co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G12090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
2	GO:0061635: regulation of protein complex stability	0.00E+00
3	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
4	GO:0015979: photosynthesis	2.70E-22
5	GO:0009768: photosynthesis, light harvesting in photosystem I	2.56E-11
6	GO:0010196: nonphotochemical quenching	2.34E-09
7	GO:0090391: granum assembly	2.76E-09
8	GO:0018298: protein-chromophore linkage	3.61E-09
9	GO:0032544: plastid translation	7.21E-09
10	GO:0018119: peptidyl-cysteine S-nitrosylation	4.07E-06
11	GO:0009773: photosynthetic electron transport in photosystem I	4.07E-06
12	GO:0015995: chlorophyll biosynthetic process	5.88E-06
13	GO:0009735: response to cytokinin	6.25E-06
14	GO:0010218: response to far red light	9.01E-06
15	GO:0009637: response to blue light	1.21E-05
16	GO:0010114: response to red light	2.04E-05
17	GO:0009645: response to low light intensity stimulus	5.77E-05
18	GO:0010206: photosystem II repair	1.17E-04
19	GO:0080093: regulation of photorespiration	1.20E-04
20	GO:0031998: regulation of fatty acid beta-oxidation	1.20E-04
21	GO:0006810: transport	1.89E-04
22	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.77E-04
23	GO:0019253: reductive pentose-phosphate cycle	2.94E-04
24	GO:0006412: translation	3.17E-04
25	GO:0042254: ribosome biogenesis	4.02E-04
26	GO:0006518: peptide metabolic process	4.58E-04
27	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	6.57E-04
28	GO:0043207: response to external biotic stimulus	6.57E-04
29	GO:0006546: glycine catabolic process	8.72E-04
30	GO:0015976: carbon utilization	8.72E-04
31	GO:0019464: glycine decarboxylation via glycine cleavage system	8.72E-04
32	GO:0009765: photosynthesis, light harvesting	8.72E-04
33	GO:0015994: chlorophyll metabolic process	8.72E-04
34	GO:0010600: regulation of auxin biosynthetic process	8.72E-04
35	GO:0006097: glyoxylate cycle	1.10E-03
36	GO:0006656: phosphatidylcholine biosynthetic process	1.10E-03
37	GO:0043097: pyrimidine nucleoside salvage	1.10E-03
38	GO:0010190: cytochrome b6f complex assembly	1.35E-03
39	GO:0050665: hydrogen peroxide biosynthetic process	1.35E-03
40	GO:0006206: pyrimidine nucleobase metabolic process	1.35E-03
41	GO:0010027: thylakoid membrane organization	1.39E-03
42	GO:0009854: oxidative photosynthetic carbon pathway	1.61E-03
43	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.61E-03
44	GO:0010928: regulation of auxin mediated signaling pathway	2.19E-03
45	GO:0009642: response to light intensity	2.19E-03
46	GO:0009416: response to light stimulus	2.32E-03
47	GO:0009658: chloroplast organization	2.46E-03
48	GO:0022900: electron transport chain	2.50E-03
49	GO:0006783: heme biosynthetic process	2.82E-03
50	GO:0009245: lipid A biosynthetic process	2.82E-03
51	GO:0042761: very long-chain fatty acid biosynthetic process	3.16E-03
52	GO:0006779: porphyrin-containing compound biosynthetic process	3.16E-03
53	GO:0009644: response to high light intensity	3.16E-03
54	GO:0080167: response to karrikin	3.23E-03
55	GO:0006782: protoporphyrinogen IX biosynthetic process	3.51E-03
56	GO:0072593: reactive oxygen species metabolic process	3.88E-03
57	GO:0043085: positive regulation of catalytic activity	3.88E-03
58	GO:0009698: phenylpropanoid metabolic process	3.88E-03
59	GO:0006108: malate metabolic process	4.64E-03
60	GO:0006006: glucose metabolic process	4.64E-03
61	GO:0009767: photosynthetic electron transport chain	4.64E-03
62	GO:0010207: photosystem II assembly	5.04E-03
63	GO:0009266: response to temperature stimulus	5.04E-03
64	GO:0006636: unsaturated fatty acid biosynthetic process	5.88E-03
65	GO:0042742: defense response to bacterium	6.77E-03
66	GO:0009693: ethylene biosynthetic process	8.18E-03
67	GO:0006633: fatty acid biosynthetic process	8.77E-03
68	GO:0010150: leaf senescence	9.64E-03
69	GO:0000413: protein peptidyl-prolyl isomerization	9.68E-03
70	GO:0006606: protein import into nucleus	9.68E-03
71	GO:0042335: cuticle development	9.68E-03
72	GO:0006662: glycerol ether metabolic process	1.02E-02
73	GO:0009409: response to cold	1.07E-02
74	GO:0006814: sodium ion transport	1.07E-02
75	GO:0055072: iron ion homeostasis	1.13E-02
76	GO:0055114: oxidation-reduction process	1.29E-02
77	GO:0009627: systemic acquired resistance	1.66E-02
78	GO:0016311: dephosphorylation	1.79E-02
79	GO:0007568: aging	2.05E-02
80	GO:0006865: amino acid transport	2.12E-02
81	GO:0009853: photorespiration	2.19E-02
82	GO:0045454: cell redox homeostasis	2.23E-02
83	GO:0034599: cellular response to oxidative stress	2.26E-02
84	GO:0006099: tricarboxylic acid cycle	2.26E-02
85	GO:0006812: cation transport	3.09E-02
86	GO:0009585: red, far-red light phototransduction	3.25E-02
87	GO:0006096: glycolytic process	3.66E-02
88	GO:0009624: response to nematode	4.17E-02

Rank	GO Term	Adjusted P value
1	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
2	GO:0008974: phosphoribulokinase activity	0.00E+00
3	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
4	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
5	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
6	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
7	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
8	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
9	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
10	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
11	GO:0031409: pigment binding	1.22E-11
12	GO:0016168: chlorophyll binding	1.79E-09
13	GO:0003735: structural constituent of ribosome	1.34E-05
14	GO:0051537: 2 iron, 2 sulfur cluster binding	2.40E-05
15	GO:0019843: rRNA binding	1.09E-04
16	GO:0009374: biotin binding	1.20E-04
17	GO:0016630: protochlorophyllide reductase activity	2.77E-04
18	GO:0000234: phosphoethanolamine N-methyltransferase activity	2.77E-04
19	GO:0008883: glutamyl-tRNA reductase activity	2.77E-04
20	GO:0047746: chlorophyllase activity	2.77E-04
21	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.77E-04
22	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	2.77E-04
23	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.58E-04
24	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	6.57E-04
25	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	6.57E-04
26	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	6.57E-04
27	GO:0004375: glycine dehydrogenase (decarboxylating) activity	6.57E-04
28	GO:0016851: magnesium chelatase activity	6.57E-04
29	GO:0016491: oxidoreductase activity	6.63E-04
30	GO:0008891: glycolate oxidase activity	8.72E-04
31	GO:0008453: alanine-glyoxylate transaminase activity	8.72E-04
32	GO:0052793: pectin acetylesterase activity	8.72E-04
33	GO:0048038: quinone binding	9.78E-04
34	GO:0009055: electron carrier activity	1.09E-03
35	GO:0003989: acetyl-CoA carboxylase activity	1.10E-03
36	GO:0031177: phosphopantetheine binding	1.35E-03
37	GO:0016615: malate dehydrogenase activity	1.35E-03
38	GO:0004849: uridine kinase activity	1.61E-03
39	GO:0000035: acyl binding	1.61E-03
40	GO:0030060: L-malate dehydrogenase activity	1.61E-03
41	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.19E-03
42	GO:0003993: acid phosphatase activity	2.38E-03
43	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.50E-03
44	GO:0050661: NADP binding	2.59E-03
45	GO:0030234: enzyme regulator activity	3.51E-03
46	GO:0008047: enzyme activator activity	3.51E-03
47	GO:0046872: metal ion binding	4.08E-03
48	GO:0005315: inorganic phosphate transmembrane transporter activity	4.64E-03
49	GO:0004089: carbonate dehydratase activity	4.64E-03
50	GO:0031072: heat shock protein binding	4.64E-03
51	GO:0015035: protein disulfide oxidoreductase activity	5.75E-03
52	GO:0051087: chaperone binding	6.76E-03
53	GO:0043424: protein histidine kinase binding	6.76E-03
54	GO:0003756: protein disulfide isomerase activity	8.66E-03
55	GO:0008514: organic anion transmembrane transporter activity	8.66E-03
56	GO:0047134: protein-disulfide reductase activity	9.17E-03
57	GO:0004791: thioredoxin-disulfide reductase activity	1.07E-02
58	GO:0010181: FMN binding	1.07E-02
59	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.30E-02
60	GO:0043531: ADP binding	1.64E-02
61	GO:0004222: metalloendopeptidase activity	1.99E-02
62	GO:0005509: calcium ion binding	2.42E-02
63	GO:0004185: serine-type carboxypeptidase activity	2.63E-02
64	GO:0015293: symporter activity	2.85E-02
65	GO:0005515: protein binding	2.92E-02
66	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.93E-02
67	GO:0051287: NAD binding	3.01E-02
68	GO:0015171: amino acid transmembrane transporter activity	3.49E-02
69	GO:0051082: unfolded protein binding	4.17E-02