GO Enrichment Analysis of Co-expressed Genes with
AT1G12330
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 2 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 3 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 4 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 5 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 6 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 7 | GO:0051513: regulation of monopolar cell growth | 2.89E-05 |
| 8 | GO:2000038: regulation of stomatal complex development | 5.21E-05 |
| 9 | GO:0032876: negative regulation of DNA endoreduplication | 8.25E-05 |
| 10 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.49E-04 |
| 11 | GO:0046620: regulation of organ growth | 2.73E-04 |
| 12 | GO:0051418: microtubule nucleation by microtubule organizing center | 2.80E-04 |
| 13 | GO:0034080: CENP-A containing nucleosome assembly | 2.80E-04 |
| 14 | GO:0032502: developmental process | 3.71E-04 |
| 15 | GO:0009638: phototropism | 4.79E-04 |
| 16 | GO:0009733: response to auxin | 4.92E-04 |
| 17 | GO:0033566: gamma-tubulin complex localization | 6.14E-04 |
| 18 | GO:0070981: L-asparagine biosynthetic process | 6.14E-04 |
| 19 | GO:0009786: regulation of asymmetric cell division | 6.14E-04 |
| 20 | GO:0006529: asparagine biosynthetic process | 6.14E-04 |
| 21 | GO:2000123: positive regulation of stomatal complex development | 6.14E-04 |
| 22 | GO:0009767: photosynthetic electron transport chain | 8.37E-04 |
| 23 | GO:0071705: nitrogen compound transport | 9.96E-04 |
| 24 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 9.96E-04 |
| 25 | GO:0051604: protein maturation | 9.96E-04 |
| 26 | GO:0016050: vesicle organization | 9.96E-04 |
| 27 | GO:0007052: mitotic spindle organization | 9.96E-04 |
| 28 | GO:0045910: negative regulation of DNA recombination | 9.96E-04 |
| 29 | GO:0040008: regulation of growth | 1.16E-03 |
| 30 | GO:0005992: trehalose biosynthetic process | 1.29E-03 |
| 31 | GO:0044211: CTP salvage | 1.42E-03 |
| 32 | GO:0019048: modulation by virus of host morphology or physiology | 1.42E-03 |
| 33 | GO:0090307: mitotic spindle assembly | 1.42E-03 |
| 34 | GO:0031048: chromatin silencing by small RNA | 1.42E-03 |
| 35 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 1.42E-03 |
| 36 | GO:0046739: transport of virus in multicellular host | 1.42E-03 |
| 37 | GO:2000904: regulation of starch metabolic process | 1.42E-03 |
| 38 | GO:0034508: centromere complex assembly | 1.42E-03 |
| 39 | GO:0009067: aspartate family amino acid biosynthetic process | 1.42E-03 |
| 40 | GO:0007231: osmosensory signaling pathway | 1.42E-03 |
| 41 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 1.42E-03 |
| 42 | GO:0051639: actin filament network formation | 1.42E-03 |
| 43 | GO:0006468: protein phosphorylation | 1.57E-03 |
| 44 | GO:0022622: root system development | 1.91E-03 |
| 45 | GO:0051567: histone H3-K9 methylation | 1.91E-03 |
| 46 | GO:0044206: UMP salvage | 1.91E-03 |
| 47 | GO:0033500: carbohydrate homeostasis | 1.91E-03 |
| 48 | GO:0051764: actin crosslink formation | 1.91E-03 |
| 49 | GO:0071249: cellular response to nitrate | 1.91E-03 |
| 50 | GO:0030308: negative regulation of cell growth | 2.43E-03 |
| 51 | GO:0010375: stomatal complex patterning | 2.43E-03 |
| 52 | GO:1902183: regulation of shoot apical meristem development | 2.43E-03 |
| 53 | GO:0016123: xanthophyll biosynthetic process | 2.43E-03 |
| 54 | GO:0010158: abaxial cell fate specification | 2.43E-03 |
| 55 | GO:0009734: auxin-activated signaling pathway | 2.64E-03 |
| 56 | GO:0006206: pyrimidine nucleobase metabolic process | 3.00E-03 |
| 57 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.00E-03 |
| 58 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.00E-03 |
| 59 | GO:0016458: gene silencing | 3.00E-03 |
| 60 | GO:0010405: arabinogalactan protein metabolic process | 3.00E-03 |
| 61 | GO:0009959: negative gravitropism | 3.00E-03 |
| 62 | GO:0080167: response to karrikin | 3.36E-03 |
| 63 | GO:0009742: brassinosteroid mediated signaling pathway | 3.49E-03 |
| 64 | GO:0030488: tRNA methylation | 3.62E-03 |
| 65 | GO:0009088: threonine biosynthetic process | 3.62E-03 |
| 66 | GO:2000037: regulation of stomatal complex patterning | 3.62E-03 |
| 67 | GO:0010252: auxin homeostasis | 3.80E-03 |
| 68 | GO:0010050: vegetative phase change | 4.26E-03 |
| 69 | GO:0032880: regulation of protein localization | 4.26E-03 |
| 70 | GO:0010161: red light signaling pathway | 4.26E-03 |
| 71 | GO:0009610: response to symbiotic fungus | 4.26E-03 |
| 72 | GO:0051607: defense response to virus | 4.28E-03 |
| 73 | GO:0009058: biosynthetic process | 4.61E-03 |
| 74 | GO:0042255: ribosome assembly | 4.95E-03 |
| 75 | GO:0009850: auxin metabolic process | 4.95E-03 |
| 76 | GO:0032875: regulation of DNA endoreduplication | 4.95E-03 |
| 77 | GO:0009827: plant-type cell wall modification | 5.67E-03 |
| 78 | GO:0010497: plasmodesmata-mediated intercellular transport | 5.67E-03 |
| 79 | GO:0010100: negative regulation of photomorphogenesis | 5.67E-03 |
| 80 | GO:0007389: pattern specification process | 5.67E-03 |
| 81 | GO:0010099: regulation of photomorphogenesis | 5.67E-03 |
| 82 | GO:0000160: phosphorelay signal transduction system | 6.21E-03 |
| 83 | GO:0009051: pentose-phosphate shunt, oxidative branch | 6.43E-03 |
| 84 | GO:2000024: regulation of leaf development | 6.43E-03 |
| 85 | GO:0006783: heme biosynthetic process | 6.43E-03 |
| 86 | GO:0000902: cell morphogenesis | 6.43E-03 |
| 87 | GO:0007623: circadian rhythm | 6.50E-03 |
| 88 | GO:0031425: chloroplast RNA processing | 7.22E-03 |
| 89 | GO:0006535: cysteine biosynthetic process from serine | 8.04E-03 |
| 90 | GO:0030422: production of siRNA involved in RNA interference | 8.04E-03 |
| 91 | GO:0048829: root cap development | 8.04E-03 |
| 92 | GO:0009641: shade avoidance | 8.04E-03 |
| 93 | GO:0006298: mismatch repair | 8.04E-03 |
| 94 | GO:0006816: calcium ion transport | 8.90E-03 |
| 95 | GO:0009773: photosynthetic electron transport in photosystem I | 8.90E-03 |
| 96 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.90E-03 |
| 97 | GO:0010015: root morphogenesis | 8.90E-03 |
| 98 | GO:0016310: phosphorylation | 8.93E-03 |
| 99 | GO:0009926: auxin polar transport | 9.67E-03 |
| 100 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.79E-03 |
| 101 | GO:0010582: floral meristem determinacy | 9.79E-03 |
| 102 | GO:0015706: nitrate transport | 9.79E-03 |
| 103 | GO:0008361: regulation of cell size | 9.79E-03 |
| 104 | GO:2000012: regulation of auxin polar transport | 1.07E-02 |
| 105 | GO:0009785: blue light signaling pathway | 1.07E-02 |
| 106 | GO:0010628: positive regulation of gene expression | 1.07E-02 |
| 107 | GO:0006006: glucose metabolic process | 1.07E-02 |
| 108 | GO:0006855: drug transmembrane transport | 1.13E-02 |
| 109 | GO:0006541: glutamine metabolic process | 1.17E-02 |
| 110 | GO:0010207: photosystem II assembly | 1.17E-02 |
| 111 | GO:0010167: response to nitrate | 1.26E-02 |
| 112 | GO:0090351: seedling development | 1.26E-02 |
| 113 | GO:0070588: calcium ion transmembrane transport | 1.26E-02 |
| 114 | GO:0009736: cytokinin-activated signaling pathway | 1.31E-02 |
| 115 | GO:0000162: tryptophan biosynthetic process | 1.37E-02 |
| 116 | GO:0006071: glycerol metabolic process | 1.37E-02 |
| 117 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.47E-02 |
| 118 | GO:0010187: negative regulation of seed germination | 1.47E-02 |
| 119 | GO:0051017: actin filament bundle assembly | 1.47E-02 |
| 120 | GO:0019344: cysteine biosynthetic process | 1.47E-02 |
| 121 | GO:0006825: copper ion transport | 1.58E-02 |
| 122 | GO:0006306: DNA methylation | 1.68E-02 |
| 123 | GO:0009740: gibberellic acid mediated signaling pathway | 1.76E-02 |
| 124 | GO:0006730: one-carbon metabolic process | 1.80E-02 |
| 125 | GO:0031348: negative regulation of defense response | 1.80E-02 |
| 126 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.91E-02 |
| 127 | GO:0009686: gibberellin biosynthetic process | 1.91E-02 |
| 128 | GO:0010082: regulation of root meristem growth | 1.91E-02 |
| 129 | GO:0006284: base-excision repair | 2.03E-02 |
| 130 | GO:0008284: positive regulation of cell proliferation | 2.15E-02 |
| 131 | GO:0042631: cellular response to water deprivation | 2.27E-02 |
| 132 | GO:0000226: microtubule cytoskeleton organization | 2.27E-02 |
| 133 | GO:0010087: phloem or xylem histogenesis | 2.27E-02 |
| 134 | GO:0009958: positive gravitropism | 2.39E-02 |
| 135 | GO:0006342: chromatin silencing | 2.39E-02 |
| 136 | GO:0009741: response to brassinosteroid | 2.39E-02 |
| 137 | GO:0048544: recognition of pollen | 2.52E-02 |
| 138 | GO:0009646: response to absence of light | 2.52E-02 |
| 139 | GO:0008654: phospholipid biosynthetic process | 2.65E-02 |
| 140 | GO:0009851: auxin biosynthetic process | 2.65E-02 |
| 141 | GO:0005975: carbohydrate metabolic process | 2.75E-02 |
| 142 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.78E-02 |
| 143 | GO:0071554: cell wall organization or biogenesis | 2.78E-02 |
| 144 | GO:0071281: cellular response to iron ion | 3.05E-02 |
| 145 | GO:0010090: trichome morphogenesis | 3.05E-02 |
| 146 | GO:0009451: RNA modification | 3.30E-02 |
| 147 | GO:0007267: cell-cell signaling | 3.33E-02 |
| 148 | GO:0006508: proteolysis | 3.62E-02 |
| 149 | GO:0007166: cell surface receptor signaling pathway | 3.68E-02 |
| 150 | GO:0010029: regulation of seed germination | 3.76E-02 |
| 151 | GO:0009816: defense response to bacterium, incompatible interaction | 3.76E-02 |
| 152 | GO:0015995: chlorophyll biosynthetic process | 4.06E-02 |
| 153 | GO:0010411: xyloglucan metabolic process | 4.06E-02 |
| 154 | GO:0071555: cell wall organization | 4.10E-02 |
| 155 | GO:0010311: lateral root formation | 4.52E-02 |
| 156 | GO:0007165: signal transduction | 4.63E-02 |
| 157 | GO:0030154: cell differentiation | 4.63E-02 |
| 158 | GO:0048527: lateral root development | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
| 2 | GO:0016301: kinase activity | 1.29E-04 |
| 3 | GO:0004008: copper-exporting ATPase activity | 2.80E-04 |
| 4 | GO:0004071: aspartate-ammonia ligase activity | 2.80E-04 |
| 5 | GO:0010313: phytochrome binding | 2.80E-04 |
| 6 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 2.80E-04 |
| 7 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.80E-04 |
| 8 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 2.80E-04 |
| 9 | GO:0004805: trehalose-phosphatase activity | 5.60E-04 |
| 10 | GO:0015929: hexosaminidase activity | 6.14E-04 |
| 11 | GO:0004563: beta-N-acetylhexosaminidase activity | 6.14E-04 |
| 12 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 6.14E-04 |
| 13 | GO:0050017: L-3-cyanoalanine synthase activity | 6.14E-04 |
| 14 | GO:0004672: protein kinase activity | 9.42E-04 |
| 15 | GO:0070180: large ribosomal subunit rRNA binding | 9.96E-04 |
| 16 | GO:0004674: protein serine/threonine kinase activity | 1.01E-03 |
| 17 | GO:0035197: siRNA binding | 1.42E-03 |
| 18 | GO:0017172: cysteine dioxygenase activity | 1.42E-03 |
| 19 | GO:0004072: aspartate kinase activity | 1.42E-03 |
| 20 | GO:0030246: carbohydrate binding | 1.88E-03 |
| 21 | GO:0043015: gamma-tubulin binding | 1.91E-03 |
| 22 | GO:0019199: transmembrane receptor protein kinase activity | 1.91E-03 |
| 23 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.91E-03 |
| 24 | GO:0004834: tryptophan synthase activity | 1.91E-03 |
| 25 | GO:0004845: uracil phosphoribosyltransferase activity | 1.91E-03 |
| 26 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.91E-03 |
| 27 | GO:0003727: single-stranded RNA binding | 2.02E-03 |
| 28 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.43E-03 |
| 29 | GO:0004650: polygalacturonase activity | 2.88E-03 |
| 30 | GO:0030983: mismatched DNA binding | 3.00E-03 |
| 31 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.00E-03 |
| 32 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.00E-03 |
| 33 | GO:0000156: phosphorelay response regulator activity | 3.57E-03 |
| 34 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.62E-03 |
| 35 | GO:0004849: uridine kinase activity | 3.62E-03 |
| 36 | GO:0004656: procollagen-proline 4-dioxygenase activity | 3.62E-03 |
| 37 | GO:0004124: cysteine synthase activity | 3.62E-03 |
| 38 | GO:0019899: enzyme binding | 4.26E-03 |
| 39 | GO:0016829: lyase activity | 4.76E-03 |
| 40 | GO:0004252: serine-type endopeptidase activity | 4.92E-03 |
| 41 | GO:0005375: copper ion transmembrane transporter activity | 5.67E-03 |
| 42 | GO:0015238: drug transmembrane transporter activity | 6.21E-03 |
| 43 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 6.43E-03 |
| 44 | GO:0009672: auxin:proton symporter activity | 7.22E-03 |
| 45 | GO:0005524: ATP binding | 8.67E-03 |
| 46 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 8.90E-03 |
| 47 | GO:0008327: methyl-CpG binding | 8.90E-03 |
| 48 | GO:0004521: endoribonuclease activity | 9.79E-03 |
| 49 | GO:0043621: protein self-association | 1.05E-02 |
| 50 | GO:0010329: auxin efflux transmembrane transporter activity | 1.07E-02 |
| 51 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.07E-02 |
| 52 | GO:0004089: carbonate dehydratase activity | 1.07E-02 |
| 53 | GO:0031072: heat shock protein binding | 1.07E-02 |
| 54 | GO:0005262: calcium channel activity | 1.07E-02 |
| 55 | GO:0008083: growth factor activity | 1.17E-02 |
| 56 | GO:0004190: aspartic-type endopeptidase activity | 1.26E-02 |
| 57 | GO:0031418: L-ascorbic acid binding | 1.47E-02 |
| 58 | GO:0004857: enzyme inhibitor activity | 1.47E-02 |
| 59 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.58E-02 |
| 60 | GO:0005215: transporter activity | 1.61E-02 |
| 61 | GO:0035251: UDP-glucosyltransferase activity | 1.68E-02 |
| 62 | GO:0004176: ATP-dependent peptidase activity | 1.68E-02 |
| 63 | GO:0008514: organic anion transmembrane transporter activity | 2.03E-02 |
| 64 | GO:0046983: protein dimerization activity | 2.22E-02 |
| 65 | GO:0019901: protein kinase binding | 2.65E-02 |
| 66 | GO:0004519: endonuclease activity | 2.71E-02 |
| 67 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.78E-02 |
| 68 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.01E-02 |
| 69 | GO:0051015: actin filament binding | 3.05E-02 |
| 70 | GO:0015297: antiporter activity | 3.08E-02 |
| 71 | GO:0003684: damaged DNA binding | 3.19E-02 |
| 72 | GO:0016759: cellulose synthase activity | 3.19E-02 |
| 73 | GO:0008483: transaminase activity | 3.33E-02 |
| 74 | GO:0016597: amino acid binding | 3.47E-02 |
| 75 | GO:0016413: O-acetyltransferase activity | 3.47E-02 |
| 76 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.06E-02 |
| 77 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 4.21E-02 |
| 78 | GO:0008236: serine-type peptidase activity | 4.21E-02 |
| 79 | GO:0008168: methyltransferase activity | 4.78E-02 |