Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G16350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
2GO:0031116: positive regulation of microtubule polymerization0.00E+00
3GO:0007037: vacuolar phosphate transport0.00E+00
4GO:0010068: protoderm histogenesis0.00E+00
5GO:0031129: inductive cell-cell signaling0.00E+00
6GO:2001294: malonyl-CoA catabolic process0.00E+00
7GO:0006399: tRNA metabolic process0.00E+00
8GO:0010412: mannan metabolic process0.00E+00
9GO:0071311: cellular response to acetate0.00E+00
10GO:0015843: methylammonium transport0.00E+00
11GO:0071260: cellular response to mechanical stimulus0.00E+00
12GO:0043488: regulation of mRNA stability0.00E+00
13GO:0045176: apical protein localization0.00E+00
14GO:0090706: specification of plant organ position0.00E+00
15GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
16GO:0009902: chloroplast relocation7.90E-05
17GO:0051322: anaphase7.90E-05
18GO:0010158: abaxial cell fate specification1.23E-04
19GO:0009658: chloroplast organization1.94E-04
20GO:0009082: branched-chain amino acid biosynthetic process2.41E-04
21GO:0009099: valine biosynthetic process2.41E-04
22GO:1902265: abscisic acid homeostasis3.57E-04
23GO:0071028: nuclear mRNA surveillance3.57E-04
24GO:0043266: regulation of potassium ion transport3.57E-04
25GO:0006659: phosphatidylserine biosynthetic process3.57E-04
26GO:2000021: regulation of ion homeostasis3.57E-04
27GO:0006264: mitochondrial DNA replication3.57E-04
28GO:0033259: plastid DNA replication3.57E-04
29GO:1902458: positive regulation of stomatal opening3.57E-04
30GO:0010450: inflorescence meristem growth3.57E-04
31GO:0010482: regulation of epidermal cell division3.57E-04
32GO:0007155: cell adhesion3.92E-04
33GO:0009097: isoleucine biosynthetic process4.81E-04
34GO:1900865: chloroplast RNA modification6.80E-04
35GO:1900871: chloroplast mRNA modification7.77E-04
36GO:2000039: regulation of trichome morphogenesis7.77E-04
37GO:0007154: cell communication7.77E-04
38GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation7.77E-04
39GO:0042814: monopolar cell growth7.77E-04
40GO:0031125: rRNA 3'-end processing7.77E-04
41GO:1903426: regulation of reactive oxygen species biosynthetic process7.77E-04
42GO:0071051: polyadenylation-dependent snoRNA 3'-end processing7.77E-04
43GO:0034475: U4 snRNA 3'-end processing7.77E-04
44GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole7.77E-04
45GO:0080005: photosystem stoichiometry adjustment7.77E-04
46GO:0071230: cellular response to amino acid stimulus1.26E-03
47GO:0045604: regulation of epidermal cell differentiation1.26E-03
48GO:0006753: nucleoside phosphate metabolic process1.26E-03
49GO:0001578: microtubule bundle formation1.26E-03
50GO:0045493: xylan catabolic process1.26E-03
51GO:0006760: folic acid-containing compound metabolic process1.26E-03
52GO:0045165: cell fate commitment1.26E-03
53GO:0016075: rRNA catabolic process1.26E-03
54GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'1.26E-03
55GO:0031022: nuclear migration along microfilament1.26E-03
56GO:0051127: positive regulation of actin nucleation1.26E-03
57GO:0019419: sulfate reduction1.26E-03
58GO:0010020: chloroplast fission1.33E-03
59GO:0015696: ammonium transport1.81E-03
60GO:0048530: fruit morphogenesis1.81E-03
61GO:0006164: purine nucleotide biosynthetic process1.81E-03
62GO:0006168: adenine salvage1.81E-03
63GO:0043572: plastid fission1.81E-03
64GO:2001141: regulation of RNA biosynthetic process1.81E-03
65GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.81E-03
66GO:0006166: purine ribonucleoside salvage1.81E-03
67GO:0051639: actin filament network formation1.81E-03
68GO:0009226: nucleotide-sugar biosynthetic process1.81E-03
69GO:0048645: animal organ formation1.81E-03
70GO:0005992: trehalose biosynthetic process1.83E-03
71GO:0019344: cysteine biosynthetic process1.83E-03
72GO:0046656: folic acid biosynthetic process2.44E-03
73GO:0006021: inositol biosynthetic process2.44E-03
74GO:0007020: microtubule nucleation2.44E-03
75GO:0009165: nucleotide biosynthetic process2.44E-03
76GO:0051764: actin crosslink formation2.44E-03
77GO:0015846: polyamine transport2.44E-03
78GO:0046355: mannan catabolic process2.44E-03
79GO:0072488: ammonium transmembrane transport2.44E-03
80GO:0046785: microtubule polymerization3.11E-03
81GO:0006544: glycine metabolic process3.11E-03
82GO:0045038: protein import into chloroplast thylakoid membrane3.11E-03
83GO:1902183: regulation of shoot apical meristem development3.11E-03
84GO:0016123: xanthophyll biosynthetic process3.11E-03
85GO:0044209: AMP salvage3.11E-03
86GO:0016554: cytidine to uridine editing3.85E-03
87GO:0009117: nucleotide metabolic process3.85E-03
88GO:0009635: response to herbicide3.85E-03
89GO:0000741: karyogamy3.85E-03
90GO:0006563: L-serine metabolic process3.85E-03
91GO:0048827: phyllome development3.85E-03
92GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.85E-03
93GO:0009959: negative gravitropism3.85E-03
94GO:0006655: phosphatidylglycerol biosynthetic process3.85E-03
95GO:0006139: nucleobase-containing compound metabolic process3.85E-03
96GO:0048825: cotyledon development4.20E-03
97GO:0046654: tetrahydrofolate biosynthetic process4.64E-03
98GO:0009903: chloroplast avoidance movement4.64E-03
99GO:0048444: floral organ morphogenesis4.64E-03
100GO:0080086: stamen filament development4.64E-03
101GO:0042372: phylloquinone biosynthetic process4.64E-03
102GO:0010583: response to cyclopentenone4.81E-03
103GO:0009734: auxin-activated signaling pathway5.02E-03
104GO:0010050: vegetative phase change5.48E-03
105GO:0015937: coenzyme A biosynthetic process5.48E-03
106GO:0006400: tRNA modification5.48E-03
107GO:0010161: red light signaling pathway5.48E-03
108GO:0048528: post-embryonic root development5.48E-03
109GO:0000910: cytokinesis6.15E-03
110GO:0009787: regulation of abscisic acid-activated signaling pathway6.37E-03
111GO:0009850: auxin metabolic process6.37E-03
112GO:0010078: maintenance of root meristem identity6.37E-03
113GO:0042255: ribosome assembly6.37E-03
114GO:0046620: regulation of organ growth6.37E-03
115GO:0009704: de-etiolation6.37E-03
116GO:0006353: DNA-templated transcription, termination6.37E-03
117GO:0070413: trehalose metabolism in response to stress6.37E-03
118GO:2000070: regulation of response to water deprivation6.37E-03
119GO:0010492: maintenance of shoot apical meristem identity6.37E-03
120GO:0010029: regulation of seed germination6.89E-03
121GO:0009627: systemic acquired resistance7.28E-03
122GO:0010100: negative regulation of photomorphogenesis7.30E-03
123GO:0006997: nucleus organization7.30E-03
124GO:0043562: cellular response to nitrogen levels7.30E-03
125GO:0010093: specification of floral organ identity7.30E-03
126GO:0010099: regulation of photomorphogenesis7.30E-03
127GO:0006002: fructose 6-phosphate metabolic process7.30E-03
128GO:0071482: cellular response to light stimulus7.30E-03
129GO:2000024: regulation of leaf development8.29E-03
130GO:0048507: meristem development8.29E-03
131GO:0006783: heme biosynthetic process8.29E-03
132GO:0000373: Group II intron splicing8.29E-03
133GO:0006189: 'de novo' IMP biosynthetic process8.29E-03
134GO:0010206: photosystem II repair8.29E-03
135GO:0010018: far-red light signaling pathway9.31E-03
136GO:0048354: mucilage biosynthetic process involved in seed coat development9.31E-03
137GO:0009638: phototropism9.31E-03
138GO:0042761: very long-chain fatty acid biosynthetic process9.31E-03
139GO:0009098: leucine biosynthetic process9.31E-03
140GO:0040008: regulation of growth9.74E-03
141GO:0006535: cysteine biosynthetic process from serine1.04E-02
142GO:0000103: sulfate assimilation1.04E-02
143GO:0006949: syncytium formation1.04E-02
144GO:0010192: mucilage biosynthetic process1.04E-02
145GO:0009299: mRNA transcription1.04E-02
146GO:0009637: response to blue light1.08E-02
147GO:0009733: response to auxin1.09E-02
148GO:1903507: negative regulation of nucleic acid-templated transcription1.15E-02
149GO:0006352: DNA-templated transcription, initiation1.15E-02
150GO:0006415: translational termination1.15E-02
151GO:0009684: indoleacetic acid biosynthetic process1.15E-02
152GO:0006816: calcium ion transport1.15E-02
153GO:0006839: mitochondrial transport1.23E-02
154GO:0016024: CDP-diacylglycerol biosynthetic process1.27E-02
155GO:0045037: protein import into chloroplast stroma1.27E-02
156GO:0010582: floral meristem determinacy1.27E-02
157GO:0006631: fatty acid metabolic process1.29E-02
158GO:0010588: cotyledon vascular tissue pattern formation1.39E-02
159GO:0010229: inflorescence development1.39E-02
160GO:0030036: actin cytoskeleton organization1.39E-02
161GO:0050826: response to freezing1.39E-02
162GO:0009725: response to hormone1.39E-02
163GO:0030048: actin filament-based movement1.39E-02
164GO:0009933: meristem structural organization1.51E-02
165GO:0010540: basipetal auxin transport1.51E-02
166GO:0048467: gynoecium development1.51E-02
167GO:0009825: multidimensional cell growth1.64E-02
168GO:0090351: seedling development1.64E-02
169GO:0010030: positive regulation of seed germination1.64E-02
170GO:0009826: unidimensional cell growth1.72E-02
171GO:0009664: plant-type cell wall organization1.76E-02
172GO:0010025: wax biosynthetic process1.77E-02
173GO:0042753: positive regulation of circadian rhythm1.77E-02
174GO:0006636: unsaturated fatty acid biosynthetic process1.77E-02
175GO:0009585: red, far-red light phototransduction1.89E-02
176GO:0007010: cytoskeleton organization1.90E-02
177GO:0051017: actin filament bundle assembly1.90E-02
178GO:0010187: negative regulation of seed germination1.90E-02
179GO:0009944: polarity specification of adaxial/abaxial axis1.90E-02
180GO:0006874: cellular calcium ion homeostasis2.04E-02
181GO:0043622: cortical microtubule organization2.04E-02
182GO:0048367: shoot system development2.31E-02
183GO:2000022: regulation of jasmonic acid mediated signaling pathway2.33E-02
184GO:0035428: hexose transmembrane transport2.33E-02
185GO:0080092: regulation of pollen tube growth2.33E-02
186GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.46E-02
187GO:0009686: gibberellin biosynthetic process2.48E-02
188GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.48E-02
189GO:0009740: gibberellic acid mediated signaling pathway2.53E-02
190GO:0046777: protein autophosphorylation2.57E-02
191GO:0019722: calcium-mediated signaling2.63E-02
192GO:0009306: protein secretion2.63E-02
193GO:0010091: trichome branching2.63E-02
194GO:0009624: response to nematode2.69E-02
195GO:0016117: carotenoid biosynthetic process2.79E-02
196GO:0070417: cellular response to cold2.79E-02
197GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.79E-02
198GO:0000226: microtubule cytoskeleton organization2.95E-02
199GO:0042335: cuticle development2.95E-02
200GO:0080022: primary root development2.95E-02
201GO:0008033: tRNA processing2.95E-02
202GO:0034220: ion transmembrane transport2.95E-02
203GO:0010087: phloem or xylem histogenesis2.95E-02
204GO:0042631: cellular response to water deprivation2.95E-02
205GO:0010154: fruit development3.11E-02
206GO:0010197: polar nucleus fusion3.11E-02
207GO:0010182: sugar mediated signaling pathway3.11E-02
208GO:0046323: glucose import3.11E-02
209GO:0008360: regulation of cell shape3.11E-02
210GO:0009958: positive gravitropism3.11E-02
211GO:0009791: post-embryonic development3.44E-02
212GO:0008654: phospholipid biosynthetic process3.44E-02
213GO:0009851: auxin biosynthetic process3.44E-02
214GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.61E-02
215GO:0016032: viral process3.78E-02
216GO:0032502: developmental process3.78E-02
217GO:0030163: protein catabolic process3.96E-02
218GO:0006464: cellular protein modification process4.14E-02
219GO:0009828: plant-type cell wall loosening4.14E-02
220GO:0009639: response to red or far red light4.14E-02
221GO:0006413: translational initiation4.32E-02
222GO:0071805: potassium ion transmembrane transport4.32E-02
223GO:0045490: pectin catabolic process4.63E-02
224GO:0007623: circadian rhythm4.63E-02
225GO:0009911: positive regulation of flower development4.69E-02
226GO:0016126: sterol biosynthetic process4.69E-02
RankGO TermAdjusted P value
1GO:0019808: polyamine binding0.00E+00
2GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
3GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
4GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
5GO:0015276: ligand-gated ion channel activity0.00E+00
6GO:1990534: thermospermine oxidase activity0.00E+00
7GO:0019136: deoxynucleoside kinase activity0.00E+00
8GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
9GO:0008066: glutamate receptor activity3.57E-04
10GO:0003984: acetolactate synthase activity3.57E-04
11GO:0010313: phytochrome binding3.57E-04
12GO:0050139: nicotinate-N-glucosyltransferase activity3.57E-04
13GO:0010945: CoA pyrophosphatase activity3.57E-04
14GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.57E-04
15GO:0004150: dihydroneopterin aldolase activity7.77E-04
16GO:0015929: hexosaminidase activity7.77E-04
17GO:0004563: beta-N-acetylhexosaminidase activity7.77E-04
18GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding7.77E-04
19GO:0004512: inositol-3-phosphate synthase activity7.77E-04
20GO:0050017: L-3-cyanoalanine synthase activity7.77E-04
21GO:0010291: carotene beta-ring hydroxylase activity7.77E-04
22GO:0017118: lipoyltransferase activity7.77E-04
23GO:0043425: bHLH transcription factor binding7.77E-04
24GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity7.77E-04
25GO:0009977: proton motive force dependent protein transmembrane transporter activity7.77E-04
26GO:0033741: adenylyl-sulfate reductase (glutathione) activity7.77E-04
27GO:0102083: 7,8-dihydromonapterin aldolase activity7.77E-04
28GO:0004312: fatty acid synthase activity7.77E-04
29GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity7.77E-04
30GO:0009973: adenylyl-sulfate reductase activity7.77E-04
31GO:0080097: L-tryptophan:pyruvate aminotransferase activity7.77E-04
32GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity7.77E-04
33GO:0004805: trehalose-phosphatase activity7.93E-04
34GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity1.26E-03
35GO:0070330: aromatase activity1.26E-03
36GO:0003999: adenine phosphoribosyltransferase activity1.81E-03
37GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity1.81E-03
38GO:0052656: L-isoleucine transaminase activity1.81E-03
39GO:0052654: L-leucine transaminase activity1.81E-03
40GO:0052655: L-valine transaminase activity1.81E-03
41GO:0035529: NADH pyrophosphatase activity1.81E-03
42GO:0000254: C-4 methylsterol oxidase activity1.81E-03
43GO:0008017: microtubule binding2.32E-03
44GO:0009044: xylan 1,4-beta-xylosidase activity2.44E-03
45GO:0004084: branched-chain-amino-acid transaminase activity2.44E-03
46GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.44E-03
47GO:0046556: alpha-L-arabinofuranosidase activity2.44E-03
48GO:0001053: plastid sigma factor activity2.44E-03
49GO:0004737: pyruvate decarboxylase activity2.44E-03
50GO:0008409: 5'-3' exonuclease activity2.44E-03
51GO:0016985: mannan endo-1,4-beta-mannosidase activity2.44E-03
52GO:0080032: methyl jasmonate esterase activity2.44E-03
53GO:0016987: sigma factor activity2.44E-03
54GO:0030570: pectate lyase activity2.66E-03
55GO:0016773: phosphotransferase activity, alcohol group as acceptor3.11E-03
56GO:0018685: alkane 1-monooxygenase activity3.11E-03
57GO:0004040: amidase activity3.11E-03
58GO:0004372: glycine hydroxymethyltransferase activity3.11E-03
59GO:0016846: carbon-sulfur lyase activity3.11E-03
60GO:0000210: NAD+ diphosphatase activity3.85E-03
61GO:0016208: AMP binding3.85E-03
62GO:0016462: pyrophosphatase activity3.85E-03
63GO:0042578: phosphoric ester hydrolase activity3.85E-03
64GO:0008519: ammonium transmembrane transporter activity3.85E-03
65GO:0030976: thiamine pyrophosphate binding3.85E-03
66GO:0004709: MAP kinase kinase kinase activity3.85E-03
67GO:0016832: aldehyde-lyase activity4.64E-03
68GO:0003730: mRNA 3'-UTR binding4.64E-03
69GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.64E-03
70GO:0004124: cysteine synthase activity4.64E-03
71GO:0003872: 6-phosphofructokinase activity5.48E-03
72GO:0043022: ribosome binding6.37E-03
73GO:0016829: lyase activity7.57E-03
74GO:0030247: polysaccharide binding7.67E-03
75GO:0004871: signal transducer activity8.26E-03
76GO:0003747: translation release factor activity8.29E-03
77GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.45E-03
78GO:0005089: Rho guanyl-nucleotide exchange factor activity1.15E-02
79GO:0008794: arsenate reductase (glutaredoxin) activity1.15E-02
80GO:0000175: 3'-5'-exoribonuclease activity1.39E-02
81GO:0004022: alcohol dehydrogenase (NAD) activity1.39E-02
82GO:0005262: calcium channel activity1.39E-02
83GO:0008131: primary amine oxidase activity1.51E-02
84GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.51E-02
85GO:0043621: protein self-association1.51E-02
86GO:0004970: ionotropic glutamate receptor activity1.64E-02
87GO:0005217: intracellular ligand-gated ion channel activity1.64E-02
88GO:0004190: aspartic-type endopeptidase activity1.64E-02
89GO:0003887: DNA-directed DNA polymerase activity1.77E-02
90GO:0016788: hydrolase activity, acting on ester bonds1.84E-02
91GO:0003714: transcription corepressor activity1.90E-02
92GO:0005528: FK506 binding1.90E-02
93GO:0015079: potassium ion transmembrane transporter activity2.04E-02
94GO:0019706: protein-cysteine S-palmitoyltransferase activity2.18E-02
95GO:0008408: 3'-5' exonuclease activity2.18E-02
96GO:0005506: iron ion binding2.46E-02
97GO:0016874: ligase activity2.53E-02
98GO:0003727: single-stranded RNA binding2.63E-02
99GO:0052689: carboxylic ester hydrolase activity2.68E-02
100GO:0008536: Ran GTPase binding3.11E-02
101GO:0010181: FMN binding3.27E-02
102GO:0005355: glucose transmembrane transporter activity3.27E-02
103GO:0016740: transferase activity3.34E-02
104GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.46E-02
105GO:0004252: serine-type endopeptidase activity3.73E-02
106GO:0000156: phosphorelay response regulator activity3.96E-02
107GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.96E-02
108GO:0051015: actin filament binding3.96E-02
109GO:0016791: phosphatase activity4.14E-02
110GO:0019825: oxygen binding4.18E-02
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Gene type



Gene DE type