Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G13245

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090355: positive regulation of auxin metabolic process0.00E+00
2GO:0009661: chromoplast organization0.00E+00
3GO:0090358: positive regulation of tryptophan metabolic process0.00E+00
4GO:0033231: carbohydrate export0.00E+00
5GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
6GO:0006573: valine metabolic process0.00E+00
7GO:0006551: leucine metabolic process4.60E-05
8GO:1902334: fructose export from vacuole to cytoplasm4.60E-05
9GO:0015755: fructose transport4.60E-05
10GO:0006863: purine nucleobase transport9.77E-05
11GO:0071497: cellular response to freezing1.13E-04
12GO:1904143: positive regulation of carotenoid biosynthetic process1.13E-04
13GO:0006898: receptor-mediated endocytosis1.13E-04
14GO:0006696: ergosterol biosynthetic process1.95E-04
15GO:0015695: organic cation transport1.95E-04
16GO:0042823: pyridoxal phosphate biosynthetic process2.85E-04
17GO:0031122: cytoplasmic microtubule organization3.84E-04
18GO:0071483: cellular response to blue light3.84E-04
19GO:0009902: chloroplast relocation3.84E-04
20GO:0009755: hormone-mediated signaling pathway3.84E-04
21GO:0072488: ammonium transmembrane transport3.84E-04
22GO:0009904: chloroplast accumulation movement4.88E-04
23GO:0010236: plastoquinone biosynthetic process4.88E-04
24GO:0010438: cellular response to sulfur starvation4.88E-04
25GO:0016120: carotene biosynthetic process4.88E-04
26GO:0010315: auxin efflux5.98E-04
27GO:0009082: branched-chain amino acid biosynthetic process7.13E-04
28GO:0009099: valine biosynthetic process7.13E-04
29GO:0009903: chloroplast avoidance movement7.13E-04
30GO:0009854: oxidative photosynthetic carbon pathway7.13E-04
31GO:0010019: chloroplast-nucleus signaling pathway7.13E-04
32GO:0031930: mitochondria-nucleus signaling pathway7.13E-04
33GO:1900056: negative regulation of leaf senescence8.33E-04
34GO:0010439: regulation of glucosinolate biosynthetic process9.57E-04
35GO:2000070: regulation of response to water deprivation9.57E-04
36GO:0050821: protein stabilization9.57E-04
37GO:0009231: riboflavin biosynthetic process9.57E-04
38GO:0019827: stem cell population maintenance9.57E-04
39GO:0009819: drought recovery9.57E-04
40GO:0009097: isoleucine biosynthetic process1.09E-03
41GO:0006526: arginine biosynthetic process1.09E-03
42GO:0048354: mucilage biosynthetic process involved in seed coat development1.36E-03
43GO:0010380: regulation of chlorophyll biosynthetic process1.36E-03
44GO:0009641: shade avoidance1.51E-03
45GO:0010192: mucilage biosynthetic process1.51E-03
46GO:0006995: cellular response to nitrogen starvation1.51E-03
47GO:0019538: protein metabolic process1.51E-03
48GO:0043085: positive regulation of catalytic activity1.66E-03
49GO:0009750: response to fructose1.66E-03
50GO:2000652: regulation of secondary cell wall biogenesis1.66E-03
51GO:0009682: induced systemic resistance1.66E-03
52GO:0010105: negative regulation of ethylene-activated signaling pathway1.81E-03
53GO:0007015: actin filament organization2.14E-03
54GO:0010223: secondary shoot formation2.14E-03
55GO:0034605: cellular response to heat2.14E-03
56GO:0000162: tryptophan biosynthetic process2.49E-03
57GO:0045893: positive regulation of transcription, DNA-templated2.60E-03
58GO:0051017: actin filament bundle assembly2.67E-03
59GO:0008299: isoprenoid biosynthetic process2.85E-03
60GO:0051260: protein homooligomerization3.04E-03
61GO:0009625: response to insect3.43E-03
62GO:0070417: cellular response to cold3.83E-03
63GO:0016117: carotenoid biosynthetic process3.83E-03
64GO:0009826: unidimensional cell growth4.05E-03
65GO:0009658: chloroplast organization4.21E-03
66GO:0009646: response to absence of light4.47E-03
67GO:0009851: auxin biosynthetic process4.68E-03
68GO:0030163: protein catabolic process5.37E-03
69GO:0009627: systemic acquired resistance6.82E-03
70GO:0015995: chlorophyll biosynthetic process7.08E-03
71GO:0009751: response to salicylic acid7.57E-03
72GO:0030244: cellulose biosynthetic process7.60E-03
73GO:0000160: phosphorelay signal transduction system7.87E-03
74GO:0009813: flavonoid biosynthetic process7.87E-03
75GO:0009834: plant-type secondary cell wall biogenesis8.14E-03
76GO:0009753: response to jasmonic acid8.24E-03
77GO:0009910: negative regulation of flower development8.41E-03
78GO:0009867: jasmonic acid mediated signaling pathway8.96E-03
79GO:0009853: photorespiration8.96E-03
80GO:0006357: regulation of transcription from RNA polymerase II promoter1.02E-02
81GO:0009644: response to high light intensity1.13E-02
82GO:0009664: plant-type cell wall organization1.26E-02
83GO:0009736: cytokinin-activated signaling pathway1.32E-02
84GO:0009624: response to nematode1.70E-02
85GO:0042744: hydrogen peroxide catabolic process2.18E-02
86GO:0007623: circadian rhythm2.50E-02
87GO:0009739: response to gibberellin2.71E-02
88GO:0009414: response to water deprivation2.71E-02
89GO:0009617: response to bacterium2.84E-02
90GO:0030154: cell differentiation3.02E-02
91GO:0009723: response to ethylene3.79E-02
92GO:0006810: transport4.06E-02
93GO:0010200: response to chitin4.08E-02
94GO:0015979: photosynthesis4.37E-02
95GO:0045454: cell redox homeostasis4.52E-02
RankGO TermAdjusted P value
1GO:0070001: aspartic-type peptidase activity0.00E+00
2GO:0004055: argininosuccinate synthase activity0.00E+00
3GO:0015284: fructose uniporter activity0.00E+00
4GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
5GO:0046905: phytoene synthase activity0.00E+00
6GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity4.60E-05
7GO:0008568: microtubule-severing ATPase activity4.60E-05
8GO:0016618: hydroxypyruvate reductase activity4.60E-05
9GO:0003984: acetolactate synthase activity4.60E-05
10GO:0046906: tetrapyrrole binding4.60E-05
11GO:0051996: squalene synthase activity4.60E-05
12GO:0005353: fructose transmembrane transporter activity1.13E-04
13GO:0004310: farnesyl-diphosphate farnesyltransferase activity1.13E-04
14GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity1.13E-04
15GO:0050347: trans-octaprenyltranstransferase activity1.13E-04
16GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity1.13E-04
17GO:0005345: purine nucleobase transmembrane transporter activity1.23E-04
18GO:0030267: glyoxylate reductase (NADP) activity1.95E-04
19GO:0003935: GTP cyclohydrolase II activity1.95E-04
20GO:0080032: methyl jasmonate esterase activity3.84E-04
21GO:0047714: galactolipase activity5.98E-04
22GO:0008519: ammonium transmembrane transporter activity5.98E-04
23GO:0080030: methyl indole-3-acetate esterase activity5.98E-04
24GO:0019899: enzyme binding8.33E-04
25GO:0008970: phosphatidylcholine 1-acylhydrolase activity1.09E-03
26GO:0022857: transmembrane transporter activity1.51E-03
27GO:0004190: aspartic-type endopeptidase activity2.31E-03
28GO:0051119: sugar transmembrane transporter activity2.31E-03
29GO:0044212: transcription regulatory region DNA binding5.32E-03
30GO:0000156: phosphorelay response regulator activity5.37E-03
31GO:0016597: amino acid binding6.08E-03
32GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting6.23E-03
33GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding6.93E-03
34GO:0004806: triglyceride lipase activity7.08E-03
35GO:0009055: electron carrier activity8.24E-03
36GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors8.96E-03
37GO:0051287: NAD binding1.23E-02
38GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.52E-02
39GO:0015035: protein disulfide oxidoreductase activity1.73E-02
40GO:0004601: peroxidase activity3.42E-02
41GO:0016788: hydrolase activity, acting on ester bonds3.46E-02
42GO:0016491: oxidoreductase activity3.65E-02
43GO:0043565: sequence-specific DNA binding4.16E-02
44GO:0042803: protein homodimerization activity4.68E-02
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Gene type



Gene DE type