co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G16720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
2	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
3	GO:0009661: chromoplast organization	0.00E+00
4	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
5	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
6	GO:0009704: de-etiolation	1.70E-04
7	GO:0050821: protein stabilization	1.70E-04
8	GO:0051180: vitamin transport	2.04E-04
9	GO:1902025: nitrate import	2.04E-04
10	GO:0030974: thiamine pyrophosphate transport	2.04E-04
11	GO:0046467: membrane lipid biosynthetic process	2.04E-04
12	GO:0071277: cellular response to calcium ion	2.04E-04
13	GO:0043087: regulation of GTPase activity	2.04E-04
14	GO:0071461: cellular response to redox state	2.04E-04
15	GO:0046167: glycerol-3-phosphate biosynthetic process	2.04E-04
16	GO:0043007: maintenance of rDNA	2.04E-04
17	GO:0090548: response to nitrate starvation	2.04E-04
18	GO:0019510: S-adenosylhomocysteine catabolic process	2.04E-04
19	GO:0015969: guanosine tetraphosphate metabolic process	2.04E-04
20	GO:0009658: chloroplast organization	2.13E-04
21	GO:0015995: chlorophyll biosynthetic process	3.81E-04
22	GO:0080005: photosystem stoichiometry adjustment	4.57E-04
23	GO:0015893: drug transport	4.57E-04
24	GO:0006650: glycerophospholipid metabolic process	4.57E-04
25	GO:0033353: S-adenosylmethionine cycle	4.57E-04
26	GO:0010541: acropetal auxin transport	4.57E-04
27	GO:1904143: positive regulation of carotenoid biosynthetic process	4.57E-04
28	GO:0055114: oxidation-reduction process	5.59E-04
29	GO:0007031: peroxisome organization	6.82E-04
30	GO:0046168: glycerol-3-phosphate catabolic process	7.44E-04
31	GO:0010160: formation of animal organ boundary	7.44E-04
32	GO:0044375: regulation of peroxisome size	7.44E-04
33	GO:0006081: cellular aldehyde metabolic process	7.44E-04
34	GO:0046621: negative regulation of organ growth	7.44E-04
35	GO:0006636: unsaturated fatty acid biosynthetic process	7.58E-04
36	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.06E-03
37	GO:0006072: glycerol-3-phosphate metabolic process	1.06E-03
38	GO:0042823: pyridoxal phosphate biosynthetic process	1.06E-03
39	GO:2001141: regulation of RNA biosynthetic process	1.06E-03
40	GO:0006857: oligopeptide transport	1.27E-03
41	GO:0019722: calcium-mediated signaling	1.30E-03
42	GO:0010600: regulation of auxin biosynthetic process	1.41E-03
43	GO:0009902: chloroplast relocation	1.41E-03
44	GO:0010021: amylopectin biosynthetic process	1.41E-03
45	GO:0015689: molybdate ion transport	1.41E-03
46	GO:0016120: carotene biosynthetic process	1.80E-03
47	GO:0009107: lipoate biosynthetic process	1.80E-03
48	GO:0016123: xanthophyll biosynthetic process	1.80E-03
49	GO:0006465: signal peptide processing	1.80E-03
50	GO:0019252: starch biosynthetic process	1.88E-03
51	GO:0044550: secondary metabolite biosynthetic process	1.91E-03
52	GO:0019761: glucosinolate biosynthetic process	2.14E-03
53	GO:0032502: developmental process	2.14E-03
54	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.21E-03
55	GO:0060918: auxin transport	2.21E-03
56	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.21E-03
57	GO:0007267: cell-cell signaling	2.58E-03
58	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.66E-03
59	GO:0045926: negative regulation of growth	2.66E-03
60	GO:0017148: negative regulation of translation	2.66E-03
61	GO:0010189: vitamin E biosynthetic process	2.66E-03
62	GO:0009554: megasporogenesis	2.66E-03
63	GO:0010019: chloroplast-nucleus signaling pathway	2.66E-03
64	GO:0032259: methylation	2.85E-03
65	GO:0048437: floral organ development	3.13E-03
66	GO:0050829: defense response to Gram-negative bacterium	3.13E-03
67	GO:1900057: positive regulation of leaf senescence	3.13E-03
68	GO:0010161: red light signaling pathway	3.13E-03
69	GO:1900056: negative regulation of leaf senescence	3.13E-03
70	GO:0010411: xyloglucan metabolic process	3.40E-03
71	GO:0019827: stem cell population maintenance	3.63E-03
72	GO:0010928: regulation of auxin mediated signaling pathway	3.63E-03
73	GO:0042255: ribosome assembly	3.63E-03
74	GO:0006353: DNA-templated transcription, termination	3.63E-03
75	GO:0009690: cytokinin metabolic process	3.63E-03
76	GO:0009231: riboflavin biosynthetic process	3.63E-03
77	GO:0016559: peroxisome fission	3.63E-03
78	GO:0007155: cell adhesion	3.63E-03
79	GO:0009657: plastid organization	4.15E-03
80	GO:0010218: response to far red light	4.15E-03
81	GO:0009932: cell tip growth	4.15E-03
82	GO:0071482: cellular response to light stimulus	4.15E-03
83	GO:0006098: pentose-phosphate shunt	4.70E-03
84	GO:0009821: alkaloid biosynthetic process	4.70E-03
85	GO:0051865: protein autoubiquitination	4.70E-03
86	GO:0034765: regulation of ion transmembrane transport	4.70E-03
87	GO:0090333: regulation of stomatal closure	4.70E-03
88	GO:0006754: ATP biosynthetic process	4.70E-03
89	GO:0009637: response to blue light	4.76E-03
90	GO:0009098: leucine biosynthetic process	5.27E-03
91	GO:0010380: regulation of chlorophyll biosynthetic process	5.27E-03
92	GO:0010205: photoinhibition	5.27E-03
93	GO:0009688: abscisic acid biosynthetic process	5.86E-03
94	GO:0010114: response to red light	6.13E-03
95	GO:0042546: cell wall biogenesis	6.38E-03
96	GO:0009773: photosynthetic electron transport in photosystem I	6.48E-03
97	GO:0043085: positive regulation of catalytic activity	6.48E-03
98	GO:0006352: DNA-templated transcription, initiation	6.48E-03
99	GO:0016485: protein processing	6.48E-03
100	GO:0008361: regulation of cell size	7.12E-03
101	GO:0009725: response to hormone	7.78E-03
102	GO:0006094: gluconeogenesis	7.78E-03
103	GO:0009767: photosynthetic electron transport chain	7.78E-03
104	GO:0009585: red, far-red light phototransduction	8.27E-03
105	GO:0010540: basipetal auxin transport	8.47E-03
106	GO:0042343: indole glucosinolate metabolic process	9.17E-03
107	GO:0043086: negative regulation of catalytic activity	9.79E-03
108	GO:0006096: glycolytic process	9.79E-03
109	GO:0010025: wax biosynthetic process	9.90E-03
110	GO:0009833: plant-type primary cell wall biogenesis	9.90E-03
111	GO:0019762: glucosinolate catabolic process	9.90E-03
112	GO:0051017: actin filament bundle assembly	1.06E-02
113	GO:0009768: photosynthesis, light harvesting in photosystem I	1.14E-02
114	GO:0031408: oxylipin biosynthetic process	1.22E-02
115	GO:0098542: defense response to other organism	1.22E-02
116	GO:0006396: RNA processing	1.22E-02
117	GO:0006730: one-carbon metabolic process	1.30E-02
118	GO:0030433: ubiquitin-dependent ERAD pathway	1.30E-02
119	GO:0007005: mitochondrion organization	1.30E-02
120	GO:0030245: cellulose catabolic process	1.30E-02
121	GO:0010017: red or far-red light signaling pathway	1.30E-02
122	GO:0048443: stamen development	1.47E-02
123	GO:0006817: phosphate ion transport	1.47E-02
124	GO:0009306: protein secretion	1.47E-02
125	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.55E-02
126	GO:0042391: regulation of membrane potential	1.64E-02
127	GO:0009958: positive gravitropism	1.73E-02
128	GO:0010197: polar nucleus fusion	1.73E-02
129	GO:0010182: sugar mediated signaling pathway	1.73E-02
130	GO:0048868: pollen tube development	1.73E-02
131	GO:0009741: response to brassinosteroid	1.73E-02
132	GO:0007059: chromosome segregation	1.82E-02
133	GO:0008654: phospholipid biosynthetic process	1.92E-02
134	GO:0071555: cell wall organization	2.10E-02
135	GO:0010583: response to cyclopentenone	2.11E-02
136	GO:0007264: small GTPase mediated signal transduction	2.11E-02
137	GO:0030163: protein catabolic process	2.21E-02
138	GO:0009639: response to red or far red light	2.30E-02
139	GO:0071805: potassium ion transmembrane transport	2.41E-02
140	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.72E-02
141	GO:0030244: cellulose biosynthetic process	3.16E-02
142	GO:0018298: protein-chromophore linkage	3.16E-02
143	GO:0000160: phosphorelay signal transduction system	3.27E-02
144	GO:0006499: N-terminal protein myristoylation	3.38E-02
145	GO:0006970: response to osmotic stress	3.41E-02
146	GO:0048527: lateral root development	3.50E-02
147	GO:0009910: negative regulation of flower development	3.50E-02
148	GO:0006810: transport	3.69E-02
149	GO:0006468: protein phosphorylation	3.72E-02
150	GO:0034599: cellular response to oxidative stress	3.86E-02
151	GO:0005975: carbohydrate metabolic process	3.87E-02
152	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.05E-02
153	GO:0006839: mitochondrial transport	4.10E-02
154	GO:0009640: photomorphogenesis	4.47E-02
155	GO:0009926: auxin polar transport	4.47E-02
156	GO:0009744: response to sucrose	4.47E-02
157	GO:0015979: photosynthesis	4.47E-02
158	GO:0000209: protein polyubiquitination	4.60E-02
159	GO:0045454: cell redox homeostasis	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
2	GO:0080067: 4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
3	GO:0080070: 8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
4	GO:0080066: 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
5	GO:0033840: NDP-glucose-starch glucosyltransferase activity	0.00E+00
6	GO:0045550: geranylgeranyl reductase activity	0.00E+00
7	GO:0080068: 5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
8	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
9	GO:0080071: indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
10	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
11	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
12	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
13	GO:0080069: 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
14	GO:0030794: (S)-coclaurine-N-methyltransferase activity	0.00E+00
15	GO:0018708: thiol S-methyltransferase activity	1.97E-06
16	GO:0004373: glycogen (starch) synthase activity	7.24E-06
17	GO:0004565: beta-galactosidase activity	2.28E-05
18	GO:0009011: starch synthase activity	3.05E-05
19	GO:0010313: phytochrome binding	2.04E-04
20	GO:0035671: enone reductase activity	2.04E-04
21	GO:0046906: tetrapyrrole binding	2.04E-04
22	GO:0090422: thiamine pyrophosphate transporter activity	2.04E-04
23	GO:0004013: adenosylhomocysteinase activity	2.04E-04
24	GO:0004802: transketolase activity	4.57E-04
25	GO:0008728: GTP diphosphokinase activity	4.57E-04
26	GO:0047364: desulfoglucosinolate sulfotransferase activity	4.57E-04
27	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	4.57E-04
28	GO:0033201: alpha-1,4-glucan synthase activity	4.57E-04
29	GO:0016992: lipoate synthase activity	7.44E-04
30	GO:0003861: 3-isopropylmalate dehydratase activity	7.44E-04
31	GO:0003935: GTP cyclohydrolase II activity	7.44E-04
32	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	7.44E-04
33	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	7.44E-04
34	GO:0008430: selenium binding	7.44E-04
35	GO:0010277: chlorophyllide a oxygenase [overall] activity	7.44E-04
36	GO:0042802: identical protein binding	9.04E-04
37	GO:0048027: mRNA 5'-UTR binding	1.06E-03
38	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.06E-03
39	GO:0004672: protein kinase activity	1.08E-03
40	GO:0008168: methyltransferase activity	1.15E-03
41	GO:0003727: single-stranded RNA binding	1.30E-03
42	GO:0016987: sigma factor activity	1.41E-03
43	GO:0015098: molybdate ion transmembrane transporter activity	1.41E-03
44	GO:0042277: peptide binding	1.41E-03
45	GO:0001053: plastid sigma factor activity	1.41E-03
46	GO:0016836: hydro-lyase activity	1.41E-03
47	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.41E-03
48	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.80E-03
49	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.01E-03
50	GO:0035673: oligopeptide transmembrane transporter activity	2.21E-03
51	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.21E-03
52	GO:0004332: fructose-bisphosphate aldolase activity	2.21E-03
53	GO:0005242: inward rectifier potassium channel activity	2.66E-03
54	GO:0019899: enzyme binding	3.13E-03
55	GO:0046910: pectinesterase inhibitor activity	3.33E-03
56	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.40E-03
57	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.15E-03
58	GO:0071949: FAD binding	4.70E-03
59	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	4.70E-03
60	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.94E-03
61	GO:0016844: strictosidine synthase activity	5.27E-03
62	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.27E-03
63	GO:0015198: oligopeptide transporter activity	7.12E-03
64	GO:0051287: NAD binding	7.43E-03
65	GO:0010329: auxin efflux transmembrane transporter activity	7.78E-03
66	GO:0005315: inorganic phosphate transmembrane transporter activity	7.78E-03
67	GO:0031072: heat shock protein binding	7.78E-03
68	GO:0031624: ubiquitin conjugating enzyme binding	8.47E-03
69	GO:0003690: double-stranded DNA binding	8.56E-03
70	GO:0008146: sulfotransferase activity	9.17E-03
71	GO:0031409: pigment binding	9.90E-03
72	GO:0016491: oxidoreductase activity	9.90E-03
73	GO:0004871: signal transducer activity	1.11E-02
74	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.16E-02
75	GO:0008810: cellulase activity	1.38E-02
76	GO:0016760: cellulose synthase (UDP-forming) activity	1.38E-02
77	GO:0030551: cyclic nucleotide binding	1.64E-02
78	GO:0005249: voltage-gated potassium channel activity	1.64E-02
79	GO:0008080: N-acetyltransferase activity	1.73E-02
80	GO:0004872: receptor activity	1.92E-02
81	GO:0048038: quinone binding	2.01E-02
82	GO:0005506: iron ion binding	2.05E-02
83	GO:0004518: nuclease activity	2.11E-02
84	GO:0000156: phosphorelay response regulator activity	2.21E-02
85	GO:0016759: cellulose synthase activity	2.30E-02
86	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.41E-02
87	GO:0005215: transporter activity	2.44E-02
88	GO:0016168: chlorophyll binding	2.72E-02
89	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.05E-02
90	GO:0005096: GTPase activator activity	3.27E-02
91	GO:0008233: peptidase activity	3.85E-02
92	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.98E-02
93	GO:0061630: ubiquitin protein ligase activity	4.12E-02
94	GO:0052689: carboxylic ester hydrolase activity	4.33E-02
95	GO:0005507: copper ion binding	4.37E-02
96	GO:0019825: oxygen binding	4.37E-02
97	GO:0043621: protein self-association	4.73E-02
98	GO:0035091: phosphatidylinositol binding	4.73E-02
99	GO:0051537: 2 iron, 2 sulfur cluster binding	4.73E-02
100	GO:0015293: symporter activity	4.86E-02
101	GO:0016757: transferase activity, transferring glycosyl groups	4.88E-02
102	GO:0042803: protein homodimerization activity	4.90E-02