GO Enrichment Analysis of Co-expressed Genes with
AT1G13860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 2 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 3 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 4 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 5 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 6 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 7 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 8 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 9 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 10 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 11 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 12 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.61E-05 |
| 13 | GO:0006021: inositol biosynthetic process | 9.87E-05 |
| 14 | GO:0010207: photosystem II assembly | 1.30E-04 |
| 15 | GO:0048511: rhythmic process | 2.74E-04 |
| 16 | GO:0009648: photoperiodism | 2.94E-04 |
| 17 | GO:0009395: phospholipid catabolic process | 3.80E-04 |
| 18 | GO:0000481: maturation of 5S rRNA | 4.07E-04 |
| 19 | GO:0006659: phosphatidylserine biosynthetic process | 4.07E-04 |
| 20 | GO:0015801: aromatic amino acid transport | 4.07E-04 |
| 21 | GO:0042547: cell wall modification involved in multidimensional cell growth | 4.07E-04 |
| 22 | GO:0043686: co-translational protein modification | 4.07E-04 |
| 23 | GO:1990542: mitochondrial transmembrane transport | 4.07E-04 |
| 24 | GO:1902458: positive regulation of stomatal opening | 4.07E-04 |
| 25 | GO:0034337: RNA folding | 4.07E-04 |
| 26 | GO:0000476: maturation of 4.5S rRNA | 4.07E-04 |
| 27 | GO:0009443: pyridoxal 5'-phosphate salvage | 4.07E-04 |
| 28 | GO:0000967: rRNA 5'-end processing | 4.07E-04 |
| 29 | GO:0031426: polycistronic mRNA processing | 4.07E-04 |
| 30 | GO:1900865: chloroplast RNA modification | 8.21E-04 |
| 31 | GO:0006435: threonyl-tRNA aminoacylation | 8.83E-04 |
| 32 | GO:0006432: phenylalanyl-tRNA aminoacylation | 8.83E-04 |
| 33 | GO:0090342: regulation of cell aging | 8.83E-04 |
| 34 | GO:1900033: negative regulation of trichome patterning | 8.83E-04 |
| 35 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 8.83E-04 |
| 36 | GO:0051262: protein tetramerization | 8.83E-04 |
| 37 | GO:0034470: ncRNA processing | 8.83E-04 |
| 38 | GO:1900871: chloroplast mRNA modification | 8.83E-04 |
| 39 | GO:0006415: translational termination | 1.10E-03 |
| 40 | GO:0010027: thylakoid membrane organization | 1.10E-03 |
| 41 | GO:0009773: photosynthetic electron transport in photosystem I | 1.10E-03 |
| 42 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.25E-03 |
| 43 | GO:0010589: leaf proximal/distal pattern formation | 1.43E-03 |
| 44 | GO:0015940: pantothenate biosynthetic process | 1.43E-03 |
| 45 | GO:0001578: microtubule bundle formation | 1.43E-03 |
| 46 | GO:0045493: xylan catabolic process | 1.43E-03 |
| 47 | GO:0033591: response to L-ascorbic acid | 1.43E-03 |
| 48 | GO:0000162: tryptophan biosynthetic process | 2.01E-03 |
| 49 | GO:0006168: adenine salvage | 2.07E-03 |
| 50 | GO:0010371: regulation of gibberellin biosynthetic process | 2.07E-03 |
| 51 | GO:0006166: purine ribonucleoside salvage | 2.07E-03 |
| 52 | GO:0009102: biotin biosynthetic process | 2.07E-03 |
| 53 | GO:0010239: chloroplast mRNA processing | 2.07E-03 |
| 54 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 2.07E-03 |
| 55 | GO:0006424: glutamyl-tRNA aminoacylation | 2.07E-03 |
| 56 | GO:0032366: intracellular sterol transport | 2.78E-03 |
| 57 | GO:0048629: trichome patterning | 2.78E-03 |
| 58 | GO:0051322: anaphase | 2.78E-03 |
| 59 | GO:0009765: photosynthesis, light harvesting | 2.78E-03 |
| 60 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 2.78E-03 |
| 61 | GO:0022622: root system development | 2.78E-03 |
| 62 | GO:0007020: microtubule nucleation | 2.78E-03 |
| 63 | GO:0032543: mitochondrial translation | 3.56E-03 |
| 64 | GO:0045038: protein import into chloroplast thylakoid membrane | 3.56E-03 |
| 65 | GO:0031365: N-terminal protein amino acid modification | 3.56E-03 |
| 66 | GO:0016123: xanthophyll biosynthetic process | 3.56E-03 |
| 67 | GO:0044209: AMP salvage | 3.56E-03 |
| 68 | GO:0080110: sporopollenin biosynthetic process | 3.56E-03 |
| 69 | GO:0046785: microtubule polymerization | 3.56E-03 |
| 70 | GO:0016120: carotene biosynthetic process | 3.56E-03 |
| 71 | GO:0046855: inositol phosphate dephosphorylation | 4.41E-03 |
| 72 | GO:0042549: photosystem II stabilization | 4.41E-03 |
| 73 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 4.41E-03 |
| 74 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 4.41E-03 |
| 75 | GO:0016554: cytidine to uridine editing | 4.41E-03 |
| 76 | GO:0006655: phosphatidylglycerol biosynthetic process | 4.41E-03 |
| 77 | GO:0032973: amino acid export | 4.41E-03 |
| 78 | GO:0010190: cytochrome b6f complex assembly | 4.41E-03 |
| 79 | GO:0009958: positive gravitropism | 4.43E-03 |
| 80 | GO:0009791: post-embryonic development | 5.11E-03 |
| 81 | GO:0048280: vesicle fusion with Golgi apparatus | 5.31E-03 |
| 82 | GO:0030488: tRNA methylation | 5.31E-03 |
| 83 | GO:0010310: regulation of hydrogen peroxide metabolic process | 5.31E-03 |
| 84 | GO:0006400: tRNA modification | 6.28E-03 |
| 85 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 6.28E-03 |
| 86 | GO:0032880: regulation of protein localization | 6.28E-03 |
| 87 | GO:0048528: post-embryonic root development | 6.28E-03 |
| 88 | GO:0043090: amino acid import | 6.28E-03 |
| 89 | GO:0010078: maintenance of root meristem identity | 7.30E-03 |
| 90 | GO:0032508: DNA duplex unwinding | 7.30E-03 |
| 91 | GO:2000070: regulation of response to water deprivation | 7.30E-03 |
| 92 | GO:0000105: histidine biosynthetic process | 7.30E-03 |
| 93 | GO:0032544: plastid translation | 8.38E-03 |
| 94 | GO:0043562: cellular response to nitrogen levels | 8.38E-03 |
| 95 | GO:0071482: cellular response to light stimulus | 8.38E-03 |
| 96 | GO:0022900: electron transport chain | 8.38E-03 |
| 97 | GO:0015996: chlorophyll catabolic process | 8.38E-03 |
| 98 | GO:0007186: G-protein coupled receptor signaling pathway | 8.38E-03 |
| 99 | GO:0009657: plastid organization | 8.38E-03 |
| 100 | GO:0009627: systemic acquired resistance | 8.86E-03 |
| 101 | GO:0015995: chlorophyll biosynthetic process | 9.35E-03 |
| 102 | GO:0006783: heme biosynthetic process | 9.51E-03 |
| 103 | GO:0009821: alkaloid biosynthetic process | 9.51E-03 |
| 104 | GO:0010206: photosystem II repair | 9.51E-03 |
| 105 | GO:0048507: meristem development | 9.51E-03 |
| 106 | GO:0080144: amino acid homeostasis | 9.51E-03 |
| 107 | GO:0016311: dephosphorylation | 9.85E-03 |
| 108 | GO:0010267: production of ta-siRNAs involved in RNA interference | 1.07E-02 |
| 109 | GO:0010629: negative regulation of gene expression | 1.19E-02 |
| 110 | GO:0006896: Golgi to vacuole transport | 1.19E-02 |
| 111 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.19E-02 |
| 112 | GO:0007568: aging | 1.20E-02 |
| 113 | GO:0048527: lateral root development | 1.20E-02 |
| 114 | GO:0009684: indoleacetic acid biosynthetic process | 1.32E-02 |
| 115 | GO:0019684: photosynthesis, light reaction | 1.32E-02 |
| 116 | GO:0008285: negative regulation of cell proliferation | 1.32E-02 |
| 117 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.32E-02 |
| 118 | GO:0045087: innate immune response | 1.32E-02 |
| 119 | GO:0045490: pectin catabolic process | 1.33E-02 |
| 120 | GO:0006790: sulfur compound metabolic process | 1.46E-02 |
| 121 | GO:0045037: protein import into chloroplast stroma | 1.46E-02 |
| 122 | GO:0007166: cell surface receptor signaling pathway | 1.57E-02 |
| 123 | GO:0006631: fatty acid metabolic process | 1.57E-02 |
| 124 | GO:0009725: response to hormone | 1.59E-02 |
| 125 | GO:0010588: cotyledon vascular tissue pattern formation | 1.59E-02 |
| 126 | GO:2000012: regulation of auxin polar transport | 1.59E-02 |
| 127 | GO:0009266: response to temperature stimulus | 1.74E-02 |
| 128 | GO:0048467: gynoecium development | 1.74E-02 |
| 129 | GO:0010143: cutin biosynthetic process | 1.74E-02 |
| 130 | GO:0006541: glutamine metabolic process | 1.74E-02 |
| 131 | GO:0046854: phosphatidylinositol phosphorylation | 1.88E-02 |
| 132 | GO:0019853: L-ascorbic acid biosynthetic process | 1.88E-02 |
| 133 | GO:0006855: drug transmembrane transport | 1.99E-02 |
| 134 | GO:0042753: positive regulation of circadian rhythm | 2.04E-02 |
| 135 | GO:0010073: meristem maintenance | 2.35E-02 |
| 136 | GO:0006418: tRNA aminoacylation for protein translation | 2.35E-02 |
| 137 | GO:0043622: cortical microtubule organization | 2.35E-02 |
| 138 | GO:0003333: amino acid transmembrane transport | 2.51E-02 |
| 139 | GO:0061077: chaperone-mediated protein folding | 2.51E-02 |
| 140 | GO:0031348: negative regulation of defense response | 2.68E-02 |
| 141 | GO:0080092: regulation of pollen tube growth | 2.68E-02 |
| 142 | GO:0010017: red or far-red light signaling pathway | 2.68E-02 |
| 143 | GO:0009814: defense response, incompatible interaction | 2.68E-02 |
| 144 | GO:0010227: floral organ abscission | 2.85E-02 |
| 145 | GO:0010584: pollen exine formation | 3.03E-02 |
| 146 | GO:0019722: calcium-mediated signaling | 3.03E-02 |
| 147 | GO:0016117: carotenoid biosynthetic process | 3.21E-02 |
| 148 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.21E-02 |
| 149 | GO:0042147: retrograde transport, endosome to Golgi | 3.21E-02 |
| 150 | GO:0008284: positive regulation of cell proliferation | 3.21E-02 |
| 151 | GO:0009416: response to light stimulus | 3.34E-02 |
| 152 | GO:0006396: RNA processing | 3.37E-02 |
| 153 | GO:0080022: primary root development | 3.39E-02 |
| 154 | GO:0000413: protein peptidyl-prolyl isomerization | 3.39E-02 |
| 155 | GO:0010087: phloem or xylem histogenesis | 3.39E-02 |
| 156 | GO:0042335: cuticle development | 3.39E-02 |
| 157 | GO:0010305: leaf vascular tissue pattern formation | 3.58E-02 |
| 158 | GO:0010182: sugar mediated signaling pathway | 3.58E-02 |
| 159 | GO:0007018: microtubule-based movement | 3.77E-02 |
| 160 | GO:0042752: regulation of circadian rhythm | 3.77E-02 |
| 161 | GO:0008654: phospholipid biosynthetic process | 3.96E-02 |
| 162 | GO:0009851: auxin biosynthetic process | 3.96E-02 |
| 163 | GO:0006623: protein targeting to vacuole | 3.96E-02 |
| 164 | GO:0048825: cotyledon development | 3.96E-02 |
| 165 | GO:0000302: response to reactive oxygen species | 4.15E-02 |
| 166 | GO:0006891: intra-Golgi vesicle-mediated transport | 4.15E-02 |
| 167 | GO:0016032: viral process | 4.35E-02 |
| 168 | GO:0016042: lipid catabolic process | 4.71E-02 |
| 169 | GO:0007267: cell-cell signaling | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 2 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 3 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 4 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 5 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 6 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 8 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 9 | GO:0019144: ADP-sugar diphosphatase activity | 0.00E+00 |
| 10 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 11 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 12 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 13 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 14 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 15 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 16 | GO:0016149: translation release factor activity, codon specific | 5.61E-05 |
| 17 | GO:0016851: magnesium chelatase activity | 5.61E-05 |
| 18 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.95E-05 |
| 19 | GO:0005528: FK506 binding | 2.09E-04 |
| 20 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.19E-04 |
| 21 | GO:0016788: hydrolase activity, acting on ester bonds | 3.11E-04 |
| 22 | GO:0003993: acid phosphatase activity | 3.35E-04 |
| 23 | GO:0030570: pectate lyase activity | 3.49E-04 |
| 24 | GO:0042586: peptide deformylase activity | 4.07E-04 |
| 25 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 4.07E-04 |
| 26 | GO:0005227: calcium activated cation channel activity | 4.07E-04 |
| 27 | GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 4.07E-04 |
| 28 | GO:0080042: ADP-glucose pyrophosphohydrolase activity | 4.07E-04 |
| 29 | GO:0004856: xylulokinase activity | 4.07E-04 |
| 30 | GO:0009496: plastoquinol--plastocyanin reductase activity | 4.07E-04 |
| 31 | GO:0004853: uroporphyrinogen decarboxylase activity | 4.07E-04 |
| 32 | GO:0003747: translation release factor activity | 6.96E-04 |
| 33 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 8.83E-04 |
| 34 | GO:0080041: ADP-ribose pyrophosphohydrolase activity | 8.83E-04 |
| 35 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 8.83E-04 |
| 36 | GO:0052832: inositol monophosphate 3-phosphatase activity | 8.83E-04 |
| 37 | GO:0015173: aromatic amino acid transmembrane transporter activity | 8.83E-04 |
| 38 | GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity | 8.83E-04 |
| 39 | GO:0008934: inositol monophosphate 1-phosphatase activity | 8.83E-04 |
| 40 | GO:0052833: inositol monophosphate 4-phosphatase activity | 8.83E-04 |
| 41 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 8.83E-04 |
| 42 | GO:0004826: phenylalanine-tRNA ligase activity | 8.83E-04 |
| 43 | GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity | 8.83E-04 |
| 44 | GO:0004829: threonine-tRNA ligase activity | 8.83E-04 |
| 45 | GO:0004512: inositol-3-phosphate synthase activity | 8.83E-04 |
| 46 | GO:0000049: tRNA binding | 1.25E-03 |
| 47 | GO:0016787: hydrolase activity | 1.26E-03 |
| 48 | GO:0031072: heat shock protein binding | 1.42E-03 |
| 49 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.43E-03 |
| 50 | GO:0030267: glyoxylate reductase (NADP) activity | 1.43E-03 |
| 51 | GO:0070402: NADPH binding | 1.43E-03 |
| 52 | GO:0004049: anthranilate synthase activity | 1.43E-03 |
| 53 | GO:0004180: carboxypeptidase activity | 1.43E-03 |
| 54 | GO:0002161: aminoacyl-tRNA editing activity | 1.43E-03 |
| 55 | GO:0005504: fatty acid binding | 1.43E-03 |
| 56 | GO:0008236: serine-type peptidase activity | 1.44E-03 |
| 57 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 2.07E-03 |
| 58 | GO:0035198: miRNA binding | 2.07E-03 |
| 59 | GO:0017077: oxidative phosphorylation uncoupler activity | 2.07E-03 |
| 60 | GO:0048027: mRNA 5'-UTR binding | 2.07E-03 |
| 61 | GO:0003999: adenine phosphoribosyltransferase activity | 2.07E-03 |
| 62 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.78E-03 |
| 63 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.78E-03 |
| 64 | GO:0004045: aminoacyl-tRNA hydrolase activity | 2.78E-03 |
| 65 | GO:0045430: chalcone isomerase activity | 2.78E-03 |
| 66 | GO:0009044: xylan 1,4-beta-xylosidase activity | 2.78E-03 |
| 67 | GO:0004040: amidase activity | 3.56E-03 |
| 68 | GO:0005275: amine transmembrane transporter activity | 3.56E-03 |
| 69 | GO:0016846: carbon-sulfur lyase activity | 3.56E-03 |
| 70 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 3.56E-03 |
| 71 | GO:0042578: phosphoric ester hydrolase activity | 4.41E-03 |
| 72 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 4.41E-03 |
| 73 | GO:0000293: ferric-chelate reductase activity | 4.41E-03 |
| 74 | GO:0009927: histidine phosphotransfer kinase activity | 5.31E-03 |
| 75 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 5.31E-03 |
| 76 | GO:0051920: peroxiredoxin activity | 5.31E-03 |
| 77 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 5.31E-03 |
| 78 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 5.31E-03 |
| 79 | GO:0005261: cation channel activity | 5.31E-03 |
| 80 | GO:0048038: quinone binding | 5.47E-03 |
| 81 | GO:0043022: ribosome binding | 7.30E-03 |
| 82 | GO:0016209: antioxidant activity | 7.30E-03 |
| 83 | GO:0004033: aldo-keto reductase (NADP) activity | 7.30E-03 |
| 84 | GO:0016491: oxidoreductase activity | 7.91E-03 |
| 85 | GO:0008173: RNA methyltransferase activity | 8.38E-03 |
| 86 | GO:0016829: lyase activity | 9.73E-03 |
| 87 | GO:0016844: strictosidine synthase activity | 1.07E-02 |
| 88 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.21E-02 |
| 89 | GO:0047372: acylglycerol lipase activity | 1.32E-02 |
| 90 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.32E-02 |
| 91 | GO:0008017: microtubule binding | 1.41E-02 |
| 92 | GO:0003725: double-stranded RNA binding | 1.59E-02 |
| 93 | GO:0008266: poly(U) RNA binding | 1.74E-02 |
| 94 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.74E-02 |
| 95 | GO:0008083: growth factor activity | 1.74E-02 |
| 96 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.84E-02 |
| 97 | GO:0035091: phosphatidylinositol binding | 1.84E-02 |
| 98 | GO:0003723: RNA binding | 1.93E-02 |
| 99 | GO:0051087: chaperone binding | 2.35E-02 |
| 100 | GO:0003777: microtubule motor activity | 2.55E-02 |
| 101 | GO:0003756: protein disulfide isomerase activity | 3.03E-02 |
| 102 | GO:0004812: aminoacyl-tRNA ligase activity | 3.21E-02 |
| 103 | GO:0051082: unfolded protein binding | 3.27E-02 |
| 104 | GO:0052689: carboxylic ester hydrolase activity | 3.42E-02 |
| 105 | GO:0008080: N-acetyltransferase activity | 3.58E-02 |
| 106 | GO:0050662: coenzyme binding | 3.77E-02 |
| 107 | GO:0004872: receptor activity | 3.96E-02 |
| 108 | GO:0004871: signal transducer activity | 4.00E-02 |
| 109 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.20E-02 |
| 110 | GO:0004252: serine-type endopeptidase activity | 4.53E-02 |
| 111 | GO:0000156: phosphorelay response regulator activity | 4.55E-02 |
| 112 | GO:0016791: phosphatase activity | 4.76E-02 |