co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G12230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017038: protein import	0.00E+00
2	GO:0016553: base conversion or substitution editing	0.00E+00
3	GO:0090279: regulation of calcium ion import	0.00E+00
4	GO:0042817: pyridoxal metabolic process	0.00E+00
5	GO:0071474: cellular hyperosmotic response	0.00E+00
6	GO:0002184: cytoplasmic translational termination	0.00E+00
7	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
8	GO:0042407: cristae formation	0.00E+00
9	GO:0015882: L-ascorbic acid transport	0.00E+00
10	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
11	GO:0015995: chlorophyll biosynthetic process	1.09E-16
12	GO:0006782: protoporphyrinogen IX biosynthetic process	3.76E-08
13	GO:0006783: heme biosynthetic process	2.21E-06
14	GO:0006779: porphyrin-containing compound biosynthetic process	3.03E-06
15	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	1.33E-04
16	GO:0043489: RNA stabilization	1.33E-04
17	GO:0015671: oxygen transport	1.33E-04
18	GO:0000481: maturation of 5S rRNA	1.33E-04
19	GO:0010028: xanthophyll cycle	1.33E-04
20	GO:0034337: RNA folding	1.33E-04
21	GO:0018026: peptidyl-lysine monomethylation	3.07E-04
22	GO:0051262: protein tetramerization	3.07E-04
23	GO:0006739: NADP metabolic process	3.07E-04
24	GO:0006423: cysteinyl-tRNA aminoacylation	3.07E-04
25	GO:0006435: threonyl-tRNA aminoacylation	3.07E-04
26	GO:0034051: negative regulation of plant-type hypersensitive response	5.06E-04
27	GO:0080055: low-affinity nitrate transport	5.06E-04
28	GO:0051604: protein maturation	5.06E-04
29	GO:0000913: preprophase band assembly	5.06E-04
30	GO:0033591: response to L-ascorbic acid	5.06E-04
31	GO:0031022: nuclear migration along microfilament	5.06E-04
32	GO:0007017: microtubule-based process	5.22E-04
33	GO:0009735: response to cytokinin	5.32E-04
34	GO:0009052: pentose-phosphate shunt, non-oxidative branch	7.24E-04
35	GO:0033014: tetrapyrrole biosynthetic process	7.24E-04
36	GO:0008615: pyridoxine biosynthetic process	7.24E-04
37	GO:0006424: glutamyl-tRNA aminoacylation	7.24E-04
38	GO:0006020: inositol metabolic process	7.24E-04
39	GO:0009102: biotin biosynthetic process	7.24E-04
40	GO:1901000: regulation of response to salt stress	7.24E-04
41	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	7.24E-04
42	GO:0015979: photosynthesis	8.36E-04
43	GO:0006021: inositol biosynthetic process	9.59E-04
44	GO:0006734: NADH metabolic process	9.59E-04
45	GO:0010109: regulation of photosynthesis	9.59E-04
46	GO:0009765: photosynthesis, light harvesting	9.59E-04
47	GO:0032543: mitochondrial translation	1.21E-03
48	GO:0009904: chloroplast accumulation movement	1.21E-03
49	GO:0016123: xanthophyll biosynthetic process	1.21E-03
50	GO:0016120: carotene biosynthetic process	1.21E-03
51	GO:0000304: response to singlet oxygen	1.21E-03
52	GO:0010190: cytochrome b6f complex assembly	1.49E-03
53	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.49E-03
54	GO:0045962: positive regulation of development, heterochronic	1.49E-03
55	GO:0046855: inositol phosphate dephosphorylation	1.49E-03
56	GO:0010027: thylakoid membrane organization	1.61E-03
57	GO:0009903: chloroplast avoidance movement	1.78E-03
58	GO:0030488: tRNA methylation	1.78E-03
59	GO:0009854: oxidative photosynthetic carbon pathway	1.78E-03
60	GO:1901259: chloroplast rRNA processing	1.78E-03
61	GO:0006605: protein targeting	2.42E-03
62	GO:0032508: DNA duplex unwinding	2.42E-03
63	GO:2000070: regulation of response to water deprivation	2.42E-03
64	GO:0032544: plastid translation	2.77E-03
65	GO:0098656: anion transmembrane transport	3.13E-03
66	GO:0006631: fatty acid metabolic process	3.13E-03
67	GO:0019432: triglyceride biosynthetic process	3.13E-03
68	GO:0043067: regulation of programmed cell death	3.50E-03
69	GO:0031425: chloroplast RNA processing	3.50E-03
70	GO:0009773: photosynthetic electron transport in photosystem I	4.30E-03
71	GO:0006790: sulfur compound metabolic process	4.72E-03
72	GO:0010207: photosystem II assembly	5.60E-03
73	GO:0046854: phosphatidylinositol phosphorylation	6.06E-03
74	GO:0006396: RNA processing	6.67E-03
75	GO:0006397: mRNA processing	6.76E-03
76	GO:0006289: nucleotide-excision repair	7.01E-03
77	GO:0010073: meristem maintenance	7.51E-03
78	GO:0031408: oxylipin biosynthetic process	8.02E-03
79	GO:0016114: terpenoid biosynthetic process	8.02E-03
80	GO:0048511: rhythmic process	8.02E-03
81	GO:0010431: seed maturation	8.02E-03
82	GO:0016226: iron-sulfur cluster assembly	8.55E-03
83	GO:0019748: secondary metabolic process	8.55E-03
84	GO:0035428: hexose transmembrane transport	8.55E-03
85	GO:0055114: oxidation-reduction process	8.76E-03
86	GO:0051028: mRNA transport	1.02E-02
87	GO:0016117: carotenoid biosynthetic process	1.02E-02
88	GO:0006633: fatty acid biosynthetic process	1.02E-02
89	GO:0010197: polar nucleus fusion	1.13E-02
90	GO:0046323: glucose import	1.13E-02
91	GO:0009741: response to brassinosteroid	1.13E-02
92	GO:0009451: RNA modification	1.15E-02
93	GO:0010228: vegetative to reproductive phase transition of meristem	1.17E-02
94	GO:0007018: microtubule-based movement	1.19E-02
95	GO:0042752: regulation of circadian rhythm	1.19E-02
96	GO:0009646: response to absence of light	1.19E-02
97	GO:0015031: protein transport	1.23E-02
98	GO:0016032: viral process	1.38E-02
99	GO:0010090: trichome morphogenesis	1.44E-02
100	GO:0005975: carbohydrate metabolic process	1.60E-02
101	GO:0000910: cytokinesis	1.64E-02
102	GO:0016126: sterol biosynthetic process	1.71E-02
103	GO:0009658: chloroplast organization	1.74E-02
104	GO:0042254: ribosome biogenesis	1.77E-02
105	GO:0009817: defense response to fungus, incompatible interaction	2.06E-02
106	GO:0009813: flavonoid biosynthetic process	2.14E-02
107	GO:0016192: vesicle-mediated transport	2.27E-02
108	GO:0009631: cold acclimation	2.29E-02
109	GO:0045087: innate immune response	2.44E-02
110	GO:0009853: photorespiration	2.44E-02
111	GO:0006886: intracellular protein transport	2.67E-02
112	GO:0009965: leaf morphogenesis	3.18E-02
113	GO:0006364: rRNA processing	3.62E-02
114	GO:0006412: translation	3.67E-02
115	GO:0006857: oligopeptide transport	3.80E-02
116	GO:0006096: glycolytic process	4.07E-02
117	GO:0006508: proteolysis	4.50E-02
118	GO:0009409: response to cold	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0008887: glycerate kinase activity	0.00E+00
2	GO:0050613: delta14-sterol reductase activity	0.00E+00
3	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
4	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
5	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
6	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
7	GO:0004076: biotin synthase activity	0.00E+00
8	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
9	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
10	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
11	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
12	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
13	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
14	GO:0016851: magnesium chelatase activity	7.85E-06
15	GO:0004856: xylulokinase activity	1.33E-04
16	GO:0005080: protein kinase C binding	1.33E-04
17	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	1.33E-04
18	GO:0052857: NADPHX epimerase activity	1.33E-04
19	GO:0005344: oxygen transporter activity	1.33E-04
20	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	1.33E-04
21	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.33E-04
22	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	1.33E-04
23	GO:0005227: calcium activated cation channel activity	1.33E-04
24	GO:0004733: pyridoxamine-phosphate oxidase activity	1.33E-04
25	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	1.33E-04
26	GO:0004325: ferrochelatase activity	1.33E-04
27	GO:0052856: NADHX epimerase activity	1.33E-04
28	GO:0016630: protochlorophyllide reductase activity	3.07E-04
29	GO:0004829: threonine-tRNA ligase activity	3.07E-04
30	GO:0052832: inositol monophosphate 3-phosphatase activity	3.07E-04
31	GO:0004817: cysteine-tRNA ligase activity	3.07E-04
32	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.07E-04
33	GO:0008934: inositol monophosphate 1-phosphatase activity	3.07E-04
34	GO:0052833: inositol monophosphate 4-phosphatase activity	3.07E-04
35	GO:0008266: poly(U) RNA binding	3.42E-04
36	GO:0003723: RNA binding	4.74E-04
37	GO:0005504: fatty acid binding	5.06E-04
38	GO:0004751: ribose-5-phosphate isomerase activity	5.06E-04
39	GO:0080054: low-affinity nitrate transmembrane transporter activity	5.06E-04
40	GO:0015462: ATPase-coupled protein transmembrane transporter activity	5.06E-04
41	GO:0043023: ribosomal large subunit binding	7.24E-04
42	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	7.24E-04
43	GO:0070628: proteasome binding	9.59E-04
44	GO:0045430: chalcone isomerase activity	9.59E-04
45	GO:0016279: protein-lysine N-methyltransferase activity	9.59E-04
46	GO:0019843: rRNA binding	1.15E-03
47	GO:0003959: NADPH dehydrogenase activity	1.21E-03
48	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.21E-03
49	GO:0005200: structural constituent of cytoskeleton	1.44E-03
50	GO:0031593: polyubiquitin binding	1.49E-03
51	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.78E-03
52	GO:0005261: cation channel activity	1.78E-03
53	GO:0009927: histidine phosphotransfer kinase activity	1.78E-03
54	GO:0016887: ATPase activity	2.38E-03
55	GO:0008173: RNA methyltransferase activity	2.77E-03
56	GO:0016491: oxidoreductase activity	3.46E-03
57	GO:0030955: potassium ion binding	3.50E-03
58	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.50E-03
59	GO:0004743: pyruvate kinase activity	3.50E-03
60	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.95E-03
61	GO:0003729: mRNA binding	4.29E-03
62	GO:0005315: inorganic phosphate transmembrane transporter activity	5.15E-03
63	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.60E-03
64	GO:0005525: GTP binding	6.22E-03
65	GO:0051536: iron-sulfur cluster binding	7.01E-03
66	GO:0043130: ubiquitin binding	7.01E-03
67	GO:0005528: FK506 binding	7.01E-03
68	GO:0051087: chaperone binding	7.51E-03
69	GO:0008514: organic anion transmembrane transporter activity	9.63E-03
70	GO:0008080: N-acetyltransferase activity	1.13E-02
71	GO:0005355: glucose transmembrane transporter activity	1.19E-02
72	GO:0010181: FMN binding	1.19E-02
73	GO:0003684: damaged DNA binding	1.51E-02
74	GO:0008483: transaminase activity	1.57E-02
75	GO:0016740: transferase activity	1.71E-02
76	GO:0008236: serine-type peptidase activity	1.99E-02
77	GO:0005507: copper ion binding	2.08E-02
78	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.29E-02
79	GO:0003735: structural constituent of ribosome	2.39E-02
80	GO:0003746: translation elongation factor activity	2.44E-02
81	GO:0016787: hydrolase activity	2.67E-02
82	GO:0051539: 4 iron, 4 sulfur cluster binding	2.68E-02
83	GO:0042803: protein homodimerization activity	2.71E-02
84	GO:0004185: serine-type carboxypeptidase activity	2.92E-02
85	GO:0051537: 2 iron, 2 sulfur cluster binding	3.09E-02
86	GO:0003924: GTPase activity	3.19E-02
87	GO:0005524: ATP binding	3.69E-02
88	GO:0003777: microtubule motor activity	3.89E-02
89	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.17E-02
90	GO:0004650: polygalacturonase activity	4.36E-02