co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G12900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
2	GO:0061635: regulation of protein complex stability	0.00E+00
3	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
4	GO:0015979: photosynthesis	5.27E-25
5	GO:0010196: nonphotochemical quenching	1.36E-09
6	GO:0009768: photosynthesis, light harvesting in photosystem I	1.58E-09
7	GO:0090391: granum assembly	1.79E-09
8	GO:0018298: protein-chromophore linkage	9.91E-08
9	GO:0009735: response to cytokinin	1.85E-07
10	GO:0032544: plastid translation	7.83E-07
11	GO:0018119: peptidyl-cysteine S-nitrosylation	2.70E-06
12	GO:0009773: photosynthetic electron transport in photosystem I	2.70E-06
13	GO:0015995: chlorophyll biosynthetic process	3.55E-06
14	GO:0010218: response to far red light	5.49E-06
15	GO:0009637: response to blue light	7.41E-06
16	GO:0015976: carbon utilization	9.05E-06
17	GO:0010114: response to red light	1.27E-05
18	GO:0009642: response to light intensity	5.73E-05
19	GO:0010206: photosystem II repair	8.98E-05
20	GO:0080093: regulation of photorespiration	1.00E-04
21	GO:0031998: regulation of fatty acid beta-oxidation	1.00E-04
22	GO:0043085: positive regulation of catalytic activity	1.52E-04
23	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.36E-04
24	GO:0042254: ribosome biogenesis	2.75E-04
25	GO:0006518: peptide metabolic process	3.92E-04
26	GO:0016570: histone modification	3.92E-04
27	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	5.64E-04
28	GO:0043207: response to external biotic stimulus	5.64E-04
29	GO:0006412: translation	5.85E-04
30	GO:0006662: glycerol ether metabolic process	6.40E-04
31	GO:2000122: negative regulation of stomatal complex development	7.50E-04
32	GO:0006546: glycine catabolic process	7.50E-04
33	GO:0010037: response to carbon dioxide	7.50E-04
34	GO:0019464: glycine decarboxylation via glycine cleavage system	7.50E-04
35	GO:0009765: photosynthesis, light harvesting	7.50E-04
36	GO:0006109: regulation of carbohydrate metabolic process	7.50E-04
37	GO:0010600: regulation of auxin biosynthetic process	7.50E-04
38	GO:0006097: glyoxylate cycle	9.47E-04
39	GO:0006656: phosphatidylcholine biosynthetic process	9.47E-04
40	GO:0043097: pyrimidine nucleoside salvage	9.47E-04
41	GO:0042742: defense response to bacterium	1.08E-03
42	GO:0010027: thylakoid membrane organization	1.11E-03
43	GO:0050665: hydrogen peroxide biosynthetic process	1.16E-03
44	GO:0006206: pyrimidine nucleobase metabolic process	1.16E-03
45	GO:0009854: oxidative photosynthetic carbon pathway	1.38E-03
46	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.38E-03
47	GO:0009645: response to low light intensity stimulus	1.62E-03
48	GO:0006368: transcription elongation from RNA polymerase II promoter	1.62E-03
49	GO:0009772: photosynthetic electron transport in photosystem II	1.62E-03
50	GO:0009658: chloroplast organization	1.83E-03
51	GO:0010928: regulation of auxin mediated signaling pathway	1.87E-03
52	GO:0034599: cellular response to oxidative stress	1.89E-03
53	GO:0022900: electron transport chain	2.14E-03
54	GO:0080167: response to karrikin	2.40E-03
55	GO:0006783: heme biosynthetic process	2.41E-03
56	GO:0009245: lipid A biosynthetic process	2.41E-03
57	GO:0042761: very long-chain fatty acid biosynthetic process	2.70E-03
58	GO:0006779: porphyrin-containing compound biosynthetic process	2.70E-03
59	GO:0006782: protoporphyrinogen IX biosynthetic process	3.00E-03
60	GO:0045454: cell redox homeostasis	3.01E-03
61	GO:0072593: reactive oxygen species metabolic process	3.31E-03
62	GO:0009698: phenylpropanoid metabolic process	3.31E-03
63	GO:0006108: malate metabolic process	3.95E-03
64	GO:0010207: photosystem II assembly	4.30E-03
65	GO:0009266: response to temperature stimulus	4.30E-03
66	GO:0019253: reductive pentose-phosphate cycle	4.30E-03
67	GO:0006636: unsaturated fatty acid biosynthetic process	5.00E-03
68	GO:0006633: fatty acid biosynthetic process	6.93E-03
69	GO:0040007: growth	6.94E-03
70	GO:0009693: ethylene biosynthetic process	6.94E-03
71	GO:0009409: response to cold	7.48E-03
72	GO:0009416: response to light stimulus	8.12E-03
73	GO:0000413: protein peptidyl-prolyl isomerization	8.21E-03
74	GO:0042631: cellular response to water deprivation	8.21E-03
75	GO:0042335: cuticle development	8.21E-03
76	GO:0015986: ATP synthesis coupled proton transport	9.10E-03
77	GO:0006814: sodium ion transport	9.10E-03
78	GO:0055072: iron ion homeostasis	9.56E-03
79	GO:0009627: systemic acquired resistance	1.40E-02
80	GO:0016311: dephosphorylation	1.51E-02
81	GO:0009817: defense response to fungus, incompatible interaction	1.57E-02
82	GO:0055114: oxidation-reduction process	1.60E-02
83	GO:0010119: regulation of stomatal movement	1.74E-02
84	GO:0007568: aging	1.74E-02
85	GO:0009631: cold acclimation	1.74E-02
86	GO:0006865: amino acid transport	1.80E-02
87	GO:0009853: photorespiration	1.86E-02
88	GO:0006099: tricarboxylic acid cycle	1.91E-02
89	GO:0009644: response to high light intensity	2.35E-02
90	GO:0006812: cation transport	2.61E-02
91	GO:0009585: red, far-red light phototransduction	2.75E-02
92	GO:0043086: negative regulation of catalytic activity	3.09E-02
93	GO:0006810: transport	3.21E-02
94	GO:0009624: response to nematode	3.53E-02
95	GO:0009058: biosynthetic process	4.30E-02
96	GO:0006457: protein folding	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
2	GO:0008974: phosphoribulokinase activity	0.00E+00
3	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
4	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
5	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
6	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
7	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
8	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
9	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
10	GO:0031409: pigment binding	8.59E-10
11	GO:0016168: chlorophyll binding	5.50E-08
12	GO:0051537: 2 iron, 2 sulfur cluster binding	1.49E-05
13	GO:0003735: structural constituent of ribosome	3.98E-05
14	GO:0019843: rRNA binding	7.11E-05
15	GO:0009374: biotin binding	1.00E-04
16	GO:0008047: enzyme activator activity	1.30E-04
17	GO:0004089: carbonate dehydratase activity	2.03E-04
18	GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding	2.36E-04
19	GO:0016630: protochlorophyllide reductase activity	2.36E-04
20	GO:0000234: phosphoethanolamine N-methyltransferase activity	2.36E-04
21	GO:0008883: glutamyl-tRNA reductase activity	2.36E-04
22	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.36E-04
23	GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding	3.92E-04
24	GO:0047134: protein-disulfide reductase activity	5.51E-04
25	GO:0015035: protein disulfide oxidoreductase activity	5.57E-04
26	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	5.64E-04
27	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	5.64E-04
28	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	5.64E-04
29	GO:0004375: glycine dehydrogenase (decarboxylating) activity	5.64E-04
30	GO:0016851: magnesium chelatase activity	5.64E-04
31	GO:0004791: thioredoxin-disulfide reductase activity	6.86E-04
32	GO:0008891: glycolate oxidase activity	7.50E-04
33	GO:0008453: alanine-glyoxylate transaminase activity	7.50E-04
34	GO:0052793: pectin acetylesterase activity	7.50E-04
35	GO:0009055: electron carrier activity	7.63E-04
36	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8.87E-04
37	GO:0003989: acetyl-CoA carboxylase activity	9.47E-04
38	GO:0031177: phosphopantetheine binding	1.16E-03
39	GO:0016615: malate dehydrogenase activity	1.16E-03
40	GO:0004849: uridine kinase activity	1.38E-03
41	GO:0000035: acyl binding	1.38E-03
42	GO:0030060: L-malate dehydrogenase activity	1.38E-03
43	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.87E-03
44	GO:0003993: acid phosphatase activity	1.89E-03
45	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.14E-03
46	GO:0005315: inorganic phosphate transmembrane transporter activity	3.95E-03
47	GO:0031072: heat shock protein binding	3.95E-03
48	GO:0046872: metal ion binding	4.61E-03
49	GO:0004857: enzyme inhibitor activity	5.37E-03
50	GO:0051087: chaperone binding	5.75E-03
51	GO:0043424: protein histidine kinase binding	5.75E-03
52	GO:0016491: oxidoreductase activity	7.18E-03
53	GO:0003756: protein disulfide isomerase activity	7.35E-03
54	GO:0008514: organic anion transmembrane transporter activity	7.35E-03
55	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	8.65E-03
56	GO:0010181: FMN binding	9.10E-03
57	GO:0004222: metalloendopeptidase activity	1.68E-02
58	GO:0005509: calcium ion binding	1.79E-02
59	GO:0050661: NADP binding	2.03E-02
60	GO:0004185: serine-type carboxypeptidase activity	2.22E-02
61	GO:0015293: symporter activity	2.41E-02
62	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.48E-02
63	GO:0005515: protein binding	2.64E-02
64	GO:0015171: amino acid transmembrane transporter activity	2.95E-02
65	GO:0051082: unfolded protein binding	3.53E-02
66	GO:0004252: serine-type endopeptidase activity	4.46E-02
67	GO:0015144: carbohydrate transmembrane transporter activity	4.70E-02