GO Enrichment Analysis of Co-expressed Genes with
AT1G23180
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 2 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 3 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 4 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 5 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 7 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 8 | GO:0042793: transcription from plastid promoter | 1.06E-08 |
| 9 | GO:0009657: plastid organization | 1.40E-07 |
| 10 | GO:0009451: RNA modification | 2.17E-07 |
| 11 | GO:0009658: chloroplast organization | 1.09E-06 |
| 12 | GO:1901259: chloroplast rRNA processing | 3.22E-06 |
| 13 | GO:0009790: embryo development | 2.21E-05 |
| 14 | GO:0016556: mRNA modification | 3.26E-05 |
| 15 | GO:0010239: chloroplast mRNA processing | 3.26E-05 |
| 16 | GO:0009793: embryo development ending in seed dormancy | 1.25E-04 |
| 17 | GO:0006458: 'de novo' protein folding | 1.83E-04 |
| 18 | GO:0042026: protein refolding | 1.83E-04 |
| 19 | GO:0006824: cobalt ion transport | 2.99E-04 |
| 20 | GO:0010063: positive regulation of trichoblast fate specification | 2.99E-04 |
| 21 | GO:0042371: vitamin K biosynthetic process | 2.99E-04 |
| 22 | GO:0035987: endodermal cell differentiation | 2.99E-04 |
| 23 | GO:0006436: tryptophanyl-tRNA aminoacylation | 2.99E-04 |
| 24 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.99E-04 |
| 25 | GO:0006419: alanyl-tRNA aminoacylation | 2.99E-04 |
| 26 | GO:0042659: regulation of cell fate specification | 2.99E-04 |
| 27 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 2.99E-04 |
| 28 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 2.99E-04 |
| 29 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 2.99E-04 |
| 30 | GO:0006438: valyl-tRNA aminoacylation | 2.99E-04 |
| 31 | GO:0090558: plant epidermis development | 2.99E-04 |
| 32 | GO:0006353: DNA-templated transcription, termination | 3.02E-04 |
| 33 | GO:0010583: response to cyclopentenone | 4.22E-04 |
| 34 | GO:1900865: chloroplast RNA modification | 5.28E-04 |
| 35 | GO:0010027: thylakoid membrane organization | 6.23E-04 |
| 36 | GO:0034755: iron ion transmembrane transport | 6.55E-04 |
| 37 | GO:1900871: chloroplast mRNA modification | 6.55E-04 |
| 38 | GO:0018026: peptidyl-lysine monomethylation | 6.55E-04 |
| 39 | GO:0009662: etioplast organization | 6.55E-04 |
| 40 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 6.55E-04 |
| 41 | GO:1904143: positive regulation of carotenoid biosynthetic process | 6.55E-04 |
| 42 | GO:0001682: tRNA 5'-leader removal | 6.55E-04 |
| 43 | GO:0009875: pollen-pistil interaction | 6.55E-04 |
| 44 | GO:0006420: arginyl-tRNA aminoacylation | 6.55E-04 |
| 45 | GO:0060359: response to ammonium ion | 6.55E-04 |
| 46 | GO:0048255: mRNA stabilization | 6.55E-04 |
| 47 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.55E-04 |
| 48 | GO:0042780: tRNA 3'-end processing | 1.06E-03 |
| 49 | GO:0001578: microtubule bundle formation | 1.06E-03 |
| 50 | GO:0043157: response to cation stress | 1.06E-03 |
| 51 | GO:0005977: glycogen metabolic process | 1.06E-03 |
| 52 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 1.06E-03 |
| 53 | GO:0045910: negative regulation of DNA recombination | 1.06E-03 |
| 54 | GO:0090708: specification of plant organ axis polarity | 1.06E-03 |
| 55 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.52E-03 |
| 56 | GO:0051289: protein homotetramerization | 1.52E-03 |
| 57 | GO:1902476: chloride transmembrane transport | 1.52E-03 |
| 58 | GO:0010071: root meristem specification | 1.52E-03 |
| 59 | GO:0051513: regulation of monopolar cell growth | 1.52E-03 |
| 60 | GO:0006418: tRNA aminoacylation for protein translation | 1.56E-03 |
| 61 | GO:0061077: chaperone-mediated protein folding | 1.72E-03 |
| 62 | GO:0030104: water homeostasis | 2.04E-03 |
| 63 | GO:0044205: 'de novo' UMP biosynthetic process | 2.04E-03 |
| 64 | GO:0010021: amylopectin biosynthetic process | 2.04E-03 |
| 65 | GO:0042274: ribosomal small subunit biogenesis | 2.04E-03 |
| 66 | GO:0051322: anaphase | 2.04E-03 |
| 67 | GO:0006508: proteolysis | 2.58E-03 |
| 68 | GO:0010236: plastoquinone biosynthetic process | 2.61E-03 |
| 69 | GO:0008033: tRNA processing | 2.61E-03 |
| 70 | GO:0048497: maintenance of floral organ identity | 2.61E-03 |
| 71 | GO:0009107: lipoate biosynthetic process | 2.61E-03 |
| 72 | GO:0010158: abaxial cell fate specification | 2.61E-03 |
| 73 | GO:0048868: pollen tube development | 2.81E-03 |
| 74 | GO:0009913: epidermal cell differentiation | 3.22E-03 |
| 75 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.22E-03 |
| 76 | GO:0050665: hydrogen peroxide biosynthetic process | 3.22E-03 |
| 77 | GO:0009959: negative gravitropism | 3.22E-03 |
| 78 | GO:0019252: starch biosynthetic process | 3.24E-03 |
| 79 | GO:0009553: embryo sac development | 3.54E-03 |
| 80 | GO:0042372: phylloquinone biosynthetic process | 3.87E-03 |
| 81 | GO:0009082: branched-chain amino acid biosynthetic process | 3.87E-03 |
| 82 | GO:0017148: negative regulation of translation | 3.87E-03 |
| 83 | GO:0009942: longitudinal axis specification | 3.87E-03 |
| 84 | GO:0009099: valine biosynthetic process | 3.87E-03 |
| 85 | GO:0009854: oxidative photosynthetic carbon pathway | 3.87E-03 |
| 86 | GO:2000067: regulation of root morphogenesis | 3.87E-03 |
| 87 | GO:0019509: L-methionine salvage from methylthioadenosine | 3.87E-03 |
| 88 | GO:0005975: carbohydrate metabolic process | 3.95E-03 |
| 89 | GO:0009828: plant-type cell wall loosening | 4.20E-03 |
| 90 | GO:0006821: chloride transport | 4.57E-03 |
| 91 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 4.57E-03 |
| 92 | GO:0006400: tRNA modification | 4.57E-03 |
| 93 | GO:0007050: cell cycle arrest | 4.57E-03 |
| 94 | GO:0009772: photosynthetic electron transport in photosystem II | 4.57E-03 |
| 95 | GO:0010050: vegetative phase change | 4.57E-03 |
| 96 | GO:0048437: floral organ development | 4.57E-03 |
| 97 | GO:0009416: response to light stimulus | 4.73E-03 |
| 98 | GO:0001522: pseudouridine synthesis | 5.30E-03 |
| 99 | GO:0070413: trehalose metabolism in response to stress | 5.30E-03 |
| 100 | GO:0009850: auxin metabolic process | 5.30E-03 |
| 101 | GO:0055075: potassium ion homeostasis | 5.30E-03 |
| 102 | GO:0048564: photosystem I assembly | 5.30E-03 |
| 103 | GO:0009097: isoleucine biosynthetic process | 6.08E-03 |
| 104 | GO:0006526: arginine biosynthetic process | 6.08E-03 |
| 105 | GO:0010204: defense response signaling pathway, resistance gene-independent | 6.08E-03 |
| 106 | GO:0007389: pattern specification process | 6.08E-03 |
| 107 | GO:0048481: plant ovule development | 6.53E-03 |
| 108 | GO:0000373: Group II intron splicing | 6.89E-03 |
| 109 | GO:0000902: cell morphogenesis | 6.89E-03 |
| 110 | GO:0006098: pentose-phosphate shunt | 6.89E-03 |
| 111 | GO:2000280: regulation of root development | 7.74E-03 |
| 112 | GO:0031425: chloroplast RNA processing | 7.74E-03 |
| 113 | GO:0009098: leucine biosynthetic process | 7.74E-03 |
| 114 | GO:0006535: cysteine biosynthetic process from serine | 8.62E-03 |
| 115 | GO:0006298: mismatch repair | 8.62E-03 |
| 116 | GO:0006259: DNA metabolic process | 8.62E-03 |
| 117 | GO:0006265: DNA topological change | 9.55E-03 |
| 118 | GO:0009073: aromatic amino acid family biosynthetic process | 9.55E-03 |
| 119 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.05E-02 |
| 120 | GO:0045037: protein import into chloroplast stroma | 1.05E-02 |
| 121 | GO:0010582: floral meristem determinacy | 1.05E-02 |
| 122 | GO:0005983: starch catabolic process | 1.05E-02 |
| 123 | GO:0009691: cytokinin biosynthetic process | 1.15E-02 |
| 124 | GO:0006094: gluconeogenesis | 1.15E-02 |
| 125 | GO:0010207: photosystem II assembly | 1.25E-02 |
| 126 | GO:0010020: chloroplast fission | 1.25E-02 |
| 127 | GO:0009664: plant-type cell wall organization | 1.35E-02 |
| 128 | GO:0071732: cellular response to nitric oxide | 1.36E-02 |
| 129 | GO:0006364: rRNA processing | 1.45E-02 |
| 130 | GO:0006833: water transport | 1.47E-02 |
| 131 | GO:0005992: trehalose biosynthetic process | 1.58E-02 |
| 132 | GO:0019344: cysteine biosynthetic process | 1.58E-02 |
| 133 | GO:0009116: nucleoside metabolic process | 1.58E-02 |
| 134 | GO:0051302: regulation of cell division | 1.69E-02 |
| 135 | GO:0019953: sexual reproduction | 1.69E-02 |
| 136 | GO:0016998: cell wall macromolecule catabolic process | 1.81E-02 |
| 137 | GO:0015992: proton transport | 1.81E-02 |
| 138 | GO:0016226: iron-sulfur cluster assembly | 1.93E-02 |
| 139 | GO:0006730: one-carbon metabolic process | 1.93E-02 |
| 140 | GO:0007005: mitochondrion organization | 1.93E-02 |
| 141 | GO:0071369: cellular response to ethylene stimulus | 2.05E-02 |
| 142 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.05E-02 |
| 143 | GO:0010091: trichome branching | 2.18E-02 |
| 144 | GO:0042127: regulation of cell proliferation | 2.18E-02 |
| 145 | GO:0000226: microtubule cytoskeleton organization | 2.44E-02 |
| 146 | GO:0010305: leaf vascular tissue pattern formation | 2.57E-02 |
| 147 | GO:0006662: glycerol ether metabolic process | 2.57E-02 |
| 148 | GO:0009741: response to brassinosteroid | 2.57E-02 |
| 149 | GO:0048544: recognition of pollen | 2.71E-02 |
| 150 | GO:0006814: sodium ion transport | 2.71E-02 |
| 151 | GO:0007059: chromosome segregation | 2.71E-02 |
| 152 | GO:0009646: response to absence of light | 2.71E-02 |
| 153 | GO:0048825: cotyledon development | 2.85E-02 |
| 154 | GO:0008654: phospholipid biosynthetic process | 2.85E-02 |
| 155 | GO:0009851: auxin biosynthetic process | 2.85E-02 |
| 156 | GO:0010183: pollen tube guidance | 2.85E-02 |
| 157 | GO:0002229: defense response to oomycetes | 2.99E-02 |
| 158 | GO:0032502: developmental process | 3.13E-02 |
| 159 | GO:0009630: gravitropism | 3.13E-02 |
| 160 | GO:0071281: cellular response to iron ion | 3.28E-02 |
| 161 | GO:0010252: auxin homeostasis | 3.42E-02 |
| 162 | GO:0006464: cellular protein modification process | 3.42E-02 |
| 163 | GO:0000910: cytokinesis | 3.73E-02 |
| 164 | GO:0001666: response to hypoxia | 3.88E-02 |
| 165 | GO:0006974: cellular response to DNA damage stimulus | 4.20E-02 |
| 166 | GO:0009734: auxin-activated signaling pathway | 4.22E-02 |
| 167 | GO:0010411: xyloglucan metabolic process | 4.36E-02 |
| 168 | GO:0000160: phosphorelay signal transduction system | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 2 | GO:0051060: pullulanase activity | 0.00E+00 |
| 3 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 4 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 5 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 6 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 7 | GO:0070009: serine-type aminopeptidase activity | 0.00E+00 |
| 8 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 9 | GO:0004519: endonuclease activity | 1.00E-08 |
| 10 | GO:0004176: ATP-dependent peptidase activity | 6.08E-06 |
| 11 | GO:0003723: RNA binding | 1.11E-05 |
| 12 | GO:0001872: (1->3)-beta-D-glucan binding | 3.26E-05 |
| 13 | GO:0008237: metallopeptidase activity | 4.57E-05 |
| 14 | GO:0004556: alpha-amylase activity | 1.34E-04 |
| 15 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 2.99E-04 |
| 16 | GO:0052381: tRNA dimethylallyltransferase activity | 2.99E-04 |
| 17 | GO:0004160: dihydroxy-acid dehydratase activity | 2.99E-04 |
| 18 | GO:0004832: valine-tRNA ligase activity | 2.99E-04 |
| 19 | GO:0004830: tryptophan-tRNA ligase activity | 2.99E-04 |
| 20 | GO:0005227: calcium activated cation channel activity | 2.99E-04 |
| 21 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 2.99E-04 |
| 22 | GO:0004813: alanine-tRNA ligase activity | 2.99E-04 |
| 23 | GO:0019156: isoamylase activity | 6.55E-04 |
| 24 | GO:0017118: lipoyltransferase activity | 6.55E-04 |
| 25 | GO:0003852: 2-isopropylmalate synthase activity | 6.55E-04 |
| 26 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 6.55E-04 |
| 27 | GO:0004814: arginine-tRNA ligase activity | 6.55E-04 |
| 28 | GO:0016415: octanoyltransferase activity | 6.55E-04 |
| 29 | GO:0004047: aminomethyltransferase activity | 6.55E-04 |
| 30 | GO:0044183: protein binding involved in protein folding | 7.11E-04 |
| 31 | GO:0019843: rRNA binding | 8.92E-04 |
| 32 | GO:0004222: metalloendopeptidase activity | 9.82E-04 |
| 33 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 1.06E-03 |
| 34 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 1.52E-03 |
| 35 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.52E-03 |
| 36 | GO:0043023: ribosomal large subunit binding | 1.52E-03 |
| 37 | GO:0008508: bile acid:sodium symporter activity | 1.52E-03 |
| 38 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.52E-03 |
| 39 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.52E-03 |
| 40 | GO:0005253: anion channel activity | 2.04E-03 |
| 41 | GO:0008891: glycolate oxidase activity | 2.04E-03 |
| 42 | GO:0004659: prenyltransferase activity | 2.04E-03 |
| 43 | GO:0016279: protein-lysine N-methyltransferase activity | 2.04E-03 |
| 44 | GO:0016836: hydro-lyase activity | 2.04E-03 |
| 45 | GO:0004812: aminoacyl-tRNA ligase activity | 2.41E-03 |
| 46 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.61E-03 |
| 47 | GO:0005275: amine transmembrane transporter activity | 2.61E-03 |
| 48 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 2.61E-03 |
| 49 | GO:0005247: voltage-gated chloride channel activity | 3.22E-03 |
| 50 | GO:0030983: mismatched DNA binding | 3.22E-03 |
| 51 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.22E-03 |
| 52 | GO:0080030: methyl indole-3-acetate esterase activity | 3.22E-03 |
| 53 | GO:0004332: fructose-bisphosphate aldolase activity | 3.22E-03 |
| 54 | GO:0004526: ribonuclease P activity | 3.22E-03 |
| 55 | GO:0016887: ATPase activity | 3.73E-03 |
| 56 | GO:0004124: cysteine synthase activity | 3.87E-03 |
| 57 | GO:0008195: phosphatidate phosphatase activity | 3.87E-03 |
| 58 | GO:0004427: inorganic diphosphatase activity | 4.57E-03 |
| 59 | GO:0043022: ribosome binding | 5.30E-03 |
| 60 | GO:0030247: polysaccharide binding | 5.89E-03 |
| 61 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 6.08E-03 |
| 62 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 7.68E-03 |
| 63 | GO:0009672: auxin:proton symporter activity | 7.74E-03 |
| 64 | GO:0005381: iron ion transmembrane transporter activity | 7.74E-03 |
| 65 | GO:0004805: trehalose-phosphatase activity | 8.62E-03 |
| 66 | GO:0003993: acid phosphatase activity | 8.66E-03 |
| 67 | GO:0000049: tRNA binding | 1.05E-02 |
| 68 | GO:0010329: auxin efflux transmembrane transporter activity | 1.15E-02 |
| 69 | GO:0009982: pseudouridine synthase activity | 1.15E-02 |
| 70 | GO:0004565: beta-galactosidase activity | 1.15E-02 |
| 71 | GO:0043621: protein self-association | 1.16E-02 |
| 72 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.25E-02 |
| 73 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.47E-02 |
| 74 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.47E-02 |
| 75 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.47E-02 |
| 76 | GO:0003690: double-stranded DNA binding | 1.50E-02 |
| 77 | GO:0008408: 3'-5' exonuclease activity | 1.81E-02 |
| 78 | GO:0004650: polygalacturonase activity | 1.88E-02 |
| 79 | GO:0051082: unfolded protein binding | 2.06E-02 |
| 80 | GO:0008026: ATP-dependent helicase activity | 2.19E-02 |
| 81 | GO:0005524: ATP binding | 2.29E-02 |
| 82 | GO:0047134: protein-disulfide reductase activity | 2.31E-02 |
| 83 | GO:0004527: exonuclease activity | 2.57E-02 |
| 84 | GO:0010181: FMN binding | 2.71E-02 |
| 85 | GO:0004791: thioredoxin-disulfide reductase activity | 2.71E-02 |
| 86 | GO:0016853: isomerase activity | 2.71E-02 |
| 87 | GO:0016829: lyase activity | 2.80E-02 |
| 88 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.99E-02 |
| 89 | GO:0004518: nuclease activity | 3.13E-02 |
| 90 | GO:0000156: phosphorelay response regulator activity | 3.28E-02 |
| 91 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.28E-02 |
| 92 | GO:0016791: phosphatase activity | 3.42E-02 |
| 93 | GO:0003684: damaged DNA binding | 3.42E-02 |
| 94 | GO:0005525: GTP binding | 3.51E-02 |
| 95 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 3.58E-02 |
| 96 | GO:0016597: amino acid binding | 3.73E-02 |
| 97 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.36E-02 |