Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G18000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071311: cellular response to acetate0.00E+00
2GO:0015843: methylammonium transport0.00E+00
3GO:0031222: arabinan catabolic process0.00E+00
4GO:0070979: protein K11-linked ubiquitination0.00E+00
5GO:0071260: cellular response to mechanical stimulus0.00E+00
6GO:1905421: regulation of plant organ morphogenesis0.00E+00
7GO:0043488: regulation of mRNA stability0.00E+00
8GO:0061157: mRNA destabilization0.00E+00
9GO:0030155: regulation of cell adhesion0.00E+00
10GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
11GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
12GO:0009606: tropism0.00E+00
13GO:0010068: protoderm histogenesis0.00E+00
14GO:1901698: response to nitrogen compound0.00E+00
15GO:0007638: mechanosensory behavior0.00E+00
16GO:0097164: ammonium ion metabolic process0.00E+00
17GO:0009734: auxin-activated signaling pathway7.84E-11
18GO:0046620: regulation of organ growth1.65E-10
19GO:0009733: response to auxin4.72E-09
20GO:0040008: regulation of growth2.05E-07
21GO:0009926: auxin polar transport2.43E-07
22GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.79E-05
23GO:0007389: pattern specification process8.64E-05
24GO:0009658: chloroplast organization9.24E-05
25GO:0000373: Group II intron splicing1.15E-04
26GO:0051513: regulation of monopolar cell growth1.41E-04
27GO:2000038: regulation of stomatal complex development2.39E-04
28GO:0032502: developmental process3.13E-04
29GO:0032876: negative regulation of DNA endoreduplication3.59E-04
30GO:0010252: auxin homeostasis3.85E-04
31GO:0006468: protein phosphorylation5.11E-04
32GO:0051418: microtubule nucleation by microtubule organizing center7.00E-04
33GO:0070509: calcium ion import7.00E-04
34GO:0010480: microsporocyte differentiation7.00E-04
35GO:0006436: tryptophanyl-tRNA aminoacylation7.00E-04
36GO:0034080: CENP-A containing nucleosome assembly7.00E-04
37GO:0000066: mitochondrial ornithine transport7.00E-04
38GO:0042255: ribosome assembly1.05E-03
39GO:2000123: positive regulation of stomatal complex development1.51E-03
40GO:0033566: gamma-tubulin complex localization1.51E-03
41GO:1900871: chloroplast mRNA modification1.51E-03
42GO:0070981: L-asparagine biosynthetic process1.51E-03
43GO:0071497: cellular response to freezing1.51E-03
44GO:0009786: regulation of asymmetric cell division1.51E-03
45GO:0006529: asparagine biosynthetic process1.51E-03
46GO:0071555: cell wall organization1.54E-03
47GO:0009638: phototropism1.81E-03
48GO:0009089: lysine biosynthetic process via diaminopimelate2.46E-03
49GO:0006816: calcium ion transport2.46E-03
50GO:0007052: mitotic spindle organization2.49E-03
51GO:0045910: negative regulation of DNA recombination2.49E-03
52GO:0048281: inflorescence morphogenesis2.49E-03
53GO:0051127: positive regulation of actin nucleation2.49E-03
54GO:0006954: inflammatory response2.49E-03
55GO:0071230: cellular response to amino acid stimulus2.49E-03
56GO:0031145: anaphase-promoting complex-dependent catabolic process2.49E-03
57GO:0051604: protein maturation2.49E-03
58GO:0071705: nitrogen compound transport2.49E-03
59GO:0016050: vesicle organization2.49E-03
60GO:0071398: cellular response to fatty acid2.49E-03
61GO:0009767: photosynthetic electron transport chain3.21E-03
62GO:2000012: regulation of auxin polar transport3.21E-03
63GO:1902476: chloride transmembrane transport3.63E-03
64GO:0007231: osmosensory signaling pathway3.63E-03
65GO:0030071: regulation of mitotic metaphase/anaphase transition3.63E-03
66GO:0051639: actin filament network formation3.63E-03
67GO:0044211: CTP salvage3.63E-03
68GO:0048645: animal organ formation3.63E-03
69GO:0019048: modulation by virus of host morphology or physiology3.63E-03
70GO:0090307: mitotic spindle assembly3.63E-03
71GO:0015696: ammonium transport3.63E-03
72GO:0046739: transport of virus in multicellular host3.63E-03
73GO:0032981: mitochondrial respiratory chain complex I assembly3.63E-03
74GO:2000904: regulation of starch metabolic process3.63E-03
75GO:0010020: chloroplast fission3.63E-03
76GO:0031048: chromatin silencing by small RNA3.63E-03
77GO:0010148: transpiration3.63E-03
78GO:0043572: plastid fission3.63E-03
79GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center3.63E-03
80GO:0034508: centromere complex assembly3.63E-03
81GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.63E-03
82GO:0009067: aspartate family amino acid biosynthetic process3.63E-03
83GO:0070588: calcium ion transmembrane transport4.07E-03
84GO:0000160: phosphorelay signal transduction system4.67E-03
85GO:0009742: brassinosteroid mediated signaling pathway4.87E-03
86GO:0051764: actin crosslink formation4.90E-03
87GO:0071249: cellular response to nitrate4.90E-03
88GO:0033500: carbohydrate homeostasis4.90E-03
89GO:0072488: ammonium transmembrane transport4.90E-03
90GO:0022622: root system development4.90E-03
91GO:0044205: 'de novo' UMP biosynthetic process4.90E-03
92GO:0051567: histone H3-K9 methylation4.90E-03
93GO:0044206: UMP salvage4.90E-03
94GO:0009165: nucleotide biosynthetic process4.90E-03
95GO:1901141: regulation of lignin biosynthetic process4.90E-03
96GO:0009944: polarity specification of adaxial/abaxial axis5.05E-03
97GO:0005992: trehalose biosynthetic process5.05E-03
98GO:1902183: regulation of shoot apical meristem development6.30E-03
99GO:0016123: xanthophyll biosynthetic process6.30E-03
100GO:0010438: cellular response to sulfur starvation6.30E-03
101GO:0010158: abaxial cell fate specification6.30E-03
102GO:0030308: negative regulation of cell growth6.30E-03
103GO:0010375: stomatal complex patterning6.30E-03
104GO:0009904: chloroplast accumulation movement6.30E-03
105GO:0006544: glycine metabolic process6.30E-03
106GO:0006839: mitochondrial transport7.03E-03
107GO:0010082: regulation of root meristem growth7.35E-03
108GO:0009959: negative gravitropism7.82E-03
109GO:0006655: phosphatidylglycerol biosynthetic process7.82E-03
110GO:0006139: nucleobase-containing compound metabolic process7.82E-03
111GO:0010315: auxin efflux7.82E-03
112GO:0006206: pyrimidine nucleobase metabolic process7.82E-03
113GO:0016458: gene silencing7.82E-03
114GO:0018258: protein O-linked glycosylation via hydroxyproline7.82E-03
115GO:0009228: thiamine biosynthetic process7.82E-03
116GO:0006563: L-serine metabolic process7.82E-03
117GO:0010405: arabinogalactan protein metabolic process7.82E-03
118GO:0016310: phosphorylation7.93E-03
119GO:0042631: cellular response to water deprivation9.39E-03
120GO:0080086: stamen filament development9.46E-03
121GO:2000037: regulation of stomatal complex patterning9.46E-03
122GO:0009942: longitudinal axis specification9.46E-03
123GO:0009903: chloroplast avoidance movement9.46E-03
124GO:0030488: tRNA methylation9.46E-03
125GO:2000033: regulation of seed dormancy process9.46E-03
126GO:0009088: threonine biosynthetic process9.46E-03
127GO:0007275: multicellular organism development9.75E-03
128GO:0009958: positive gravitropism1.01E-02
129GO:0010161: red light signaling pathway1.12E-02
130GO:0009610: response to symbiotic fungus1.12E-02
131GO:0048528: post-embryonic root development1.12E-02
132GO:0006821: chloride transport1.12E-02
133GO:0070370: cellular heat acclimation1.12E-02
134GO:0010050: vegetative phase change1.12E-02
135GO:0048437: floral organ development1.12E-02
136GO:0030307: positive regulation of cell growth1.12E-02
137GO:0010103: stomatal complex morphogenesis1.12E-02
138GO:0032880: regulation of protein localization1.12E-02
139GO:0009736: cytokinin-activated signaling pathway1.21E-02
140GO:0030154: cell differentiation1.26E-02
141GO:0007166: cell surface receptor signaling pathway1.26E-02
142GO:0010439: regulation of glucosinolate biosynthetic process1.31E-02
143GO:0001522: pseudouridine synthesis1.31E-02
144GO:0009850: auxin metabolic process1.31E-02
145GO:0009787: regulation of abscisic acid-activated signaling pathway1.31E-02
146GO:0009704: de-etiolation1.31E-02
147GO:0032875: regulation of DNA endoreduplication1.31E-02
148GO:0006353: DNA-templated transcription, termination1.31E-02
149GO:0048766: root hair initiation1.31E-02
150GO:0070413: trehalose metabolism in response to stress1.31E-02
151GO:0010583: response to cyclopentenone1.34E-02
152GO:0010099: regulation of photomorphogenesis1.51E-02
153GO:0006002: fructose 6-phosphate metabolic process1.51E-02
154GO:0001558: regulation of cell growth1.51E-02
155GO:0009827: plant-type cell wall modification1.51E-02
156GO:0010100: negative regulation of photomorphogenesis1.51E-02
157GO:0006526: arginine biosynthetic process1.51E-02
158GO:0010497: plasmodesmata-mediated intercellular transport1.51E-02
159GO:0009416: response to light stimulus1.61E-02
160GO:0009051: pentose-phosphate shunt, oxidative branch1.71E-02
161GO:2000024: regulation of leaf development1.71E-02
162GO:0006783: heme biosynthetic process1.71E-02
163GO:0000902: cell morphogenesis1.71E-02
164GO:0051607: defense response to virus1.72E-02
165GO:0009740: gibberellic acid mediated signaling pathway1.76E-02
166GO:0048364: root development1.77E-02
167GO:0042761: very long-chain fatty acid biosynthetic process1.93E-02
168GO:0035999: tetrahydrofolate interconversion1.93E-02
169GO:1900865: chloroplast RNA modification1.93E-02
170GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.93E-02
171GO:0031425: chloroplast RNA processing1.93E-02
172GO:0006259: DNA metabolic process2.15E-02
173GO:0009299: mRNA transcription2.15E-02
174GO:0010162: seed dormancy process2.15E-02
175GO:0006535: cysteine biosynthetic process from serine2.15E-02
176GO:0030422: production of siRNA involved in RNA interference2.15E-02
177GO:0048829: root cap development2.15E-02
178GO:0009641: shade avoidance2.15E-02
179GO:0006298: mismatch repair2.15E-02
180GO:0010015: root morphogenesis2.39E-02
181GO:0006265: DNA topological change2.39E-02
182GO:0009773: photosynthetic electron transport in photosystem I2.39E-02
183GO:0009682: induced systemic resistance2.39E-02
184GO:0006415: translational termination2.39E-02
185GO:0048229: gametophyte development2.39E-02
186GO:0008361: regulation of cell size2.63E-02
187GO:0015706: nitrate transport2.63E-02
188GO:0016024: CDP-diacylglycerol biosynthetic process2.63E-02
189GO:0045037: protein import into chloroplast stroma2.63E-02
190GO:0010582: floral meristem determinacy2.63E-02
191GO:0080167: response to karrikin2.74E-02
192GO:0009725: response to hormone2.88E-02
193GO:0010628: positive regulation of gene expression2.88E-02
194GO:0009785: blue light signaling pathway2.88E-02
195GO:0006006: glucose metabolic process2.88E-02
196GO:0030036: actin cytoskeleton organization2.88E-02
197GO:0010075: regulation of meristem growth2.88E-02
198GO:0009934: regulation of meristem structural organization3.14E-02
199GO:0010207: photosystem II assembly3.14E-02
200GO:0006541: glutamine metabolic process3.14E-02
201GO:0010167: response to nitrate3.41E-02
202GO:0090351: seedling development3.41E-02
203GO:0010030: positive regulation of seed germination3.41E-02
204GO:0006631: fatty acid metabolic process3.60E-02
205GO:0006071: glycerol metabolic process3.68E-02
206GO:0010025: wax biosynthetic process3.68E-02
207GO:0009833: plant-type primary cell wall biogenesis3.68E-02
208GO:0007623: circadian rhythm3.76E-02
209GO:0009451: RNA modification3.87E-02
210GO:0019344: cysteine biosynthetic process3.96E-02
211GO:0051017: actin filament bundle assembly3.96E-02
212GO:0030150: protein import into mitochondrial matrix3.96E-02
213GO:0007010: cytoskeleton organization3.96E-02
214GO:0010187: negative regulation of seed germination3.96E-02
215GO:0051302: regulation of cell division4.25E-02
216GO:0006418: tRNA aminoacylation for protein translation4.25E-02
217GO:0006874: cellular calcium ion homeostasis4.25E-02
218GO:0006825: copper ion transport4.25E-02
219GO:0009965: leaf morphogenesis4.38E-02
220GO:0006306: DNA methylation4.55E-02
221GO:0006855: drug transmembrane transport4.55E-02
222GO:0016998: cell wall macromolecule catabolic process4.55E-02
223GO:0008380: RNA splicing4.67E-02
224GO:0006730: one-carbon metabolic process4.85E-02
225GO:0031348: negative regulation of defense response4.85E-02
RankGO TermAdjusted P value
1GO:0019136: deoxynucleoside kinase activity0.00E+00
2GO:0015276: ligand-gated ion channel activity0.00E+00
3GO:0004056: argininosuccinate lyase activity0.00E+00
4GO:0009672: auxin:proton symporter activity1.49E-04
5GO:0019199: transmembrane receptor protein kinase activity2.39E-04
6GO:0005262: calcium channel activity3.37E-04
7GO:0010329: auxin efflux transmembrane transporter activity3.37E-04
8GO:0050139: nicotinate-N-glucosyltransferase activity7.00E-04
9GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity7.00E-04
10GO:0008066: glutamate receptor activity7.00E-04
11GO:0005290: L-histidine transmembrane transporter activity7.00E-04
12GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity7.00E-04
13GO:0004008: copper-exporting ATPase activity7.00E-04
14GO:0004071: aspartate-ammonia ligase activity7.00E-04
15GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity7.00E-04
16GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity7.00E-04
17GO:0004830: tryptophan-tRNA ligase activity7.00E-04
18GO:0010285: L,L-diaminopimelate aminotransferase activity7.00E-04
19GO:0010313: phytochrome binding7.00E-04
20GO:0003727: single-stranded RNA binding1.10E-03
21GO:0016301: kinase activity1.25E-03
22GO:0043425: bHLH transcription factor binding1.51E-03
23GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.51E-03
24GO:0000064: L-ornithine transmembrane transporter activity1.51E-03
25GO:0015929: hexosaminidase activity1.51E-03
26GO:0004563: beta-N-acetylhexosaminidase activity1.51E-03
27GO:0050017: L-3-cyanoalanine synthase activity1.51E-03
28GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.51E-03
29GO:0017118: lipoyltransferase activity1.51E-03
30GO:0004674: protein serine/threonine kinase activity1.58E-03
31GO:0016829: lyase activity1.72E-03
32GO:0043621: protein self-association1.84E-03
33GO:0004805: trehalose-phosphatase activity2.12E-03
34GO:0000156: phosphorelay response regulator activity2.29E-03
35GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.34E-03
36GO:0005089: Rho guanyl-nucleotide exchange factor activity2.46E-03
37GO:0070180: large ribosomal subunit rRNA binding2.49E-03
38GO:0070330: aromatase activity2.49E-03
39GO:0004557: alpha-galactosidase activity2.49E-03
40GO:0052692: raffinose alpha-galactosidase activity2.49E-03
41GO:0015189: L-lysine transmembrane transporter activity3.63E-03
42GO:0004072: aspartate kinase activity3.63E-03
43GO:0017172: cysteine dioxygenase activity3.63E-03
44GO:0015181: arginine transmembrane transporter activity3.63E-03
45GO:0035197: siRNA binding3.63E-03
46GO:0004672: protein kinase activity4.44E-03
47GO:0004845: uracil phosphoribosyltransferase activity4.90E-03
48GO:0004345: glucose-6-phosphate dehydrogenase activity4.90E-03
49GO:0080032: methyl jasmonate esterase activity4.90E-03
50GO:0043015: gamma-tubulin binding4.90E-03
51GO:0005253: anion channel activity4.90E-03
52GO:0042277: peptide binding4.90E-03
53GO:0046556: alpha-L-arabinofuranosidase activity4.90E-03
54GO:0031418: L-ascorbic acid binding5.05E-03
55GO:0008725: DNA-3-methyladenine glycosylase activity6.30E-03
56GO:0004372: glycine hydroxymethyltransferase activity6.30E-03
57GO:0018685: alkane 1-monooxygenase activity6.30E-03
58GO:0016773: phosphotransferase activity, alcohol group as acceptor6.30E-03
59GO:0030570: pectate lyase activity7.35E-03
60GO:0005524: ATP binding7.76E-03
61GO:0030983: mismatched DNA binding7.82E-03
62GO:0004605: phosphatidate cytidylyltransferase activity7.82E-03
63GO:1990714: hydroxyproline O-galactosyltransferase activity7.82E-03
64GO:0008519: ammonium transmembrane transporter activity7.82E-03
65GO:0005247: voltage-gated chloride channel activity7.82E-03
66GO:0004124: cysteine synthase activity9.46E-03
67GO:0008195: phosphatidate phosphatase activity9.46E-03
68GO:0004849: uridine kinase activity9.46E-03
69GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity9.46E-03
70GO:0003730: mRNA 3'-UTR binding9.46E-03
71GO:0004656: procollagen-proline 4-dioxygenase activity9.46E-03
72GO:0019899: enzyme binding1.12E-02
73GO:0003872: 6-phosphofructokinase activity1.12E-02
74GO:0005215: transporter activity1.31E-02
75GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.51E-02
76GO:0005375: copper ion transmembrane transporter activity1.51E-02
77GO:0016759: cellulose synthase activity1.53E-02
78GO:0004650: polygalacturonase activity1.69E-02
79GO:0008889: glycerophosphodiester phosphodiesterase activity1.71E-02
80GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.71E-02
81GO:0003747: translation release factor activity1.71E-02
82GO:0004519: endonuclease activity1.90E-02
83GO:0004713: protein tyrosine kinase activity2.15E-02
84GO:0008327: methyl-CpG binding2.39E-02
85GO:0015238: drug transmembrane transporter activity2.51E-02
86GO:0004521: endoribonuclease activity2.63E-02
87GO:0000976: transcription regulatory region sequence-specific DNA binding2.63E-02
88GO:0004252: serine-type endopeptidase activity2.87E-02
89GO:0030170: pyridoxal phosphate binding2.87E-02
90GO:0009982: pseudouridine synthase activity2.88E-02
91GO:0003725: double-stranded RNA binding2.88E-02
92GO:0004022: alcohol dehydrogenase (NAD) activity2.88E-02
93GO:0015266: protein channel activity2.88E-02
94GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.88E-02
95GO:0004089: carbonate dehydratase activity2.88E-02
96GO:0031072: heat shock protein binding2.88E-02
97GO:0008083: growth factor activity3.14E-02
98GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.14E-02
99GO:0004712: protein serine/threonine/tyrosine kinase activity3.31E-02
100GO:0004970: ionotropic glutamate receptor activity3.41E-02
101GO:0005217: intracellular ligand-gated ion channel activity3.41E-02
102GO:0042393: histone binding3.45E-02
103GO:0004871: signal transducer activity3.82E-02
104GO:0042803: protein homodimerization activity3.82E-02
105GO:0004185: serine-type carboxypeptidase activity3.90E-02
106GO:0004857: enzyme inhibitor activity3.96E-02
107GO:0005345: purine nucleobase transmembrane transporter activity4.25E-02
108GO:0035251: UDP-glucosyltransferase activity4.55E-02
109GO:0004176: ATP-dependent peptidase activity4.55E-02
110GO:0033612: receptor serine/threonine kinase binding4.55E-02
111GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.85E-02
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Gene type



Gene DE type