Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G22430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031116: positive regulation of microtubule polymerization0.00E+00
2GO:0043488: regulation of mRNA stability0.00E+00
3GO:0090071: negative regulation of ribosome biogenesis0.00E+00
4GO:0090042: tubulin deacetylation0.00E+00
5GO:0046460: neutral lipid biosynthetic process0.00E+00
6GO:0009734: auxin-activated signaling pathway2.32E-05
7GO:0040008: regulation of growth2.34E-05
8GO:0009658: chloroplast organization8.20E-05
9GO:0046620: regulation of organ growth2.73E-04
10GO:0006353: DNA-templated transcription, termination2.73E-04
11GO:0043266: regulation of potassium ion transport2.80E-04
12GO:0006659: phosphatidylserine biosynthetic process2.80E-04
13GO:0042547: cell wall modification involved in multidimensional cell growth2.80E-04
14GO:2000021: regulation of ion homeostasis2.80E-04
15GO:0034080: CENP-A containing nucleosome assembly2.80E-04
16GO:1902458: positive regulation of stomatal opening2.80E-04
17GO:0006177: GMP biosynthetic process2.80E-04
18GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process2.80E-04
19GO:0000476: maturation of 4.5S rRNA2.80E-04
20GO:0000967: rRNA 5'-end processing2.80E-04
21GO:0051418: microtubule nucleation by microtubule organizing center2.80E-04
22GO:0009733: response to auxin4.92E-04
23GO:1903426: regulation of reactive oxygen species biosynthetic process6.14E-04
24GO:0034470: ncRNA processing6.14E-04
25GO:0033566: gamma-tubulin complex localization6.14E-04
26GO:0034755: iron ion transmembrane transport6.14E-04
27GO:0006415: translational termination6.45E-04
28GO:0048467: gynoecium development9.39E-04
29GO:0010020: chloroplast fission9.39E-04
30GO:0001578: microtubule bundle formation9.96E-04
31GO:0045493: xylan catabolic process9.96E-04
32GO:0006760: folic acid-containing compound metabolic process9.96E-04
33GO:0007052: mitotic spindle organization9.96E-04
34GO:0006954: inflammatory response9.96E-04
35GO:0043572: plastid fission1.42E-03
36GO:0034508: centromere complex assembly1.42E-03
37GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.42E-03
38GO:0046653: tetrahydrofolate metabolic process1.42E-03
39GO:0010239: chloroplast mRNA processing1.42E-03
40GO:0090307: mitotic spindle assembly1.42E-03
41GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center1.42E-03
42GO:0009226: nucleotide-sugar biosynthetic process1.42E-03
43GO:0006730: one-carbon metabolic process1.70E-03
44GO:0046656: folic acid biosynthetic process1.91E-03
45GO:0006021: inositol biosynthetic process1.91E-03
46GO:0051322: anaphase1.91E-03
47GO:0022622: root system development1.91E-03
48GO:0007020: microtubule nucleation1.91E-03
49GO:0015846: polyamine transport1.91E-03
50GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.19E-03
51GO:0045038: protein import into chloroplast thylakoid membrane2.43E-03
52GO:0016123: xanthophyll biosynthetic process2.43E-03
53GO:0046785: microtubule polymerization2.43E-03
54GO:0009958: positive gravitropism2.54E-03
55GO:0010190: cytochrome b6f complex assembly3.00E-03
56GO:0009117: nucleotide metabolic process3.00E-03
57GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.00E-03
58GO:0016554: cytidine to uridine editing3.00E-03
59GO:0032973: amino acid export3.00E-03
60GO:0006655: phosphatidylglycerol biosynthetic process3.00E-03
61GO:0017148: negative regulation of translation3.62E-03
62GO:0046654: tetrahydrofolate biosynthetic process3.62E-03
63GO:0030488: tRNA methylation3.62E-03
64GO:0080086: stamen filament development3.62E-03
65GO:0009648: photoperiodism3.62E-03
66GO:0034389: lipid particle organization3.62E-03
67GO:1901259: chloroplast rRNA processing3.62E-03
68GO:0042372: phylloquinone biosynthetic process3.62E-03
69GO:0006400: tRNA modification4.26E-03
70GO:0032880: regulation of protein localization4.26E-03
71GO:0048528: post-embryonic root development4.26E-03
72GO:0043090: amino acid import4.26E-03
73GO:0010078: maintenance of root meristem identity4.95E-03
74GO:0009704: de-etiolation4.95E-03
75GO:2000070: regulation of response to water deprivation4.95E-03
76GO:0010492: maintenance of shoot apical meristem identity4.95E-03
77GO:0031540: regulation of anthocyanin biosynthetic process4.95E-03
78GO:0042255: ribosome assembly4.95E-03
79GO:0006875: cellular metal ion homeostasis4.95E-03
80GO:0009627: systemic acquired resistance5.06E-03
81GO:0032544: plastid translation5.67E-03
82GO:0043562: cellular response to nitrogen levels5.67E-03
83GO:0022900: electron transport chain5.67E-03
84GO:0080144: amino acid homeostasis6.43E-03
85GO:0000373: Group II intron splicing6.43E-03
86GO:0019432: triglyceride biosynthetic process6.43E-03
87GO:0048507: meristem development6.43E-03
88GO:0048527: lateral root development6.83E-03
89GO:1900865: chloroplast RNA modification7.22E-03
90GO:0042761: very long-chain fatty acid biosynthetic process7.22E-03
91GO:0006949: syncytium formation8.04E-03
92GO:1903507: negative regulation of nucleic acid-templated transcription8.90E-03
93GO:0006879: cellular iron ion homeostasis8.90E-03
94GO:0009684: indoleacetic acid biosynthetic process8.90E-03
95GO:0010015: root morphogenesis8.90E-03
96GO:0019684: photosynthesis, light reaction8.90E-03
97GO:0009089: lysine biosynthetic process via diaminopimelate8.90E-03
98GO:0009926: auxin polar transport9.67E-03
99GO:0008283: cell proliferation9.67E-03
100GO:0016024: CDP-diacylglycerol biosynthetic process9.79E-03
101GO:0045037: protein import into chloroplast stroma9.79E-03
102GO:0010229: inflorescence development1.07E-02
103GO:0009725: response to hormone1.07E-02
104GO:0010588: cotyledon vascular tissue pattern formation1.07E-02
105GO:2000012: regulation of auxin polar transport1.07E-02
106GO:0071732: cellular response to nitric oxide1.26E-02
107GO:0090351: seedling development1.26E-02
108GO:0010030: positive regulation of seed germination1.26E-02
109GO:0010025: wax biosynthetic process1.37E-02
110GO:0042023: DNA endoreduplication1.37E-02
111GO:0006071: glycerol metabolic process1.37E-02
112GO:0030150: protein import into mitochondrial matrix1.47E-02
113GO:0007275: multicellular organism development1.58E-02
114GO:0016575: histone deacetylation1.58E-02
115GO:0043622: cortical microtubule organization1.58E-02
116GO:2000022: regulation of jasmonic acid mediated signaling pathway1.80E-02
117GO:0031348: negative regulation of defense response1.80E-02
118GO:0009814: defense response, incompatible interaction1.80E-02
119GO:0071369: cellular response to ethylene stimulus1.91E-02
120GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.91E-02
121GO:0009306: protein secretion2.03E-02
122GO:0016117: carotenoid biosynthetic process2.15E-02
123GO:0008284: positive regulation of cell proliferation2.15E-02
124GO:0080022: primary root development2.27E-02
125GO:0008033: tRNA processing2.27E-02
126GO:0010087: phloem or xylem histogenesis2.27E-02
127GO:0042631: cellular response to water deprivation2.27E-02
128GO:0000226: microtubule cytoskeleton organization2.27E-02
129GO:0016042: lipid catabolic process2.35E-02
130GO:0048825: cotyledon development2.65E-02
131GO:0008654: phospholipid biosynthetic process2.65E-02
132GO:0009851: auxin biosynthetic process2.65E-02
133GO:0009791: post-embryonic development2.65E-02
134GO:0005975: carbohydrate metabolic process2.75E-02
135GO:0000302: response to reactive oxygen species2.78E-02
136GO:0016032: viral process2.91E-02
137GO:0032502: developmental process2.91E-02
138GO:1901657: glycosyl compound metabolic process3.05E-02
139GO:0071281: cellular response to iron ion3.05E-02
140GO:0009828: plant-type cell wall loosening3.19E-02
141GO:0010252: auxin homeostasis3.19E-02
142GO:0045490: pectin catabolic process3.22E-02
143GO:0007623: circadian rhythm3.22E-02
144GO:0000910: cytokinesis3.47E-02
145GO:0010027: thylakoid membrane organization3.62E-02
146GO:0009911: positive regulation of flower development3.62E-02
147GO:0007166: cell surface receptor signaling pathway3.68E-02
148GO:0008380: RNA splicing3.84E-02
149GO:0010411: xyloglucan metabolic process4.06E-02
RankGO TermAdjusted P value
1GO:0019808: polyamine binding0.00E+00
2GO:0043014: alpha-tubulin binding0.00E+00
3GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
4GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
5GO:0051721: protein phosphatase 2A binding0.00E+00
6GO:0042903: tubulin deacetylase activity0.00E+00
7GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
8GO:0008115: sarcosine oxidase activity0.00E+00
9GO:0004326: tetrahydrofolylpolyglutamate synthase activity3.59E-06
10GO:0015088: copper uptake transmembrane transporter activity2.80E-04
11GO:0050139: nicotinate-N-glucosyltransferase activity2.80E-04
12GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity2.80E-04
13GO:0009496: plastoquinol--plastocyanin reductase activity2.80E-04
14GO:0003747: translation release factor activity4.05E-04
15GO:0005381: iron ion transmembrane transporter activity4.79E-04
16GO:0004150: dihydroneopterin aldolase activity6.14E-04
17GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase6.14E-04
18GO:0010291: carotene beta-ring hydroxylase activity6.14E-04
19GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity6.14E-04
20GO:0009977: proton motive force dependent protein transmembrane transporter activity6.14E-04
21GO:0003938: IMP dehydrogenase activity6.14E-04
22GO:0102083: 7,8-dihydromonapterin aldolase activity6.14E-04
23GO:0015929: hexosaminidase activity6.14E-04
24GO:0004563: beta-N-acetylhexosaminidase activity6.14E-04
25GO:0004512: inositol-3-phosphate synthase activity6.14E-04
26GO:0080097: L-tryptophan:pyruvate aminotransferase activity6.14E-04
27GO:0052692: raffinose alpha-galactosidase activity9.96E-04
28GO:0070330: aromatase activity9.96E-04
29GO:0004557: alpha-galactosidase activity9.96E-04
30GO:0048487: beta-tubulin binding1.42E-03
31GO:0016149: translation release factor activity, codon specific1.42E-03
32GO:0043023: ribosomal large subunit binding1.42E-03
33GO:0035529: NADH pyrophosphatase activity1.42E-03
34GO:0043621: protein self-association1.56E-03
35GO:0030570: pectate lyase activity1.86E-03
36GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity1.91E-03
37GO:0046556: alpha-L-arabinofuranosidase activity1.91E-03
38GO:0004045: aminoacyl-tRNA hydrolase activity1.91E-03
39GO:0043015: gamma-tubulin binding1.91E-03
40GO:0009044: xylan 1,4-beta-xylosidase activity1.91E-03
41GO:0018685: alkane 1-monooxygenase activity2.43E-03
42GO:0016846: carbon-sulfur lyase activity2.43E-03
43GO:0004040: amidase activity2.43E-03
44GO:0016208: AMP binding3.00E-03
45GO:0016462: pyrophosphatase activity3.00E-03
46GO:0042578: phosphoric ester hydrolase activity3.00E-03
47GO:0003730: mRNA 3'-UTR binding3.62E-03
48GO:0004144: diacylglycerol O-acyltransferase activity3.62E-03
49GO:0004723: calcium-dependent protein serine/threonine phosphatase activity3.62E-03
50GO:0016832: aldehyde-lyase activity3.62E-03
51GO:0052689: carboxylic ester hydrolase activity3.91E-03
52GO:0016829: lyase activity4.76E-03
53GO:0043022: ribosome binding4.95E-03
54GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)5.67E-03
55GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.94E-03
56GO:0016614: oxidoreductase activity, acting on CH-OH group of donors6.83E-03
57GO:0031072: heat shock protein binding1.07E-02
58GO:0015266: protein channel activity1.07E-02
59GO:0016788: hydrolase activity, acting on ester bonds1.16E-02
60GO:0008083: growth factor activity1.17E-02
61GO:0051536: iron-sulfur cluster binding1.47E-02
62GO:0004407: histone deacetylase activity1.47E-02
63GO:0005528: FK506 binding1.47E-02
64GO:0003714: transcription corepressor activity1.47E-02
65GO:0016746: transferase activity, transferring acyl groups1.92E-02
66GO:0016740: transferase activity1.95E-02
67GO:0003727: single-stranded RNA binding2.03E-02
68GO:0019843: rRNA binding2.34E-02
69GO:0008536: Ran GTPase binding2.39E-02
70GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.40E-02
71GO:0019825: oxygen binding2.45E-02
72GO:0004872: receptor activity2.65E-02
73GO:0009055: electron carrier activity2.66E-02
74GO:0020037: heme binding2.94E-02
75GO:0008017: microtubule binding3.37E-02
76GO:0005506: iron ion binding4.01E-02
77GO:0004721: phosphoprotein phosphatase activity4.06E-02
78GO:0102483: scopolin beta-glucosidase activity4.06E-02
79GO:0042802: identical protein binding4.09E-02
80GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.37E-02
81GO:0003723: RNA binding4.45E-02
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Gene type



Gene DE type