Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G15215

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035884: arabinan biosynthetic process0.00E+00
2GO:0070455: positive regulation of heme biosynthetic process0.00E+00
3GO:0045184: establishment of protein localization0.00E+00
4GO:0009606: tropism0.00E+00
5GO:1903224: regulation of endodermal cell differentiation0.00E+00
6GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
7GO:0015843: methylammonium transport0.00E+00
8GO:1901333: positive regulation of lateral root development0.00E+00
9GO:0042794: rRNA transcription from plastid promoter0.00E+00
10GO:0042793: transcription from plastid promoter6.60E-09
11GO:0009451: RNA modification1.63E-06
12GO:0046620: regulation of organ growth5.53E-06
13GO:0009926: auxin polar transport1.20E-05
14GO:0009734: auxin-activated signaling pathway1.10E-04
15GO:0000105: histidine biosynthetic process2.45E-04
16GO:0090558: plant epidermis development2.60E-04
17GO:1903866: palisade mesophyll development2.60E-04
18GO:0010376: stomatal complex formation2.60E-04
19GO:0010480: microsporocyte differentiation2.60E-04
20GO:0035987: endodermal cell differentiation2.60E-04
21GO:0043609: regulation of carbon utilization2.60E-04
22GO:0050891: multicellular organismal water homeostasis2.60E-04
23GO:0034757: negative regulation of iron ion transport2.60E-04
24GO:0042659: regulation of cell fate specification2.60E-04
25GO:0009733: response to auxin3.77E-04
26GO:0009658: chloroplast organization4.13E-04
27GO:1902326: positive regulation of chlorophyll biosynthetic process5.74E-04
28GO:0010235: guard mother cell cytokinesis5.74E-04
29GO:0009629: response to gravity5.74E-04
30GO:0010271: regulation of chlorophyll catabolic process5.74E-04
31GO:0071497: cellular response to freezing5.74E-04
32GO:0099402: plant organ development5.74E-04
33GO:0009662: etioplast organization5.74E-04
34GO:1904143: positive regulation of carotenoid biosynthetic process5.74E-04
35GO:0080009: mRNA methylation5.74E-04
36GO:0006597: spermine biosynthetic process5.74E-04
37GO:0061087: positive regulation of histone H3-K27 methylation5.74E-04
38GO:0009767: photosynthetic electron transport chain7.57E-04
39GO:0006000: fructose metabolic process9.31E-04
40GO:0080117: secondary growth9.31E-04
41GO:1902806: regulation of cell cycle G1/S phase transition9.31E-04
42GO:0090391: granum assembly9.31E-04
43GO:0090436: leaf pavement cell development9.31E-04
44GO:0001578: microtubule bundle formation9.31E-04
45GO:0006557: S-adenosylmethioninamine biosynthetic process9.31E-04
46GO:0090708: specification of plant organ axis polarity9.31E-04
47GO:0044211: CTP salvage1.33E-03
48GO:0009800: cinnamic acid biosynthetic process1.33E-03
49GO:0033014: tetrapyrrole biosynthetic process1.33E-03
50GO:0015696: ammonium transport1.33E-03
51GO:0046739: transport of virus in multicellular host1.33E-03
52GO:2000904: regulation of starch metabolic process1.33E-03
53GO:0051289: protein homotetramerization1.33E-03
54GO:0043572: plastid fission1.33E-03
55GO:1902476: chloride transmembrane transport1.33E-03
56GO:0010239: chloroplast mRNA processing1.33E-03
57GO:0016998: cell wall macromolecule catabolic process1.41E-03
58GO:0008295: spermidine biosynthetic process1.78E-03
59GO:1901002: positive regulation of response to salt stress1.78E-03
60GO:0044206: UMP salvage1.78E-03
61GO:0030104: water homeostasis1.78E-03
62GO:0046656: folic acid biosynthetic process1.78E-03
63GO:0006021: inositol biosynthetic process1.78E-03
64GO:1901141: regulation of lignin biosynthetic process1.78E-03
65GO:0051322: anaphase1.78E-03
66GO:1902584: positive regulation of response to water deprivation1.78E-03
67GO:0072488: ammonium transmembrane transport1.78E-03
68GO:0009904: chloroplast accumulation movement2.27E-03
69GO:0048497: maintenance of floral organ identity2.27E-03
70GO:0010315: auxin efflux2.80E-03
71GO:0006559: L-phenylalanine catabolic process2.80E-03
72GO:0006206: pyrimidine nucleobase metabolic process2.80E-03
73GO:0009913: epidermal cell differentiation2.80E-03
74GO:1902456: regulation of stomatal opening2.80E-03
75GO:0048831: regulation of shoot system development2.80E-03
76GO:0032502: developmental process3.02E-03
77GO:1901259: chloroplast rRNA processing3.36E-03
78GO:0048509: regulation of meristem development3.36E-03
79GO:0046654: tetrahydrofolate biosynthetic process3.36E-03
80GO:0009903: chloroplast avoidance movement3.36E-03
81GO:0030488: tRNA methylation3.36E-03
82GO:0009554: megasporogenesis3.36E-03
83GO:2000037: regulation of stomatal complex patterning3.36E-03
84GO:2000067: regulation of root morphogenesis3.36E-03
85GO:0009955: adaxial/abaxial pattern specification3.36E-03
86GO:0071470: cellular response to osmotic stress3.36E-03
87GO:0048437: floral organ development3.97E-03
88GO:0009396: folic acid-containing compound biosynthetic process3.97E-03
89GO:0006821: chloride transport3.97E-03
90GO:0010444: guard mother cell differentiation3.97E-03
91GO:0006955: immune response3.97E-03
92GO:0007050: cell cycle arrest3.97E-03
93GO:0010027: thylakoid membrane organization4.08E-03
94GO:0042255: ribosome assembly4.60E-03
95GO:0006353: DNA-templated transcription, termination4.60E-03
96GO:0048766: root hair initiation4.60E-03
97GO:0001522: pseudouridine synthesis4.60E-03
98GO:0032875: regulation of DNA endoreduplication4.60E-03
99GO:0055075: potassium ion homeostasis4.60E-03
100GO:0010497: plasmodesmata-mediated intercellular transport5.27E-03
101GO:0010052: guard cell differentiation5.27E-03
102GO:0007389: pattern specification process5.27E-03
103GO:0006002: fructose 6-phosphate metabolic process5.27E-03
104GO:0000160: phosphorelay signal transduction system5.59E-03
105GO:0006783: heme biosynthetic process5.98E-03
106GO:0000373: Group II intron splicing5.98E-03
107GO:0042761: very long-chain fatty acid biosynthetic process6.71E-03
108GO:2000280: regulation of root development6.71E-03
109GO:0031627: telomeric loop formation7.47E-03
110GO:0009089: lysine biosynthetic process via diaminopimelate8.27E-03
111GO:0048229: gametophyte development8.27E-03
112GO:0000266: mitochondrial fission9.09E-03
113GO:0006790: sulfur compound metabolic process9.09E-03
114GO:0010075: regulation of meristem growth9.94E-03
115GO:0010020: chloroplast fission1.08E-02
116GO:0009934: regulation of meristem structural organization1.08E-02
117GO:0090351: seedling development1.17E-02
118GO:0046854: phosphatidylinositol phosphorylation1.17E-02
119GO:0009736: cytokinin-activated signaling pathway1.18E-02
120GO:0009416: response to light stimulus1.24E-02
121GO:0006071: glycerol metabolic process1.27E-02
122GO:0006833: water transport1.27E-02
123GO:0000027: ribosomal large subunit assembly1.36E-02
124GO:0051302: regulation of cell division1.46E-02
125GO:0009793: embryo development ending in seed dormancy1.75E-02
126GO:0071215: cellular response to abscisic acid stimulus1.77E-02
127GO:0010082: regulation of root meristem growth1.77E-02
128GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.77E-02
129GO:0006284: base-excision repair1.88E-02
130GO:0070417: cellular response to cold1.99E-02
131GO:0016042: lipid catabolic process2.06E-02
132GO:0000226: microtubule cytoskeleton organization2.11E-02
133GO:0080022: primary root development2.11E-02
134GO:0010087: phloem or xylem histogenesis2.11E-02
135GO:0010118: stomatal movement2.11E-02
136GO:0048653: anther development2.11E-02
137GO:0009958: positive gravitropism2.22E-02
138GO:0009741: response to brassinosteroid2.22E-02
139GO:0048544: recognition of pollen2.34E-02
140GO:0007018: microtubule-based movement2.34E-02
141GO:0009646: response to absence of light2.34E-02
142GO:0009791: post-embryonic development2.46E-02
143GO:0009790: embryo development2.46E-02
144GO:0048825: cotyledon development2.46E-02
145GO:0009851: auxin biosynthetic process2.46E-02
146GO:0080156: mitochondrial mRNA modification2.58E-02
147GO:0010583: response to cyclopentenone2.70E-02
148GO:0019761: glucosinolate biosynthetic process2.70E-02
149GO:0009630: gravitropism2.70E-02
150GO:0010252: auxin homeostasis2.96E-02
151GO:0009828: plant-type cell wall loosening2.96E-02
152GO:0006357: regulation of transcription from RNA polymerase II promoter3.03E-02
153GO:0000910: cytokinesis3.22E-02
154GO:0007166: cell surface receptor signaling pathway3.32E-02
155GO:0001666: response to hypoxia3.35E-02
156GO:0008380: RNA splicing3.46E-02
157GO:0010029: regulation of seed germination3.49E-02
158GO:0006974: cellular response to DNA damage stimulus3.63E-02
159GO:0015995: chlorophyll biosynthetic process3.77E-02
160GO:0010411: xyloglucan metabolic process3.77E-02
161GO:0010311: lateral root formation4.20E-02
162GO:0009832: plant-type cell wall biogenesis4.20E-02
163GO:0048767: root hair elongation4.20E-02
164GO:0006499: N-terminal protein myristoylation4.34E-02
165GO:0009631: cold acclimation4.49E-02
166GO:0009637: response to blue light4.79E-02
167GO:0034599: cellular response to oxidative stress4.94E-02
RankGO TermAdjusted P value
1GO:0004401: histidinol-phosphatase activity0.00E+00
2GO:0071633: dihydroceramidase activity0.00E+00
3GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
4GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
5GO:0070009: serine-type aminopeptidase activity0.00E+00
6GO:0052834: inositol monophosphate phosphatase activity0.00E+00
7GO:0004519: endonuclease activity5.38E-05
8GO:0042834: peptidoglycan binding2.60E-04
9GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity2.60E-04
10GO:0004156: dihydropteroate synthase activity2.60E-04
11GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity2.60E-04
12GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity2.60E-04
13GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity2.60E-04
14GO:0010347: L-galactose-1-phosphate phosphatase activity2.60E-04
15GO:0004016: adenylate cyclase activity2.60E-04
16GO:0004400: histidinol-phosphate transaminase activity2.60E-04
17GO:0008836: diaminopimelate decarboxylase activity2.60E-04
18GO:0003723: RNA binding4.58E-04
19GO:0008934: inositol monophosphate 1-phosphatase activity5.74E-04
20GO:0052833: inositol monophosphate 4-phosphatase activity5.74E-04
21GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity5.74E-04
22GO:0009884: cytokinin receptor activity5.74E-04
23GO:0052832: inositol monophosphate 3-phosphatase activity5.74E-04
24GO:0009982: pseudouridine synthase activity7.57E-04
25GO:0017150: tRNA dihydrouridine synthase activity9.31E-04
26GO:0045548: phenylalanine ammonia-lyase activity9.31E-04
27GO:0005034: osmosensor activity9.31E-04
28GO:0004014: adenosylmethionine decarboxylase activity9.31E-04
29GO:0001872: (1->3)-beta-D-glucan binding1.33E-03
30GO:0043495: protein anchor1.78E-03
31GO:0005253: anion channel activity1.78E-03
32GO:0004845: uracil phosphoribosyltransferase activity1.78E-03
33GO:0016773: phosphotransferase activity, alcohol group as acceptor2.27E-03
34GO:0008725: DNA-3-methyladenine glycosylase activity2.27E-03
35GO:0008519: ammonium transmembrane transporter activity2.80E-03
36GO:0005247: voltage-gated chloride channel activity2.80E-03
37GO:2001070: starch binding2.80E-03
38GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity3.36E-03
39GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.36E-03
40GO:0004849: uridine kinase activity3.36E-03
41GO:0019900: kinase binding3.36E-03
42GO:0008195: phosphatidate phosphatase activity3.36E-03
43GO:0019843: rRNA binding3.77E-03
44GO:0008889: glycerophosphodiester phosphodiesterase activity5.98E-03
45GO:0009672: auxin:proton symporter activity6.71E-03
46GO:0004673: protein histidine kinase activity7.47E-03
47GO:0003691: double-stranded telomeric DNA binding8.27E-03
48GO:0005089: Rho guanyl-nucleotide exchange factor activity8.27E-03
49GO:0010329: auxin efflux transmembrane transporter activity9.94E-03
50GO:0004022: alcohol dehydrogenase (NAD) activity9.94E-03
51GO:0031072: heat shock protein binding9.94E-03
52GO:0000155: phosphorelay sensor kinase activity9.94E-03
53GO:0016788: hydrolase activity, acting on ester bonds1.02E-02
54GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.08E-02
55GO:0003777: microtubule motor activity1.30E-02
56GO:0005345: purine nucleobase transmembrane transporter activity1.46E-02
57GO:0043424: protein histidine kinase binding1.46E-02
58GO:0052689: carboxylic ester hydrolase activity1.48E-02
59GO:0004707: MAP kinase activity1.56E-02
60GO:0033612: receptor serine/threonine kinase binding1.56E-02
61GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.64E-02
62GO:0003727: single-stranded RNA binding1.88E-02
63GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.88E-02
64GO:0003713: transcription coactivator activity2.22E-02
65GO:0005199: structural constituent of cell wall2.22E-02
66GO:0010181: FMN binding2.34E-02
67GO:0019901: protein kinase binding2.46E-02
68GO:0016762: xyloglucan:xyloglucosyl transferase activity2.58E-02
69GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.71E-02
70GO:0000156: phosphorelay response regulator activity2.83E-02
71GO:0008017: microtubule binding3.04E-02
72GO:0051213: dioxygenase activity3.35E-02
73GO:0003735: structural constituent of ribosome3.62E-02
74GO:0042802: identical protein binding3.69E-02
75GO:0030247: polysaccharide binding3.77E-02
76GO:0016798: hydrolase activity, acting on glycosyl bonds3.77E-02
77GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.49E-02
78GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.79E-02
79GO:0003993: acid phosphatase activity4.94E-02
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Gene type



Gene DE type