015079: potassium ion transmembrane transporter activity1.27E-02
87GO:0016491: oxidoreductase activity1.29E-02
88GO:0016779: nucleotidyltransferase activity1.45E-02
89GO:0022891: substrate-specific transmembrane transporter activity1.54E-02
90GO:0008810: cellulase activity1.54E-02
91GO:0016760: cellulose synthase (UDP-forming) activity1.54E-02
92GO:0005507: copper ion binding1.56E-02
93GO:0019825: oxygen binding1.56E-02
94GO:0003727: single-stranded RNA binding1.64E-02
95GO:0020037: heme binding1.76E-02
96GO:0008080: N-acetyltransferase activity1.93E-02
97GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.93E-02
98GO:0015299: solute:proton antiporter activity2.03E-02
99GO:0050662: coenzyme binding2.03E-02
100GO:0004872: receptor activity2.14E-02
101GO:0016762: xyloglucan:xyloglucosyl transferase activity2.24E-02
102GO:0015297: antiporter activity2.28E-02
103GO:0004518: nuclease activity2.35E-02
104GO:0016759: cellulose synthase activity2.57E-02
105GO:0008483: transaminase activity2.68E-02
106GO:0016722: oxidoreductase activity, oxidizing metal ions2.68E-02
107GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.68E-02
108GO:0016597: amino acid binding2.80E-02
109GO:0016168: chlorophyll binding3.03E-02
110GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.03E-02
111GO:0016798: hydrolase activity, acting on glycosyl bonds3.27E-02
112GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.40E-02
113GO:0000287: magnesium ion binding3.62E-02
114GO:0016788: hydrolase activity, acting on ester bonds3.75E-02
115GO:0003746: translation elongation factor activity4.17E-02
116GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.17E-02
117GO:0050661: NADP binding4.57E-02
118GO:0004364: glutathione transferase activity4.85E-02
119GO:0004185: serine-type carboxypeptidase activity4.98E-02
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Gene type



Gene DE type